RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 ARHGAP5Q13017 1502 aa30.07■■■□□ 2.4
LIMS2-218ENST00000582671 EFCAB2Q5VUJ9 269 aa30.06■■■□□ 2.4
LIMS2-218ENST00000582671 SCAPERQ9BY12 1400 aa30.05■■■□□ 2.4
LIMS2-218ENST00000582671 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
LIMS2-218ENST00000582671 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.4
LIMS2-218ENST00000582671 POGZQ7Z3K3 1410 aa30■■■□□ 2.39
LIMS2-218ENST00000582671 ZFYVE16Q7Z3T8 1539 aa29.95■■■□□ 2.38
LIMS2-218ENST00000582671 SIGLEC1Q9BZZ2 1709 aa29.94■■■□□ 2.38
LIMS2-218ENST00000582671 YEATS2Q9ULM3 1422 aa29.94■■■□□ 2.38
LIMS2-218ENST00000582671 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
LIMS2-218ENST00000582671 MTUS2Q5JR59 1369 aa29.92■■■□□ 2.38
LIMS2-218ENST00000582671 ABCC1P33527 1531 aa29.92■■■□□ 2.38
LIMS2-218ENST00000582671 GPATCH8Q9UKJ3 1502 aaKnown RBP29.92■■■□□ 2.38
LIMS2-218ENST00000582671 VPS8Q8N3P4 1428 aa29.92■■■□□ 2.38
LIMS2-218ENST00000582671 MAGI2Q86UL8 1455 aa29.92■■■□□ 2.38
LIMS2-218ENST00000582671 EHBP1L1Q8N3D4 1523 aa29.91■■■□□ 2.38
LIMS2-218ENST00000582671 ADAMTSL3P82987 1691 aa29.91■■■□□ 2.38
LIMS2-218ENST00000582671 ARHGEF12Q9NZN5 1544 aa29.91■■■□□ 2.38
LIMS2-218ENST00000582671 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
LIMS2-218ENST00000582671 KDM5CP41229 1560 aa29.9■■■□□ 2.38
LIMS2-218ENST00000582671 TIAM1Q13009 1591 aa29.88■■■□□ 2.37
LIMS2-218ENST00000582671 SAMD9LQ8IVG5 1584 aa29.88■■■□□ 2.37
LIMS2-218ENST00000582671 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
LIMS2-218ENST00000582671 AFAP1Q8N556 730 aa29.86■■■□□ 2.37
LIMS2-218ENST00000582671 TRAPPC8Q9Y2L5 1435 aa29.83■■■□□ 2.37
LIMS2-218ENST00000582671 ARID4BQ4LE39 1312 aaPredicted RBP29.82■■■□□ 2.36
LIMS2-218ENST00000582671 HECW2Q9P2P5 1572 aa29.81■■■□□ 2.36
LIMS2-218ENST00000582671 CCNB3Q8WWL7 1395 aa29.81■■■□□ 2.36
LIMS2-218ENST00000582671 SUPT6HQ7KZ85 1726 aaKnown RBP29.8■■■□□ 2.36
LIMS2-218ENST00000582671 ZNF777Q9ULD5 760 aaPredicted RBP29.8■■■□□ 2.36
LIMS2-218ENST00000582671 MADDQ8WXG6 1647 aa29.79■■■□□ 2.36
LIMS2-218ENST00000582671 ATP10AO60312 1499 aa29.78■■■□□ 2.36
LIMS2-218ENST00000582671 SYCP2Q9BX26 1530 aa29.77■■■□□ 2.36
LIMS2-218ENST00000582671 ABCA6Q8N139 1617 aa29.76■■■□□ 2.35
LIMS2-218ENST00000582671 DIP2CQ9Y2E4 1556 aa29.76■■■□□ 2.35
LIMS2-218ENST00000582671 MLH3Q9UHC1 1453 aa29.75■■■□□ 2.35
LIMS2-218ENST00000582671 KIDINS220Q9ULH0 1771 aa29.75■■■□□ 2.35
LIMS2-218ENST00000582671 CFDP1Q9UEE9 299 aaPredicted RBP29.75■■■□□ 2.35
LIMS2-218ENST00000582671 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
LIMS2-218ENST00000582671 C9orf84Q5VXU9 1444 aa29.73■■■□□ 2.35
LIMS2-218ENST00000582671 RIMS1Q86UR5 1692 aaKnown RBP29.72■■■□□ 2.35
LIMS2-218ENST00000582671 LRRC9Q6ZRR7 1453 aa29.72■■■□□ 2.35
LIMS2-218ENST00000582671 PTPRMP28827 1452 aa29.71■■■□□ 2.35
LIMS2-218ENST00000582671 MAP3K1Q13233 1512 aa29.71■■■□□ 2.35
LIMS2-218ENST00000582671 HNRNPMP52272 730 aaKnown RBP eCLIP29.7■■■□□ 2.35
LIMS2-218ENST00000582671 MYT1LQ9UL68 1186 aa29.69■■■□□ 2.34
LIMS2-218ENST00000582671 KIAA1107Q9UPP5 1409 aa29.68■■■□□ 2.34
LIMS2-218ENST00000582671 PLEKHH2Q8IVE3 1493 aa29.68■■■□□ 2.34
LIMS2-218ENST00000582671 FER1L4A9Z1Z3 1794 aa29.67■■■□□ 2.34
LIMS2-218ENST00000582671 ZNF644Q9H582 1327 aaPredicted RBP29.67■■■□□ 2.34
LIMS2-218ENST00000582671 REREQ9P2R6 1566 aa29.66■■■□□ 2.34
LIMS2-218ENST00000582671 KANK4Q5T7N3 995 aaPredicted RBP29.65■■■□□ 2.34
LIMS2-218ENST00000582671 MLECQ14165 292 aa29.63■■■□□ 2.33
LIMS2-218ENST00000582671 INO80Q9ULG1 1556 aaPredicted RBP29.61■■■□□ 2.33
LIMS2-218ENST00000582671 MBD5Q9P267 1494 aa29.59■■■□□ 2.33
LIMS2-218ENST00000582671 ATP7AQ04656 1500 aa29.58■■■□□ 2.33
LIMS2-218ENST00000582671 SPAG9O60271 1321 aaKnown RBP29.57■■■□□ 2.32
LIMS2-218ENST00000582671 CAMSAP2Q08AD1 1489 aa29.55■■■□□ 2.32
LIMS2-218ENST00000582671 AGLP35573 1532 aa29.55■■■□□ 2.32
LIMS2-218ENST00000582671 ADGBQ8N7X0 1667 aa29.48■■■□□ 2.31
LIMS2-218ENST00000582671 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
LIMS2-218ENST00000582671 APLP2Q06481 763 aa29.46■■■□□ 2.31
LIMS2-218ENST00000582671 PLPPR3Q6T4P5 718 aa29.46■■■□□ 2.31
LIMS2-218ENST00000582671 CCDC141Q6ZP82 1450 aa29.45■■■□□ 2.31
LIMS2-218ENST00000582671 ARHGEF5Q12774 1597 aa29.44■■■□□ 2.3
LIMS2-218ENST00000582671 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
LIMS2-218ENST00000582671 A2MP01023 1474 aa29.43■■■□□ 2.3
LIMS2-218ENST00000582671 RTEL1-TNFRSF6BF6WH68 1400 aa29.41■■■□□ 2.3
LIMS2-218ENST00000582671 C3P01024 1663 aa29.39■■■□□ 2.3
LIMS2-218ENST00000582671 MIA2Q96PC5 1412 aa29.38■■■□□ 2.29
LIMS2-218ENST00000582671 LMTK3Q96Q04 1460 aa29.37■■■□□ 2.29
LIMS2-218ENST00000582671 RSPH4AQ5TD94 716 aa29.37■■■□□ 2.29
LIMS2-218ENST00000582671 CEBPAP49715 358 aaPredicted RBP29.36■■■□□ 2.29
LIMS2-218ENST00000582671 PTPN23Q9H3S7 1636 aa29.32■■■□□ 2.28
LIMS2-218ENST00000582671 MAST1Q9Y2H9 1570 aa29.31■■■□□ 2.28
LIMS2-218ENST00000582671 CLTCQ00610 1675 aaKnown RBP29.31■■■□□ 2.28
LIMS2-218ENST00000582671 MROH2AA6NES4 1674 aa29.3■■■□□ 2.28
LIMS2-218ENST00000582671 PREX1Q8TCU6 1659 aa29.3■■■□□ 2.28
LIMS2-218ENST00000582671 DHX29Q7Z478 1369 aaKnown RBP29.27■■■□□ 2.28
LIMS2-218ENST00000582671 SETD1BQ9UPS6 1966 aaKnown RBP29.27■■■□□ 2.28
LIMS2-218ENST00000582671 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.27
LIMS2-218ENST00000582671 TSPY4P0CV99 314 aa29.26■■■□□ 2.27
LIMS2-218ENST00000582671 TSPY10P0CW01 314 aa29.26■■■□□ 2.27
LIMS2-218ENST00000582671 ESF1Q9H501 851 aaKnown RBP29.25■■■□□ 2.27
LIMS2-218ENST00000582671 CNTLNQ9NXG0 1405 aa29.25■■■□□ 2.27
LIMS2-218ENST00000582671 FGD6Q6ZV73 1430 aa29.24■■■□□ 2.27
LIMS2-218ENST00000582671 GGT6Q6P531 493 aa29.23■■■□□ 2.27
LIMS2-218ENST00000582671 TCOF1Q13428 1488 aaKnown RBP29.22■■■□□ 2.27
LIMS2-218ENST00000582671 HSPA2P54652 639 aa29.2■■■□□ 2.26
LIMS2-218ENST00000582671 DNMT1P26358 1616 aaKnown RBP29.2■■■□□ 2.26
LIMS2-218ENST00000582671 ABCC5O15440 1437 aa29.18■■■□□ 2.26
LIMS2-218ENST00000582671 ZMYM3Q14202 1370 aa29.17■■■□□ 2.26
LIMS2-218ENST00000582671 KIF3BO15066 747 aa29.16■■■□□ 2.26
LIMS2-218ENST00000582671 DAPK1P53355 1430 aa29.13■■■□□ 2.25
LIMS2-218ENST00000582671 SHANK2Q9UPX8 1470 aa29.13■■■□□ 2.25
LIMS2-218ENST00000582671 PPP6R1Q9UPN7 881 aa29.11■■■□□ 2.25
LIMS2-218ENST00000582671 EIF2AK4Q9P2K8 1649 aaKnown RBP29.11■■■□□ 2.25
LIMS2-218ENST00000582671 RNF17Q9BXT8 1623 aaKnown RBP29.1■■■□□ 2.25
LIMS2-218ENST00000582671 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
LIMS2-218ENST00000582671 NPATQ14207 1427 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms