RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SCUBE2Q9NQ36 999 aa9.97□□□□□ -0.81
SKA2-210ENST00000584089 PDE4AP27815 886 aa9.96□□□□□ -0.82
SKA2-210ENST00000584089 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
SKA2-210ENST00000584089 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
SKA2-210ENST00000584089 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
SKA2-210ENST00000584089 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
SKA2-210ENST00000584089 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
SKA2-210ENST00000584089 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
SKA2-210ENST00000584089 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
SKA2-210ENST00000584089 KIF3CO14782 793 aa9.91□□□□□ -0.82
SKA2-210ENST00000584089 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
SKA2-210ENST00000584089 MFSD10Q14728 455 aa9.89□□□□□ -0.83
SKA2-210ENST00000584089 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
SKA2-210ENST00000584089 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
SKA2-210ENST00000584089 SLAIN1Q8ND83 568 aa9.88□□□□□ -0.83
SKA2-210ENST00000584089 WDR70Q9NW82 654 aa9.88□□□□□ -0.83
SKA2-210ENST00000584089 FOXK1P85037 733 aa9.87□□□□□ -0.83
SKA2-210ENST00000584089 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
SKA2-210ENST00000584089 DSG2Q14126 1118 aa9.86□□□□□ -0.83
SKA2-210ENST00000584089 PPP1R15BQ5SWA1 713 aa9.85□□□□□ -0.83
SKA2-210ENST00000584089 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
SKA2-210ENST00000584089 E2F4Q16254 413 aa9.79□□□□□ -0.84
SKA2-210ENST00000584089 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
SKA2-210ENST00000584089 SNPHO15079 494 aa9.76□□□□□ -0.85
SKA2-210ENST00000584089 SLC34A2O95436 690 aa9.75□□□□□ -0.85
SKA2-210ENST00000584089 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
SKA2-210ENST00000584089 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
SKA2-210ENST00000584089 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
SKA2-210ENST00000584089 KCNV2Q8TDN2 545 aa9.72□□□□□ -0.85
SKA2-210ENST00000584089 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.86
SKA2-210ENST00000584089 EMILIN3Q9NT22 766 aa9.71□□□□□ -0.86
SKA2-210ENST00000584089 ARIH1Q9Y4X5 557 aaPredicted RBP9.71□□□□□ -0.86
SKA2-210ENST00000584089 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
SKA2-210ENST00000584089 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
SKA2-210ENST00000584089 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
SKA2-210ENST00000584089 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
SKA2-210ENST00000584089 TBC1D12O60347 775 aa9.68□□□□□ -0.86
SKA2-210ENST00000584089 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SKA2-210ENST00000584089 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
SKA2-210ENST00000584089 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
SKA2-210ENST00000584089 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
SKA2-210ENST00000584089 DPYSL4O14531 572 aa9.65□□□□□ -0.86
SKA2-210ENST00000584089 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
SKA2-210ENST00000584089 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
SKA2-210ENST00000584089 ARSIQ5FYB1 569 aa9.62□□□□□ -0.87
SKA2-210ENST00000584089 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
SKA2-210ENST00000584089 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
SKA2-210ENST00000584089 PDIA6Q15084 440 aa9.6□□□□□ -0.87
SKA2-210ENST00000584089 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
SKA2-210ENST00000584089 ST18O60284 1047 aa9.59□□□□□ -0.87
SKA2-210ENST00000584089 EVI5O60447 810 aa9.59□□□□□ -0.87
SKA2-210ENST00000584089 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
SKA2-210ENST00000584089 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.886e-7■■■■□ 22.3
SKA2-210ENST00000584089 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
SKA2-210ENST00000584089 NUDT7P0C024 238 aa9.57□□□□□ -0.88
SKA2-210ENST00000584089 NBR1Q14596 966 aa9.57□□□□□ -0.88
SKA2-210ENST00000584089 PTGER2P43116 358 aa9.54□□□□□ -0.88
SKA2-210ENST00000584089 SEMA3EO15041 775 aa9.52□□□□□ -0.89
SKA2-210ENST00000584089 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
SKA2-210ENST00000584089 BCANQ96GW7 911 aa9.52□□□□□ -0.89
SKA2-210ENST00000584089 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
SKA2-210ENST00000584089 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
SKA2-210ENST00000584089 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
SKA2-210ENST00000584089 EMP3P54852 163 aa9.49□□□□□ -0.89
SKA2-210ENST00000584089 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
SKA2-210ENST00000584089 JPH4Q96JJ6 628 aa9.48□□□□□ -0.89
SKA2-210ENST00000584089 PHF14O94880 888 aa9.47□□□□□ -0.89
SKA2-210ENST00000584089 MLLT3P42568 568 aaPredicted RBP9.47□□□□□ -0.89
SKA2-210ENST00000584089 FOSBP53539 338 aa9.47□□□□□ -0.89
SKA2-210ENST00000584089 SMYD5Q6GMV2 418 aa9.47□□□□□ -0.89
SKA2-210ENST00000584089 DDX12PQ92771 950 aa9.47□□□□□ -0.89
SKA2-210ENST00000584089 ERBB3P21860 1342 aa9.47□□□□□ -0.89
SKA2-210ENST00000584089 EPAS1Q99814 870 aa9.46□□□□□ -0.9
SKA2-210ENST00000584089 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
SKA2-210ENST00000584089 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
SKA2-210ENST00000584089 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
SKA2-210ENST00000584089 PCDHGA10Q9Y5H3 936 aa9.45□□□□□ -0.9
SKA2-210ENST00000584089 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
SKA2-210ENST00000584089 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
SKA2-210ENST00000584089 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
SKA2-210ENST00000584089 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
SKA2-210ENST00000584089 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
SKA2-210ENST00000584089 OSBPP22059 807 aa9.42□□□□□ -0.9
SKA2-210ENST00000584089 VARS2Q5ST30 1063 aaKnown RBP9.42□□□□□ -0.9
SKA2-210ENST00000584089 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
SKA2-210ENST00000584089 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
SKA2-210ENST00000584089 EN1Q05925 392 aaPredicted RBP9.38□□□□□ -0.91
SKA2-210ENST00000584089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SKA2-210ENST00000584089 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
SKA2-210ENST00000584089 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
SKA2-210ENST00000584089 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
SKA2-210ENST00000584089 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
SKA2-210ENST00000584089 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
SKA2-210ENST00000584089 MAP3K7O43318 606 aa9.36□□□□□ -0.91
SKA2-210ENST00000584089 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
SKA2-210ENST00000584089 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
SKA2-210ENST00000584089 POTEGQ6S5H5 508 aa9.35□□□□□ -0.91
SKA2-210ENST00000584089 POTEMA6NI47 508 aa9.34□□□□□ -0.91
SKA2-210ENST00000584089 PBX2P40425 430 aa9.34□□□□□ -0.91
SKA2-210ENST00000584089 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms