RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ARAP3Q8WWN8 1544 aa22.17■■□□□ 1.14
SENP3-208ENST00000583277 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
SENP3-208ENST00000583277 ARHGAP5Q13017 1502 aa22.13■■□□□ 1.13
SENP3-208ENST00000583277 PLCH2O75038 1416 aa22.12■■□□□ 1.13
SENP3-208ENST00000583277 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
SENP3-208ENST00000583277 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.13
SENP3-208ENST00000583277 GLI2P10070 1586 aa22.07■■□□□ 1.12
SENP3-208ENST00000583277 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
SENP3-208ENST00000583277 ITGAEP38570 1179 aa22.05■■□□□ 1.12
SENP3-208ENST00000583277 CROCC2H7BZ55 1655 aa22.05■■□□□ 1.12
SENP3-208ENST00000583277 ARHGEF5Q12774 1597 aa22.05■■□□□ 1.12
SENP3-208ENST00000583277 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
SENP3-208ENST00000583277 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
SENP3-208ENST00000583277 DIP2BQ9P265 1576 aa22.04■■□□□ 1.12
SENP3-208ENST00000583277 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
SENP3-208ENST00000583277 DAPK1P53355 1430 aa22.03■■□□□ 1.12
SENP3-208ENST00000583277 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.12
SENP3-208ENST00000583277 EFCAB2Q5VUJ9 269 aa22.02■■□□□ 1.12
SENP3-208ENST00000583277 KIAA1107Q9UPP5 1409 aa22.01■■□□□ 1.11
SENP3-208ENST00000583277 CD109Q6YHK3 1445 aa22■■□□□ 1.11
SENP3-208ENST00000583277 ABCC1P33527 1531 aa22■■□□□ 1.11
SENP3-208ENST00000583277 FANCAO15360 1455 aa22■■□□□ 1.11
SENP3-208ENST00000583277 ABCC5O15440 1437 aa22■■□□□ 1.11
SENP3-208ENST00000583277 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
SENP3-208ENST00000583277 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
SENP3-208ENST00000583277 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
SENP3-208ENST00000583277 ADGBQ8N7X0 1667 aa21.99■■□□□ 1.11
SENP3-208ENST00000583277 AKNAQ7Z591 1439 aa21.98■■□□□ 1.11
SENP3-208ENST00000583277 CCDC141Q6ZP82 1450 aa21.97■■□□□ 1.11
SENP3-208ENST00000583277 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
SENP3-208ENST00000583277 RSPH4AQ5TD94 716 aa21.95■■□□□ 1.11
SENP3-208ENST00000583277 GCC2Q8IWJ2 1684 aa21.94■■□□□ 1.1
SENP3-208ENST00000583277 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
SENP3-208ENST00000583277 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
SENP3-208ENST00000583277 KIF13AQ9H1H9 1805 aa21.93■■□□□ 1.1
SENP3-208ENST00000583277 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
SENP3-208ENST00000583277 ADGRL2O95490 1459 aa21.92■■□□□ 1.1
SENP3-208ENST00000583277 NEO1Q92859 1461 aa21.91■■□□□ 1.1
SENP3-208ENST00000583277 MAST1Q9Y2H9 1570 aa21.91■■□□□ 1.1
SENP3-208ENST00000583277 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
SENP3-208ENST00000583277 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
SENP3-208ENST00000583277 C9orf84Q5VXU9 1444 aa21.9■■□□□ 1.1
SENP3-208ENST00000583277 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
SENP3-208ENST00000583277 HNRNPMP52272 730 aaKnown RBP eCLIP21.89■■□□□ 1.09
SENP3-208ENST00000583277 NAIPQ13075 1403 aa21.87■■□□□ 1.09
SENP3-208ENST00000583277 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
SENP3-208ENST00000583277 TSPY10P0CW01 314 aa21.87■■□□□ 1.09
SENP3-208ENST00000583277 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
SENP3-208ENST00000583277 RAB3GAP2Q9H2M9 1393 aa21.86■■□□□ 1.09
SENP3-208ENST00000583277 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
SENP3-208ENST00000583277 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
SENP3-208ENST00000583277 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
SENP3-208ENST00000583277 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
SENP3-208ENST00000583277 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
SENP3-208ENST00000583277 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.09
SENP3-208ENST00000583277 PLXNC1O60486 1568 aa21.83■■□□□ 1.09
SENP3-208ENST00000583277 HRCP23327 699 aa21.82■■□□□ 1.08
SENP3-208ENST00000583277 TRAPPC8Q9Y2L5 1435 aa21.82■■□□□ 1.08
SENP3-208ENST00000583277 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
SENP3-208ENST00000583277 RRP7BPQ9NSQ0 103 aa21.8■■□□□ 1.08
SENP3-208ENST00000583277 POGZQ7Z3K3 1410 aa21.79■■□□□ 1.08
SENP3-208ENST00000583277 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
SENP3-208ENST00000583277 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
SENP3-208ENST00000583277 ZFYVE16Q7Z3T8 1539 aa21.78■■□□□ 1.08
SENP3-208ENST00000583277 KDM5CP41229 1560 aa21.77■■□□□ 1.08
SENP3-208ENST00000583277 ACIN1Q9UKV3 1341 aaKnown RBP21.76■■□□□ 1.07
SENP3-208ENST00000583277 DENND4BO75064 1496 aaPredicted RBP21.76■■□□□ 1.07
SENP3-208ENST00000583277 KIF15Q9NS87 1388 aa21.75■■□□□ 1.07
SENP3-208ENST00000583277 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
SENP3-208ENST00000583277 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
SENP3-208ENST00000583277 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
SENP3-208ENST00000583277 KDM6BO15054 1643 aa21.72■■□□□ 1.07
SENP3-208ENST00000583277 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
SENP3-208ENST00000583277 ANKRD50Q9ULJ7 1429 aa21.71■■□□□ 1.07
SENP3-208ENST00000583277 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
SENP3-208ENST00000583277 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
SENP3-208ENST00000583277 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
SENP3-208ENST00000583277 KIDINS220Q9ULH0 1771 aa21.69■■□□□ 1.06
SENP3-208ENST00000583277 MLH3Q9UHC1 1453 aa21.69■■□□□ 1.06
SENP3-208ENST00000583277 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
SENP3-208ENST00000583277 FRMPD1Q5SYB0 1578 aa21.67■■□□□ 1.06
SENP3-208ENST00000583277 ERBINQ96RT1 1412 aa21.66■■□□□ 1.06
SENP3-208ENST00000583277 ZMYM4Q5VZL5 1548 aa21.66■■□□□ 1.06
SENP3-208ENST00000583277 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
SENP3-208ENST00000583277 EIF2AK4Q9P2K8 1649 aaKnown RBP21.61■■□□□ 1.05
SENP3-208ENST00000583277 UNC13BO14795 1591 aa21.6■■□□□ 1.05
SENP3-208ENST00000583277 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
SENP3-208ENST00000583277 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
SENP3-208ENST00000583277 ABCA6Q8N139 1617 aa21.6■■□□□ 1.05
SENP3-208ENST00000583277 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
SENP3-208ENST00000583277 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
SENP3-208ENST00000583277 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.05
SENP3-208ENST00000583277 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
SENP3-208ENST00000583277 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
SENP3-208ENST00000583277 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
SENP3-208ENST00000583277 A2MP01023 1474 aa21.55■■□□□ 1.04
SENP3-208ENST00000583277 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
SENP3-208ENST00000583277 DEPDC5O75140 1603 aa21.54■■□□□ 1.04
SENP3-208ENST00000583277 BCORL1Q5H9F3 1711 aa21.53■■□□□ 1.04
SENP3-208ENST00000583277 PZPP20742 1482 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms