RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
TTC39C-208ENST00000584095 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
TTC39C-208ENST00000584095 DSG2Q14126 1118 aa12.13□□□□□ -0.47
TTC39C-208ENST00000584095 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
TTC39C-208ENST00000584095 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
TTC39C-208ENST00000584095 IER5LQ5T953 404 aa12.1□□□□□ -0.47
TTC39C-208ENST00000584095 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
TTC39C-208ENST00000584095 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
TTC39C-208ENST00000584095 FOXK1P85037 733 aa12.08□□□□□ -0.48
TTC39C-208ENST00000584095 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
TTC39C-208ENST00000584095 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
TTC39C-208ENST00000584095 DPYSL4O14531 572 aa12.07□□□□□ -0.48
TTC39C-208ENST00000584095 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
TTC39C-208ENST00000584095 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
TTC39C-208ENST00000584095 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
TTC39C-208ENST00000584095 KIF3CO14782 793 aa12.03□□□□□ -0.48
TTC39C-208ENST00000584095 ZMYND10O75800 440 aa12.03□□□□□ -0.48
TTC39C-208ENST00000584095 PDIA6Q15084 440 aa12.03□□□□□ -0.48
TTC39C-208ENST00000584095 PLCG2P16885 1265 aa12.02□□□□□ -0.49
TTC39C-208ENST00000584095 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
TTC39C-208ENST00000584095 TMEM132AQ24JP5 1023 aa12.02□□□□□ -0.49
TTC39C-208ENST00000584095 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
TTC39C-208ENST00000584095 GABBR2O75899 941 aa12.01□□□□□ -0.49
TTC39C-208ENST00000584095 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
TTC39C-208ENST00000584095 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
TTC39C-208ENST00000584095 G3V3G9 751 aa12□□□□□ -0.49
TTC39C-208ENST00000584095 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
TTC39C-208ENST00000584095 POTEHQ6S545 545 aa11.97□□□□□ -0.49
TTC39C-208ENST00000584095 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
TTC39C-208ENST00000584095 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
TTC39C-208ENST00000584095 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
TTC39C-208ENST00000584095 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
TTC39C-208ENST00000584095 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
TTC39C-208ENST00000584095 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
TTC39C-208ENST00000584095 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
TTC39C-208ENST00000584095 SEC24BO95487 1268 aa11.92□□□□□ -0.5
TTC39C-208ENST00000584095 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
TTC39C-208ENST00000584095 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
TTC39C-208ENST00000584095 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
TTC39C-208ENST00000584095 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
TTC39C-208ENST00000584095 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
TTC39C-208ENST00000584095 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
TTC39C-208ENST00000584095 GPR37O15354 613 aa11.86□□□□□ -0.51
TTC39C-208ENST00000584095 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
TTC39C-208ENST00000584095 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
TTC39C-208ENST00000584095 AK7Q96M32 723 aa11.85□□□□□ -0.51
TTC39C-208ENST00000584095 C7P10643 843 aa11.83□□□□□ -0.52
TTC39C-208ENST00000584095 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
TTC39C-208ENST00000584095 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
TTC39C-208ENST00000584095 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
TTC39C-208ENST00000584095 OSBPP22059 807 aa11.8□□□□□ -0.52
TTC39C-208ENST00000584095 PTGER2P43116 358 aa11.79□□□□□ -0.52
TTC39C-208ENST00000584095 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
TTC39C-208ENST00000584095 DDX12PQ92771 950 aa11.77□□□□□ -0.53
TTC39C-208ENST00000584095 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
TTC39C-208ENST00000584095 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
TTC39C-208ENST00000584095 TRIM66O15016 1216 aa11.76□□□□□ -0.53
TTC39C-208ENST00000584095 EVI5O60447 810 aa11.76□□□□□ -0.53
TTC39C-208ENST00000584095 TBC1D12O60347 775 aa11.75□□□□□ -0.53
TTC39C-208ENST00000584095 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
TTC39C-208ENST00000584095 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
TTC39C-208ENST00000584095 PDE4DQ08499 809 aa11.72□□□□□ -0.53
TTC39C-208ENST00000584095 SLC34A2O95436 690 aa11.7□□□□□ -0.54
TTC39C-208ENST00000584095 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
TTC39C-208ENST00000584095 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
TTC39C-208ENST00000584095 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
TTC39C-208ENST00000584095 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
TTC39C-208ENST00000584095 GNPATO15228 680 aa11.68□□□□□ -0.54
TTC39C-208ENST00000584095 FCHSD2O94868 740 aa11.68□□□□□ -0.54
TTC39C-208ENST00000584095 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
TTC39C-208ENST00000584095 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
TTC39C-208ENST00000584095 FECHP22830 423 aa11.67□□□□□ -0.54
TTC39C-208ENST00000584095 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
TTC39C-208ENST00000584095 HIC1Q14526 733 aa11.66□□□□□ -0.54
TTC39C-208ENST00000584095 IRF6O14896 467 aa11.65□□□□□ -0.54
TTC39C-208ENST00000584095 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
TTC39C-208ENST00000584095 PTGDRQ13258 359 aa11.64□□□□□ -0.55
TTC39C-208ENST00000584095 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
TTC39C-208ENST00000584095 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
TTC39C-208ENST00000584095 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
TTC39C-208ENST00000584095 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
TTC39C-208ENST00000584095 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
TTC39C-208ENST00000584095 PHF14O94880 888 aa11.6□□□□□ -0.55
TTC39C-208ENST00000584095 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
TTC39C-208ENST00000584095 AMHR2Q16671 573 aa11.6□□□□□ -0.55
TTC39C-208ENST00000584095 EPAS1Q99814 870 aa11.59□□□□□ -0.55
TTC39C-208ENST00000584095 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
TTC39C-208ENST00000584095 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
TTC39C-208ENST00000584095 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
TTC39C-208ENST00000584095 FAM117AQ9C073 453 aa11.57□□□□□ -0.56
TTC39C-208ENST00000584095 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
TTC39C-208ENST00000584095 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
TTC39C-208ENST00000584095 MAP3K7O43318 606 aa11.55□□□□□ -0.56
TTC39C-208ENST00000584095 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
TTC39C-208ENST00000584095 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
TTC39C-208ENST00000584095 TSR1Q2NL82 804 aaKnown RBP11.53□□□□□ -0.56
TTC39C-208ENST00000584095 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
TTC39C-208ENST00000584095 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
TTC39C-208ENST00000584095 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
TTC39C-208ENST00000584095 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms