RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
CACNB1-211ENST00000582877 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
CACNB1-211ENST00000582877 CDC42BPAQ5VT25 1732 aa16.15■□□□□ 0.18
CACNB1-211ENST00000582877 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.18
CACNB1-211ENST00000582877 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
CACNB1-211ENST00000582877 POGZQ7Z3K3 1410 aa16.14■□□□□ 0.17
CACNB1-211ENST00000582877 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.17
CACNB1-211ENST00000582877 SCAPERQ9BY12 1400 aa16.13■□□□□ 0.17
CACNB1-211ENST00000582877 MADDQ8WXG6 1647 aa16.11■□□□□ 0.17
CACNB1-211ENST00000582877 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
CACNB1-211ENST00000582877 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
CACNB1-211ENST00000582877 ABCC1P33527 1531 aa16.09■□□□□ 0.17
CACNB1-211ENST00000582877 KDM5CP41229 1560 aa16.09■□□□□ 0.17
CACNB1-211ENST00000582877 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
CACNB1-211ENST00000582877 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.16
CACNB1-211ENST00000582877 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
CACNB1-211ENST00000582877 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
CACNB1-211ENST00000582877 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
CACNB1-211ENST00000582877 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
CACNB1-211ENST00000582877 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
CACNB1-211ENST00000582877 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
CACNB1-211ENST00000582877 ABCA6Q8N139 1617 aa16.04■□□□□ 0.16
CACNB1-211ENST00000582877 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
CACNB1-211ENST00000582877 PTPRMP28827 1452 aa16.03■□□□□ 0.16
CACNB1-211ENST00000582877 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
CACNB1-211ENST00000582877 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
CACNB1-211ENST00000582877 TIAM1Q13009 1591 aa16.01■□□□□ 0.15
CACNB1-211ENST00000582877 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
CACNB1-211ENST00000582877 GPATCH8Q9UKJ3 1502 aaKnown RBP16.01■□□□□ 0.15
CACNB1-211ENST00000582877 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
CACNB1-211ENST00000582877 C9orf84Q5VXU9 1444 aa16.01■□□□□ 0.15
CACNB1-211ENST00000582877 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
CACNB1-211ENST00000582877 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
CACNB1-211ENST00000582877 ATP10AO60312 1499 aa15.99■□□□□ 0.15
CACNB1-211ENST00000582877 KIDINS220Q9ULH0 1771 aa15.98■□□□□ 0.15
CACNB1-211ENST00000582877 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
CACNB1-211ENST00000582877 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
CACNB1-211ENST00000582877 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
CACNB1-211ENST00000582877 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
CACNB1-211ENST00000582877 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.14
CACNB1-211ENST00000582877 REREQ9P2R6 1566 aa15.96■□□□□ 0.14
CACNB1-211ENST00000582877 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
CACNB1-211ENST00000582877 INO80Q9ULG1 1556 aaPredicted RBP15.93■□□□□ 0.14
CACNB1-211ENST00000582877 MLECQ14165 292 aa15.93■□□□□ 0.14
CACNB1-211ENST00000582877 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
CACNB1-211ENST00000582877 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
CACNB1-211ENST00000582877 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
CACNB1-211ENST00000582877 ATP7AQ04656 1500 aa15.9■□□□□ 0.14
CACNB1-211ENST00000582877 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
CACNB1-211ENST00000582877 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
CACNB1-211ENST00000582877 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
CACNB1-211ENST00000582877 AGLP35573 1532 aa15.88■□□□□ 0.13
CACNB1-211ENST00000582877 LMTK3Q96Q04 1460 aa15.87■□□□□ 0.13
CACNB1-211ENST00000582877 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
CACNB1-211ENST00000582877 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
CACNB1-211ENST00000582877 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
CACNB1-211ENST00000582877 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
CACNB1-211ENST00000582877 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
CACNB1-211ENST00000582877 C3P01024 1663 aa15.84■□□□□ 0.13
CACNB1-211ENST00000582877 ADGBQ8N7X0 1667 aa15.84■□□□□ 0.13
CACNB1-211ENST00000582877 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
CACNB1-211ENST00000582877 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
CACNB1-211ENST00000582877 MAP3K1Q13233 1512 aa15.84■□□□□ 0.13
CACNB1-211ENST00000582877 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.13
CACNB1-211ENST00000582877 A2MP01023 1474 aa15.79■□□□□ 0.12
CACNB1-211ENST00000582877 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
CACNB1-211ENST00000582877 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
CACNB1-211ENST00000582877 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
CACNB1-211ENST00000582877 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
CACNB1-211ENST00000582877 ARHGEF5Q12774 1597 aa15.78■□□□□ 0.12
CACNB1-211ENST00000582877 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
CACNB1-211ENST00000582877 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
CACNB1-211ENST00000582877 HSPA2P54652 639 aa15.74■□□□□ 0.11
CACNB1-211ENST00000582877 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
CACNB1-211ENST00000582877 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
CACNB1-211ENST00000582877 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
CACNB1-211ENST00000582877 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
CACNB1-211ENST00000582877 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
CACNB1-211ENST00000582877 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
CACNB1-211ENST00000582877 UHRF1BP1Q6BDS2 1440 aa15.7■□□□□ 0.1
CACNB1-211ENST00000582877 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
CACNB1-211ENST00000582877 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
CACNB1-211ENST00000582877 MYO3AQ8NEV4 1616 aa15.68■□□□□ 0.1
CACNB1-211ENST00000582877 STRCQ7RTU9 1775 aa15.67■□□□□ 0.1
CACNB1-211ENST00000582877 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
CACNB1-211ENST00000582877 APLP2Q06481 763 aa15.67■□□□□ 0.1
CACNB1-211ENST00000582877 GGT6Q6P531 493 aa15.66■□□□□ 0.1
CACNB1-211ENST00000582877 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
CACNB1-211ENST00000582877 KDM5DQ9BY66 1539 aa15.64■□□□□ 0.09
CACNB1-211ENST00000582877 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
CACNB1-211ENST00000582877 DNMT1P26358 1616 aaKnown RBP15.64■□□□□ 0.09
CACNB1-211ENST00000582877 RNF17Q9BXT8 1623 aaKnown RBP15.64■□□□□ 0.09
CACNB1-211ENST00000582877 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.09
CACNB1-211ENST00000582877 ZMYM3Q14202 1370 aa15.63■□□□□ 0.09
CACNB1-211ENST00000582877 NPATQ14207 1427 aa15.63■□□□□ 0.09
CACNB1-211ENST00000582877 FGD6Q6ZV73 1430 aa15.62■□□□□ 0.09
CACNB1-211ENST00000582877 FAM135AQ9P2D6 1515 aa15.62■□□□□ 0.09
CACNB1-211ENST00000582877 PTPRKQ15262 1439 aa15.61■□□□□ 0.09
CACNB1-211ENST00000582877 TCOF1Q13428 1488 aaKnown RBP15.61■□□□□ 0.09
CACNB1-211ENST00000582877 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms