RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
CDK5RAP3-233ENST00000584186 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.1
CDK5RAP3-233ENST00000584186 ZMYM4Q5VZL5 1548 aa21.88■■□□□ 1.09
CDK5RAP3-233ENST00000584186 ZFYVE16Q7Z3T8 1539 aa21.88■■□□□ 1.09
CDK5RAP3-233ENST00000584186 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
CDK5RAP3-233ENST00000584186 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
CDK5RAP3-233ENST00000584186 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
CDK5RAP3-233ENST00000584186 ADAMTSL3P82987 1691 aa21.83■■□□□ 1.09
CDK5RAP3-233ENST00000584186 AFAP1Q8N556 730 aa21.83■■□□□ 1.09
CDK5RAP3-233ENST00000584186 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
CDK5RAP3-233ENST00000584186 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.08
CDK5RAP3-233ENST00000584186 BCORL1Q5H9F3 1711 aa21.82■■□□□ 1.08
CDK5RAP3-233ENST00000584186 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
CDK5RAP3-233ENST00000584186 ZNF518AQ6AHZ1 1483 aa21.81■■□□□ 1.08
CDK5RAP3-233ENST00000584186 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-233ENST00000584186 PTPRMP28827 1452 aa21.79■■□□□ 1.08
CDK5RAP3-233ENST00000584186 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
CDK5RAP3-233ENST00000584186 MLECQ14165 292 aa21.79■■□□□ 1.08
CDK5RAP3-233ENST00000584186 MADDQ8WXG6 1647 aa21.78■■□□□ 1.08
CDK5RAP3-233ENST00000584186 HECW2Q9P2P5 1572 aa21.77■■□□□ 1.08
CDK5RAP3-233ENST00000584186 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
CDK5RAP3-233ENST00000584186 ATP10AO60312 1499 aa21.76■■□□□ 1.07
CDK5RAP3-233ENST00000584186 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
CDK5RAP3-233ENST00000584186 ABCC1P33527 1531 aa21.75■■□□□ 1.07
CDK5RAP3-233ENST00000584186 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
CDK5RAP3-233ENST00000584186 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
CDK5RAP3-233ENST00000584186 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
CDK5RAP3-233ENST00000584186 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
CDK5RAP3-233ENST00000584186 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
CDK5RAP3-233ENST00000584186 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
CDK5RAP3-233ENST00000584186 KDM5CP41229 1560 aa21.73■■□□□ 1.07
CDK5RAP3-233ENST00000584186 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
CDK5RAP3-233ENST00000584186 RIMS1Q86UR5 1692 aaKnown RBP21.71■■□□□ 1.07
CDK5RAP3-233ENST00000584186 ITSN2Q9NZM3 1697 aa21.7■■□□□ 1.06
CDK5RAP3-233ENST00000584186 HNRNPMP52272 730 aaKnown RBP eCLIP21.68■■□□□ 1.06
CDK5RAP3-233ENST00000584186 SAMD9LQ8IVG5 1584 aa21.68■■□□□ 1.06
CDK5RAP3-233ENST00000584186 EHBP1L1Q8N3D4 1523 aa21.67■■□□□ 1.06
CDK5RAP3-233ENST00000584186 MLH3Q9UHC1 1453 aa21.67■■□□□ 1.06
CDK5RAP3-233ENST00000584186 DIP2CQ9Y2E4 1556 aa21.65■■□□□ 1.06
CDK5RAP3-233ENST00000584186 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
CDK5RAP3-233ENST00000584186 ABCA6Q8N139 1617 aa21.64■■□□□ 1.05
CDK5RAP3-233ENST00000584186 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
CDK5RAP3-233ENST00000584186 FER1L4A9Z1Z3 1794 aa21.62■■□□□ 1.05
CDK5RAP3-233ENST00000584186 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
CDK5RAP3-233ENST00000584186 SPAG9O60271 1321 aaKnown RBP21.61■■□□□ 1.05
CDK5RAP3-233ENST00000584186 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
CDK5RAP3-233ENST00000584186 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
CDK5RAP3-233ENST00000584186 KIDINS220Q9ULH0 1771 aa21.59■■□□□ 1.05
CDK5RAP3-233ENST00000584186 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
CDK5RAP3-233ENST00000584186 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
CDK5RAP3-233ENST00000584186 NCOA2Q15596 1464 aa21.57■■□□□ 1.04
CDK5RAP3-233ENST00000584186 SUPT6HQ7KZ85 1726 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP3-233ENST00000584186 CEBPAP49715 358 aaPredicted RBP21.55■■□□□ 1.04
CDK5RAP3-233ENST00000584186 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
CDK5RAP3-233ENST00000584186 LMTK3Q96Q04 1460 aa21.53■■□□□ 1.04
CDK5RAP3-233ENST00000584186 AGLP35573 1532 aa21.52■■□□□ 1.04
CDK5RAP3-233ENST00000584186 ATP7AQ04656 1500 aa21.52■■□□□ 1.04
CDK5RAP3-233ENST00000584186 LRRC9Q6ZRR7 1453 aa21.52■■□□□ 1.03
CDK5RAP3-233ENST00000584186 HSPA2P54652 639 aa21.51■■□□□ 1.03
CDK5RAP3-233ENST00000584186 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
CDK5RAP3-233ENST00000584186 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP3-233ENST00000584186 MBD5Q9P267 1494 aa21.48■■□□□ 1.03
CDK5RAP3-233ENST00000584186 CAMSAP2Q08AD1 1489 aa21.46■■□□□ 1.03
CDK5RAP3-233ENST00000584186 APLP2Q06481 763 aa21.46■■□□□ 1.03
CDK5RAP3-233ENST00000584186 A2MP01023 1474 aa21.45■■□□□ 1.03
CDK5RAP3-233ENST00000584186 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
CDK5RAP3-233ENST00000584186 CCDC141Q6ZP82 1450 aa21.42■■□□□ 1.02
CDK5RAP3-233ENST00000584186 GGT6Q6P531 493 aa21.41■■□□□ 1.02
CDK5RAP3-233ENST00000584186 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
CDK5RAP3-233ENST00000584186 RSPH4AQ5TD94 716 aa21.4■■□□□ 1.02
CDK5RAP3-233ENST00000584186 PLXNC1O60486 1568 aa21.4■■□□□ 1.02
CDK5RAP3-233ENST00000584186 RTEL1-TNFRSF6BF6WH68 1400 aa21.39■■□□□ 1.02
CDK5RAP3-233ENST00000584186 C3P01024 1663 aa21.39■■□□□ 1.01
CDK5RAP3-233ENST00000584186 ADGBQ8N7X0 1667 aa21.39■■□□□ 1.01
CDK5RAP3-233ENST00000584186 PREX1Q8TCU6 1659 aa21.38■■□□□ 1.01
CDK5RAP3-233ENST00000584186 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
CDK5RAP3-233ENST00000584186 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
CDK5RAP3-233ENST00000584186 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
CDK5RAP3-233ENST00000584186 UHRF1BP1Q6BDS2 1440 aa21.37■■□□□ 1.01
CDK5RAP3-233ENST00000584186 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
CDK5RAP3-233ENST00000584186 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
CDK5RAP3-233ENST00000584186 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
CDK5RAP3-233ENST00000584186 ARHGEF5Q12774 1597 aa21.33■■□□□ 1.01
CDK5RAP3-233ENST00000584186 CLTCQ00610 1675 aaKnown RBP21.32■■□□□ 1
CDK5RAP3-233ENST00000584186 KIF3BO15066 747 aa21.32■■□□□ 1
CDK5RAP3-233ENST00000584186 MIA2Q96PC5 1412 aa21.31■■□□□ 1
CDK5RAP3-233ENST00000584186 MROH2AA6NES4 1674 aa21.3■■□□□ 1
CDK5RAP3-233ENST00000584186 SETD1BQ9UPS6 1966 aaKnown RBP21.3■■□□□ 1
CDK5RAP3-233ENST00000584186 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
CDK5RAP3-233ENST00000584186 NPATQ14207 1427 aa21.26■□□□□ 0.99
CDK5RAP3-233ENST00000584186 WASHC2CQ9Y4E1 1318 aa21.22■□□□□ 0.99
CDK5RAP3-233ENST00000584186 MAST1Q9Y2H9 1570 aa21.22■□□□□ 0.99
CDK5RAP3-233ENST00000584186 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
CDK5RAP3-233ENST00000584186 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
CDK5RAP3-233ENST00000584186 PTPN23Q9H3S7 1636 aa21.21■□□□□ 0.99
CDK5RAP3-233ENST00000584186 STRCQ7RTU9 1775 aa21.19■□□□□ 0.98
CDK5RAP3-233ENST00000584186 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
CDK5RAP3-233ENST00000584186 ABCC5O15440 1437 aa21.17■□□□□ 0.98
CDK5RAP3-233ENST00000584186 KDM5DQ9BY66 1539 aa21.17■□□□□ 0.98
CDK5RAP3-233ENST00000584186 FBXO41Q8TF61 875 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms