RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 ADAMTSL3P82987 1691 aa34.45■■■■□ 3.11
CSNK1D-221ENST00000582844 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
CSNK1D-221ENST00000582844 BCORL1Q5H9F3 1711 aa34.41■■■■□ 3.1
CSNK1D-221ENST00000582844 ARHGAP5Q13017 1502 aa34.41■■■■□ 3.1
CSNK1D-221ENST00000582844 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
CSNK1D-221ENST00000582844 ZFYVE16Q7Z3T8 1539 aa34.4■■■■□ 3.1
CSNK1D-221ENST00000582844 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
CSNK1D-221ENST00000582844 CDC42BPBQ9Y5S2 1711 aa34.38■■■■□ 3.09
CSNK1D-221ENST00000582844 HECW2Q9P2P5 1572 aa34.36■■■■□ 3.09
CSNK1D-221ENST00000582844 PTPRMP28827 1452 aa34.33■■■■□ 3.09
CSNK1D-221ENST00000582844 MADDQ8WXG6 1647 aa34.32■■■■□ 3.08
CSNK1D-221ENST00000582844 SIGLEC1Q9BZZ2 1709 aa34.32■■■■□ 3.08
CSNK1D-221ENST00000582844 PREX2Q70Z35 1606 aa34.3■■■■□ 3.08
CSNK1D-221ENST00000582844 AFAP1Q8N556 730 aa34.29■■■■□ 3.08
CSNK1D-221ENST00000582844 CEP162Q5TB80 1403 aa34.27■■■■□ 3.08
CSNK1D-221ENST00000582844 CDC42BPAQ5VT25 1732 aa34.27■■■■□ 3.08
CSNK1D-221ENST00000582844 ZNF518AQ6AHZ1 1483 aa34.27■■■■□ 3.08
CSNK1D-221ENST00000582844 ATP10AO60312 1499 aa34.23■■■■□ 3.07
CSNK1D-221ENST00000582844 RIMS1Q86UR5 1692 aaKnown RBP34.22■■■■□ 3.07
CSNK1D-221ENST00000582844 KDM5CP41229 1560 aa34.21■■■■□ 3.07
CSNK1D-221ENST00000582844 LOC105371045A0A1W2PR82 267 aa34.19■■■■□ 3.06
CSNK1D-221ENST00000582844 MLECQ14165 292 aa34.19■■■■□ 3.06
CSNK1D-221ENST00000582844 ARHGEF12Q9NZN5 1544 aa34.19■■■■□ 3.06
CSNK1D-221ENST00000582844 MYT1LQ9UL68 1186 aa34.18■■■■□ 3.06
CSNK1D-221ENST00000582844 ABCC1P33527 1531 aa34.18■■■■□ 3.06
CSNK1D-221ENST00000582844 C9orf84Q5VXU9 1444 aa34.16■■■■□ 3.06
CSNK1D-221ENST00000582844 TRAPPC8Q9Y2L5 1435 aa34.16■■■■□ 3.06
CSNK1D-221ENST00000582844 ZNF777Q9ULD5 760 aaPredicted RBP34.15■■■■□ 3.06
CSNK1D-221ENST00000582844 ITSN2Q9NZM3 1697 aa34.15■■■■□ 3.06
CSNK1D-221ENST00000582844 GPATCH8Q9UKJ3 1502 aaKnown RBP34.14■■■■□ 3.06
CSNK1D-221ENST00000582844 MTUS2Q5JR59 1369 aa34.13■■■■□ 3.05
CSNK1D-221ENST00000582844 MLH3Q9UHC1 1453 aa34.1■■■■□ 3.05
CSNK1D-221ENST00000582844 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
CSNK1D-221ENST00000582844 SAMD9LQ8IVG5 1584 aa34.08■■■■□ 3.05
CSNK1D-221ENST00000582844 DIP2CQ9Y2E4 1556 aa34.08■■■■□ 3.05
CSNK1D-221ENST00000582844 FER1L4A9Z1Z3 1794 aa34.08■■■■□ 3.05
CSNK1D-221ENST00000582844 CCNB3Q8WWL7 1395 aa34.06■■■■□ 3.04
CSNK1D-221ENST00000582844 ABCA6Q8N139 1617 aa34.05■■■■□ 3.04
CSNK1D-221ENST00000582844 CFDP1Q9UEE9 299 aaPredicted RBP34.05■■■■□ 3.04
CSNK1D-221ENST00000582844 HNRNPMP52272 730 aaKnown RBP eCLIP34.03■■■■□ 3.042e-7■■■■■ 32.1
CSNK1D-221ENST00000582844 KIDINS220Q9ULH0 1771 aa34.01■■■■□ 3.04
CSNK1D-221ENST00000582844 EHBP1L1Q8N3D4 1523 aa34■■■■□ 3.03
CSNK1D-221ENST00000582844 SYCP2Q9BX26 1530 aa34■■■■□ 3.03
CSNK1D-221ENST00000582844 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
CSNK1D-221ENST00000582844 LMTK3Q96Q04 1460 aa33.95■■■■□ 3.03
CSNK1D-221ENST00000582844 TIAM1Q13009 1591 aa33.95■■■■□ 3.03
CSNK1D-221ENST00000582844 KIAA1107Q9UPP5 1409 aa33.94■■■■□ 3.02
CSNK1D-221ENST00000582844 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
CSNK1D-221ENST00000582844 SPAG9O60271 1321 aaKnown RBP33.92■■■■□ 3.02
CSNK1D-221ENST00000582844 ZNF644Q9H582 1327 aaPredicted RBP33.9■■■■□ 3.02
CSNK1D-221ENST00000582844 CEBPAP49715 358 aaPredicted RBP33.89■■■■□ 3.02
CSNK1D-221ENST00000582844 AGLP35573 1532 aa33.89■■■■□ 3.02
CSNK1D-221ENST00000582844 VPS8Q8N3P4 1428 aa33.88■■■■□ 3.01
CSNK1D-221ENST00000582844 HSPA2P54652 639 aa33.84■■■■□ 3.01
CSNK1D-221ENST00000582844 SUPT6HQ7KZ85 1726 aaKnown RBP33.84■■■■□ 3.01
CSNK1D-221ENST00000582844 NCOA2Q15596 1464 aa33.83■■■■□ 3.01
CSNK1D-221ENST00000582844 ATP7AQ04656 1500 aa33.83■■■■□ 3.01
CSNK1D-221ENST00000582844 INO80Q9ULG1 1556 aaPredicted RBP33.8■■■■□ 3
CSNK1D-221ENST00000582844 MBD5Q9P267 1494 aa33.77■■■■□ 3
CSNK1D-221ENST00000582844 ILDR1Q86SU0 546 aaPredicted RBP33.77■■■■□ 3
CSNK1D-221ENST00000582844 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
CSNK1D-221ENST00000582844 LRRC9Q6ZRR7 1453 aa33.74■■■□□ 2.99
CSNK1D-221ENST00000582844 C3P01024 1663 aa33.73■■■□□ 2.99
CSNK1D-221ENST00000582844 PREX1Q8TCU6 1659 aa33.72■■■□□ 2.99
CSNK1D-221ENST00000582844 A2MP01023 1474 aa33.71■■■□□ 2.99
CSNK1D-221ENST00000582844 SETD1BQ9UPS6 1966 aaKnown RBP33.71■■■□□ 2.99
CSNK1D-221ENST00000582844 KANK4Q5T7N3 995 aaPredicted RBP33.69■■■□□ 2.98
CSNK1D-221ENST00000582844 CAMSAP2Q08AD1 1489 aa33.68■■■□□ 2.98
CSNK1D-221ENST00000582844 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
CSNK1D-221ENST00000582844 MAP3K1Q13233 1512 aa33.66■■■□□ 2.98
CSNK1D-221ENST00000582844 ADGBQ8N7X0 1667 aa33.66■■■□□ 2.98
CSNK1D-221ENST00000582844 CNTLNQ9NXG0 1405 aa33.64■■■□□ 2.98
CSNK1D-221ENST00000582844 RTEL1-TNFRSF6BF6WH68 1400 aa33.63■■■□□ 2.97
CSNK1D-221ENST00000582844 CCDC141Q6ZP82 1450 aa33.61■■■□□ 2.97
CSNK1D-221ENST00000582844 RSPH4AQ5TD94 716 aa33.6■■■□□ 2.97
CSNK1D-221ENST00000582844 GGT6Q6P531 493 aa33.6■■■□□ 2.97
CSNK1D-221ENST00000582844 UHRF1BP1Q6BDS2 1440 aa33.6■■■□□ 2.97
CSNK1D-221ENST00000582844 MROH2AA6NES4 1674 aa33.58■■■□□ 2.97
CSNK1D-221ENST00000582844 CLTCQ00610 1675 aaKnown RBP33.56■■■□□ 2.96
CSNK1D-221ENST00000582844 ZMYM3Q14202 1370 aa33.56■■■□□ 2.96
CSNK1D-221ENST00000582844 DHX29Q7Z478 1369 aaKnown RBP33.54■■■□□ 2.96
CSNK1D-221ENST00000582844 ARHGEF5Q12774 1597 aa33.53■■■□□ 2.96
CSNK1D-221ENST00000582844 TSPY4P0CV99 314 aa33.5■■■□□ 2.95
CSNK1D-221ENST00000582844 TSPY10P0CW01 314 aa33.5■■■□□ 2.95
CSNK1D-221ENST00000582844 APLP2Q06481 763 aa33.49■■■□□ 2.95
CSNK1D-221ENST00000582844 MYOM3Q5VTT5 1437 aa33.48■■■□□ 2.95
CSNK1D-221ENST00000582844 STRCQ7RTU9 1775 aa33.48■■■□□ 2.95
CSNK1D-221ENST00000582844 PPP6R1Q9UPN7 881 aa33.47■■■□□ 2.95
CSNK1D-221ENST00000582844 NPATQ14207 1427 aa33.45■■■□□ 2.95
CSNK1D-221ENST00000582844 KIF3BO15066 747 aa33.45■■■□□ 2.95
CSNK1D-221ENST00000582844 MIA2Q96PC5 1412 aa33.45■■■□□ 2.94
CSNK1D-221ENST00000582844 FBXO41Q8TF61 875 aa33.4■■■□□ 2.94
CSNK1D-221ENST00000582844 DMRT2Q9Y5R5 561 aa33.38■■■□□ 2.93
CSNK1D-221ENST00000582844 PTPRKQ15262 1439 aa33.37■■■□□ 2.93
CSNK1D-221ENST00000582844 MAST1Q9Y2H9 1570 aa33.36■■■□□ 2.93
CSNK1D-221ENST00000582844 MYO3AQ8NEV4 1616 aa33.29■■■□□ 2.92
CSNK1D-221ENST00000582844 WASHC2CQ9Y4E1 1318 aa33.28■■■□□ 2.92
CSNK1D-221ENST00000582844 PTPN23Q9H3S7 1636 aa33.28■■■□□ 2.92
CSNK1D-221ENST00000582844 CERKQ8TCT0 537 aa33.27■■■□□ 2.92
CSNK1D-221ENST00000582844 CAMSAP1Q5T5Y3 1602 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms