RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ABCC10Q5T3U5 1492 aa14.04□□□□□ -0.16
CASC3-209ENST00000583902 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
CASC3-209ENST00000583902 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
CASC3-209ENST00000583902 PHLDB1Q86UU1 1377 aa14.01□□□□□ -0.17
CASC3-209ENST00000583902 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
CASC3-209ENST00000583902 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
CASC3-209ENST00000583902 PPARGC1BQ86YN6 1023 aaKnown RBP14□□□□□ -0.17
CASC3-209ENST00000583902 GLI2P10070 1586 aa14□□□□□ -0.17
CASC3-209ENST00000583902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.17
CASC3-209ENST00000583902 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
CASC3-209ENST00000583902 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
CASC3-209ENST00000583902 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
CASC3-209ENST00000583902 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
CASC3-209ENST00000583902 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
CASC3-209ENST00000583902 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
CASC3-209ENST00000583902 PLEKHH2Q8IVE3 1493 aa13.98□□□□□ -0.17
CASC3-209ENST00000583902 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
CASC3-209ENST00000583902 PLCH2O75038 1416 aa13.97□□□□□ -0.17
CASC3-209ENST00000583902 PTPN23Q9H3S7 1636 aa13.97□□□□□ -0.17
CASC3-209ENST00000583902 CFAP74Q9C0B2 1584 aa13.95□□□□□ -0.18
CASC3-209ENST00000583902 EFCAB2Q5VUJ9 269 aa13.94□□□□□ -0.18
CASC3-209ENST00000583902 TTC37Q6PGP7 1564 aa13.94□□□□□ -0.18
CASC3-209ENST00000583902 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
CASC3-209ENST00000583902 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
CASC3-209ENST00000583902 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
CASC3-209ENST00000583902 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
CASC3-209ENST00000583902 CD109Q6YHK3 1445 aa13.9□□□□□ -0.18
CASC3-209ENST00000583902 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
CASC3-209ENST00000583902 MAP3K4Q9Y6R4 1608 aa13.9□□□□□ -0.19
CASC3-209ENST00000583902 ARHGEF5Q12774 1597 aa13.89□□□□□ -0.19
CASC3-209ENST00000583902 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
CASC3-209ENST00000583902 FAM50AQ14320 339 aaKnown RBP13.89□□□□□ -0.19
CASC3-209ENST00000583902 CAMSAP2Q08AD1 1489 aa13.88□□□□□ -0.19
CASC3-209ENST00000583902 NEO1Q92859 1461 aa13.88□□□□□ -0.19
CASC3-209ENST00000583902 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
CASC3-209ENST00000583902 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
CASC3-209ENST00000583902 DNMT1P26358 1616 aaKnown RBP13.88□□□□□ -0.19
CASC3-209ENST00000583902 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
CASC3-209ENST00000583902 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
CASC3-209ENST00000583902 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
CASC3-209ENST00000583902 FANCAO15360 1455 aa13.86□□□□□ -0.19
CASC3-209ENST00000583902 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
CASC3-209ENST00000583902 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
CASC3-209ENST00000583902 HRCP23327 699 aa13.84□□□□□ -0.19
CASC3-209ENST00000583902 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
CASC3-209ENST00000583902 DAPK1P53355 1430 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 ABCC1P33527 1531 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
CASC3-209ENST00000583902 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
CASC3-209ENST00000583902 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
CASC3-209ENST00000583902 ZNF777Q9ULD5 760 aaPredicted RBP13.81□□□□□ -0.2
CASC3-209ENST00000583902 ABCC5O15440 1437 aa13.81□□□□□ -0.2
CASC3-209ENST00000583902 MAST1Q9Y2H9 1570 aa13.8□□□□□ -0.2
CASC3-209ENST00000583902 ADGBQ8N7X0 1667 aa13.8□□□□□ -0.2
CASC3-209ENST00000583902 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
CASC3-209ENST00000583902 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
CASC3-209ENST00000583902 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
CASC3-209ENST00000583902 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
CASC3-209ENST00000583902 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
CASC3-209ENST00000583902 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
CASC3-209ENST00000583902 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
CASC3-209ENST00000583902 ZNF644Q9H582 1327 aaPredicted RBP13.77□□□□□ -0.21
CASC3-209ENST00000583902 KCNA4P22459 653 aa13.76□□□□□ -0.21
CASC3-209ENST00000583902 GCC2Q8IWJ2 1684 aa13.75□□□□□ -0.21
CASC3-209ENST00000583902 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
CASC3-209ENST00000583902 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
CASC3-209ENST00000583902 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
CASC3-209ENST00000583902 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
CASC3-209ENST00000583902 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
CASC3-209ENST00000583902 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
CASC3-209ENST00000583902 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
CASC3-209ENST00000583902 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
CASC3-209ENST00000583902 KDM5CP41229 1560 aa13.73□□□□□ -0.21
CASC3-209ENST00000583902 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
CASC3-209ENST00000583902 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
CASC3-209ENST00000583902 ITGAEP38570 1179 aa13.72□□□□□ -0.21
CASC3-209ENST00000583902 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
CASC3-209ENST00000583902 MAGI2Q86UL8 1455 aa13.72□□□□□ -0.21
CASC3-209ENST00000583902 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
CASC3-209ENST00000583902 TSPOAP1O95153 1857 aa13.71□□□□□ -0.21
CASC3-209ENST00000583902 NAIPQ13075 1403 aa13.71□□□□□ -0.22
CASC3-209ENST00000583902 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
CASC3-209ENST00000583902 TRAPPC8Q9Y2L5 1435 aa13.69□□□□□ -0.22
CASC3-209ENST00000583902 INO80Q9ULG1 1556 aaPredicted RBP13.69□□□□□ -0.22
CASC3-209ENST00000583902 ZMYM4Q5VZL5 1548 aa13.69□□□□□ -0.22
CASC3-209ENST00000583902 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
CASC3-209ENST00000583902 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
CASC3-209ENST00000583902 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
CASC3-209ENST00000583902 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
CASC3-209ENST00000583902 ERBINQ96RT1 1412 aa13.67□□□□□ -0.22
CASC3-209ENST00000583902 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
CASC3-209ENST00000583902 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
CASC3-209ENST00000583902 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
CASC3-209ENST00000583902 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
CASC3-209ENST00000583902 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.22
CASC3-209ENST00000583902 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
CASC3-209ENST00000583902 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms