RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 CDC42BPBQ9Y5S2 1711 aa19.04■□□□□ 0.64
CDH8-208ENST00000582980 CFAP74Q9C0B2 1584 aa19.03■□□□□ 0.64
CDH8-208ENST00000582980 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
CDH8-208ENST00000582980 FGD6Q6ZV73 1430 aa19.01■□□□□ 0.63
CDH8-208ENST00000582980 FANCAO15360 1455 aa19■□□□□ 0.63
CDH8-208ENST00000582980 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
CDH8-208ENST00000582980 TSPOAP1O95153 1857 aa19■□□□□ 0.63
CDH8-208ENST00000582980 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
CDH8-208ENST00000582980 PTPN23Q9H3S7 1636 aa18.98■□□□□ 0.63
CDH8-208ENST00000582980 PPRC1Q5VV67 1664 aaKnown RBP18.97■□□□□ 0.63
CDH8-208ENST00000582980 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
CDH8-208ENST00000582980 NEO1Q92859 1461 aa18.97■□□□□ 0.63
CDH8-208ENST00000582980 SAMD9LQ8IVG5 1584 aa18.95■□□□□ 0.62
CDH8-208ENST00000582980 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
CDH8-208ENST00000582980 CAMSAP2Q08AD1 1489 aa18.95■□□□□ 0.62
CDH8-208ENST00000582980 TCOF1Q13428 1488 aaKnown RBP18.95■□□□□ 0.62
CDH8-208ENST00000582980 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
CDH8-208ENST00000582980 ABCC1P33527 1531 aa18.92■□□□□ 0.62
CDH8-208ENST00000582980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDH8-208ENST00000582980 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
CDH8-208ENST00000582980 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
CDH8-208ENST00000582980 ADGRL1O94910 1474 aa18.9■□□□□ 0.62
CDH8-208ENST00000582980 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
CDH8-208ENST00000582980 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
CDH8-208ENST00000582980 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
CDH8-208ENST00000582980 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
CDH8-208ENST00000582980 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
CDH8-208ENST00000582980 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
CDH8-208ENST00000582980 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
CDH8-208ENST00000582980 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
CDH8-208ENST00000582980 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
CDH8-208ENST00000582980 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
CDH8-208ENST00000582980 DENND4BO75064 1496 aaPredicted RBP18.83■□□□□ 0.6
CDH8-208ENST00000582980 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
CDH8-208ENST00000582980 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
CDH8-208ENST00000582980 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
CDH8-208ENST00000582980 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
CDH8-208ENST00000582980 DAPK1P53355 1430 aa18.81■□□□□ 0.6
CDH8-208ENST00000582980 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
CDH8-208ENST00000582980 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
CDH8-208ENST00000582980 RICTORQ6R327 1708 aa18.79■□□□□ 0.6
CDH8-208ENST00000582980 SHANK2Q9UPX8 1470 aa18.78■□□□□ 0.6
CDH8-208ENST00000582980 ABCC5O15440 1437 aa18.78■□□□□ 0.6
CDH8-208ENST00000582980 KDM6BO15054 1643 aa18.78■□□□□ 0.6
CDH8-208ENST00000582980 TSPY4P0CV99 314 aa18.77■□□□□ 0.6
CDH8-208ENST00000582980 TSPY10P0CW01 314 aa18.77■□□□□ 0.6
CDH8-208ENST00000582980 KDM5CP41229 1560 aa18.76■□□□□ 0.59
CDH8-208ENST00000582980 ITGAEP38570 1179 aa18.76■□□□□ 0.59
CDH8-208ENST00000582980 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
CDH8-208ENST00000582980 FRMPD1Q5SYB0 1578 aa18.75■□□□□ 0.59
CDH8-208ENST00000582980 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
CDH8-208ENST00000582980 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
CDH8-208ENST00000582980 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
CDH8-208ENST00000582980 HECW2Q9P2P5 1572 aa18.73■□□□□ 0.59
CDH8-208ENST00000582980 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
CDH8-208ENST00000582980 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
CDH8-208ENST00000582980 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
CDH8-208ENST00000582980 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
CDH8-208ENST00000582980 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
CDH8-208ENST00000582980 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.59
CDH8-208ENST00000582980 ATP7AQ04656 1500 aa18.71■□□□□ 0.59
CDH8-208ENST00000582980 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
CDH8-208ENST00000582980 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
CDH8-208ENST00000582980 PTPRKQ15262 1439 aa18.7■□□□□ 0.58
CDH8-208ENST00000582980 ADGRL2O95490 1459 aa18.7■□□□□ 0.58
CDH8-208ENST00000582980 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
CDH8-208ENST00000582980 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
CDH8-208ENST00000582980 ROCK1Q13464 1354 aa18.68■□□□□ 0.58
CDH8-208ENST00000582980 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
CDH8-208ENST00000582980 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
CDH8-208ENST00000582980 KIDINS220Q9ULH0 1771 aa18.68■□□□□ 0.58
CDH8-208ENST00000582980 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
CDH8-208ENST00000582980 NCOA1Q15788 1441 aa18.65■□□□□ 0.58
CDH8-208ENST00000582980 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
CDH8-208ENST00000582980 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
CDH8-208ENST00000582980 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
CDH8-208ENST00000582980 ABCA6Q8N139 1617 aa18.62■□□□□ 0.57
CDH8-208ENST00000582980 GCC2Q8IWJ2 1684 aa18.62■□□□□ 0.57
CDH8-208ENST00000582980 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
CDH8-208ENST00000582980 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
CDH8-208ENST00000582980 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
CDH8-208ENST00000582980 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
CDH8-208ENST00000582980 YEATS2Q9ULM3 1422 aa18.59■□□□□ 0.57
CDH8-208ENST00000582980 A2MP01023 1474 aa18.58■□□□□ 0.56
CDH8-208ENST00000582980 NAIPQ13075 1403 aa18.57■□□□□ 0.56
CDH8-208ENST00000582980 ATP10AO60312 1499 aa18.57■□□□□ 0.56
CDH8-208ENST00000582980 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
CDH8-208ENST00000582980 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
CDH8-208ENST00000582980 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
CDH8-208ENST00000582980 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
CDH8-208ENST00000582980 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
CDH8-208ENST00000582980 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
CDH8-208ENST00000582980 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
CDH8-208ENST00000582980 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
CDH8-208ENST00000582980 AGLP35573 1532 aa18.49■□□□□ 0.55
CDH8-208ENST00000582980 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
CDH8-208ENST00000582980 HRCP23327 699 aa18.45■□□□□ 0.54
CDH8-208ENST00000582980 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
CDH8-208ENST00000582980 UNC13BO14795 1591 aa18.44■□□□□ 0.54
CDH8-208ENST00000582980 KIF3BO15066 747 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms