RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
PPP4R1-227ENST00000583988 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-227ENST00000583988 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
PPP4R1-227ENST00000583988 C2orf72A6NCS6 295 aa10.52□□□□□ -0.73
PPP4R1-227ENST00000583988 TMC2Q8TDI7 906 aa10.52□□□□□ -0.73
PPP4R1-227ENST00000583988 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-227ENST00000583988 KIF3CO14782 793 aa10.48□□□□□ -0.73
PPP4R1-227ENST00000583988 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
PPP4R1-227ENST00000583988 EMP3P54852 163 aa10.48□□□□□ -0.73
PPP4R1-227ENST00000583988 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
PPP4R1-227ENST00000583988 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
PPP4R1-227ENST00000583988 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-227ENST00000583988 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-227ENST00000583988 PCDH10Q9P2E7 1040 aa10.42□□□□□ -0.74
PPP4R1-227ENST00000583988 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
PPP4R1-227ENST00000583988 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
PPP4R1-227ENST00000583988 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-227ENST00000583988 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
PPP4R1-227ENST00000583988 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.75
PPP4R1-227ENST00000583988 ERBB3P21860 1342 aa10.37□□□□□ -0.75
PPP4R1-227ENST00000583988 DSG2Q14126 1118 aa10.37□□□□□ -0.75
PPP4R1-227ENST00000583988 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
PPP4R1-227ENST00000583988 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
PPP4R1-227ENST00000583988 FOXK1P85037 733 aa10.36□□□□□ -0.75
PPP4R1-227ENST00000583988 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
PPP4R1-227ENST00000583988 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-227ENST00000583988 POTEB3A0JP26 581 aa10.35□□□□□ -0.75
PPP4R1-227ENST00000583988 POTEBQ6S5H4 581 aa10.35□□□□□ -0.75
PPP4R1-227ENST00000583988 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
PPP4R1-227ENST00000583988 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
PPP4R1-227ENST00000583988 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
PPP4R1-227ENST00000583988 PDE4AP27815 886 aa10.32□□□□□ -0.76
PPP4R1-227ENST00000583988 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-227ENST00000583988 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
PPP4R1-227ENST00000583988 SLC34A2O95436 690 aa10.31□□□□□ -0.76
PPP4R1-227ENST00000583988 NUDT7P0C024 238 aa10.31□□□□□ -0.76
PPP4R1-227ENST00000583988 CFAP44Q96MT7 982 aa10.31□□□□□ -0.76
PPP4R1-227ENST00000583988 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
PPP4R1-227ENST00000583988 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-227ENST00000583988 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
PPP4R1-227ENST00000583988 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-227ENST00000583988 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-227ENST00000583988 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-227ENST00000583988 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-227ENST00000583988 UPF1Q92900 1129 aaKnown RBP eCLIP10.25□□□□□ -0.77
PPP4R1-227ENST00000583988 TBC1D12O60347 775 aa10.24□□□□□ -0.77
PPP4R1-227ENST00000583988 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
PPP4R1-227ENST00000583988 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
PPP4R1-227ENST00000583988 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
PPP4R1-227ENST00000583988 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
PPP4R1-227ENST00000583988 MFSD10Q14728 455 aa10.2□□□□□ -0.78
PPP4R1-227ENST00000583988 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
PPP4R1-227ENST00000583988 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
PPP4R1-227ENST00000583988 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
PPP4R1-227ENST00000583988 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
PPP4R1-227ENST00000583988 MAP3K9P80192 1104 aa10.13□□□□□ -0.79
PPP4R1-227ENST00000583988 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
PPP4R1-227ENST00000583988 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
PPP4R1-227ENST00000583988 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
PPP4R1-227ENST00000583988 EVI5O60447 810 aa10.1□□□□□ -0.79
PPP4R1-227ENST00000583988 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
PPP4R1-227ENST00000583988 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
PPP4R1-227ENST00000583988 PPP4R3BQ5MIZ7 849 aa10.09□□□□□ -0.79
PPP4R1-227ENST00000583988 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
PPP4R1-227ENST00000583988 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
PPP4R1-227ENST00000583988 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
PPP4R1-227ENST00000583988 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
PPP4R1-227ENST00000583988 PBX2P40425 430 aa10.06□□□□□ -0.8
PPP4R1-227ENST00000583988 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
PPP4R1-227ENST00000583988 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
PPP4R1-227ENST00000583988 DPYSL4O14531 572 aa10.05□□□□□ -0.8
PPP4R1-227ENST00000583988 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
PPP4R1-227ENST00000583988 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
PPP4R1-227ENST00000583988 ANO8Q9HCE9 1232 aaPredicted RBP10.03□□□□□ -0.8
PPP4R1-227ENST00000583988 PSEN2P49810 448 aa10.02□□□□□ -0.81
PPP4R1-227ENST00000583988 FOSBP53539 338 aa10.01□□□□□ -0.81
PPP4R1-227ENST00000583988 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-227ENST00000583988 E2F4Q16254 413 aa10.01□□□□□ -0.81
PPP4R1-227ENST00000583988 KCNK17Q96T54 332 aa10.01□□□□□ -0.81
PPP4R1-227ENST00000583988 JPH4Q96JJ6 628 aa10□□□□□ -0.81
PPP4R1-227ENST00000583988 KCNH8Q96L42 1107 aa10□□□□□ -0.81
PPP4R1-227ENST00000583988 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
PPP4R1-227ENST00000583988 ZDHHC16Q969W1 377 aa9.97□□□□□ -0.81
PPP4R1-227ENST00000583988 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
PPP4R1-227ENST00000583988 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
PPP4R1-227ENST00000583988 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
PPP4R1-227ENST00000583988 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
PPP4R1-227ENST00000583988 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
PPP4R1-227ENST00000583988 PTPREP23469 700 aa9.94□□□□□ -0.82
PPP4R1-227ENST00000583988 DDX12PQ92771 950 aa9.94□□□□□ -0.82
PPP4R1-227ENST00000583988 PTGER2P43116 358 aa9.93□□□□□ -0.82
PPP4R1-227ENST00000583988 VSIG10Q8N0Z9 540 aa9.93□□□□□ -0.82
PPP4R1-227ENST00000583988 RNF166Q96A37 237 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-227ENST00000583988 PHF14O94880 888 aa9.92□□□□□ -0.82
PPP4R1-227ENST00000583988 PDIA6Q15084 440 aa9.91□□□□□ -0.82
PPP4R1-227ENST00000583988 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
PPP4R1-227ENST00000583988 TK2O00142 265 aa9.9□□□□□ -0.82
PPP4R1-227ENST00000583988 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
PPP4R1-227ENST00000583988 FBXW7Q969H0 707 aa9.89□□□□□ -0.83
PPP4R1-227ENST00000583988 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms