RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
CACNB1-210ENST00000582544 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
CACNB1-210ENST00000582544 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
CACNB1-210ENST00000582544 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
CACNB1-210ENST00000582544 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-210ENST00000582544 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
CACNB1-210ENST00000582544 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
CACNB1-210ENST00000582544 KDM5CP41229 1560 aa13.11□□□□□ -0.31
CACNB1-210ENST00000582544 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
CACNB1-210ENST00000582544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
CACNB1-210ENST00000582544 KCNA4P22459 653 aa13.11□□□□□ -0.31
CACNB1-210ENST00000582544 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
CACNB1-210ENST00000582544 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.32
CACNB1-210ENST00000582544 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
CACNB1-210ENST00000582544 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
CACNB1-210ENST00000582544 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
CACNB1-210ENST00000582544 SCAPERQ9BY12 1400 aa13.06□□□□□ -0.32
CACNB1-210ENST00000582544 REREQ9P2R6 1566 aa13.06□□□□□ -0.32
CACNB1-210ENST00000582544 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
CACNB1-210ENST00000582544 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
CACNB1-210ENST00000582544 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
CACNB1-210ENST00000582544 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
CACNB1-210ENST00000582544 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
CACNB1-210ENST00000582544 UBTFP17480 764 aaKnown RBP13.03□□□□□ -0.32
CACNB1-210ENST00000582544 ATP10AO60312 1499 aa13.03□□□□□ -0.32
CACNB1-210ENST00000582544 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
CACNB1-210ENST00000582544 ABCC1P33527 1531 aa13.03□□□□□ -0.32
CACNB1-210ENST00000582544 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
CACNB1-210ENST00000582544 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
CACNB1-210ENST00000582544 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.33
CACNB1-210ENST00000582544 ARHGAP5Q13017 1502 aa13.01□□□□□ -0.33
CACNB1-210ENST00000582544 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
CACNB1-210ENST00000582544 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
CACNB1-210ENST00000582544 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
CACNB1-210ENST00000582544 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
CACNB1-210ENST00000582544 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-210ENST00000582544 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
CACNB1-210ENST00000582544 CLIP1P30622 1438 aa12.98□□□□□ -0.33
CACNB1-210ENST00000582544 AGLP35573 1532 aa12.98□□□□□ -0.33
CACNB1-210ENST00000582544 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
CACNB1-210ENST00000582544 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
CACNB1-210ENST00000582544 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
CACNB1-210ENST00000582544 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
CACNB1-210ENST00000582544 C3P01024 1663 aa12.96□□□□□ -0.33
CACNB1-210ENST00000582544 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
CACNB1-210ENST00000582544 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
CACNB1-210ENST00000582544 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
CACNB1-210ENST00000582544 INO80Q9ULG1 1556 aaPredicted RBP12.91□□□□□ -0.34
CACNB1-210ENST00000582544 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
CACNB1-210ENST00000582544 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
CACNB1-210ENST00000582544 PLXNC1O60486 1568 aa12.9□□□□□ -0.34
CACNB1-210ENST00000582544 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
CACNB1-210ENST00000582544 HSPA2P54652 639 aa12.9□□□□□ -0.34
CACNB1-210ENST00000582544 FBXO41Q8TF61 875 aa12.9□□□□□ -0.34
CACNB1-210ENST00000582544 TIAM1Q13009 1591 aa12.87□□□□□ -0.35
CACNB1-210ENST00000582544 MLECQ14165 292 aa12.87□□□□□ -0.35
CACNB1-210ENST00000582544 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
CACNB1-210ENST00000582544 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
CACNB1-210ENST00000582544 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
CACNB1-210ENST00000582544 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
CACNB1-210ENST00000582544 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
CACNB1-210ENST00000582544 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.35
CACNB1-210ENST00000582544 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
CACNB1-210ENST00000582544 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
CACNB1-210ENST00000582544 MSH5O43196 834 aa12.82□□□□□ -0.36
CACNB1-210ENST00000582544 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
CACNB1-210ENST00000582544 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
CACNB1-210ENST00000582544 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
CACNB1-210ENST00000582544 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
CACNB1-210ENST00000582544 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
CACNB1-210ENST00000582544 NPATQ14207 1427 aa12.79□□□□□ -0.36
CACNB1-210ENST00000582544 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
CACNB1-210ENST00000582544 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
CACNB1-210ENST00000582544 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
CACNB1-210ENST00000582544 PTPRTO14522 1441 aa12.78□□□□□ -0.36
CACNB1-210ENST00000582544 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
CACNB1-210ENST00000582544 A2MP01023 1474 aa12.78□□□□□ -0.36
CACNB1-210ENST00000582544 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
CACNB1-210ENST00000582544 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
CACNB1-210ENST00000582544 SPAG9O60271 1321 aaKnown RBP12.76□□□□□ -0.37
CACNB1-210ENST00000582544 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
CACNB1-210ENST00000582544 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
CACNB1-210ENST00000582544 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
CACNB1-210ENST00000582544 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
CACNB1-210ENST00000582544 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
CACNB1-210ENST00000582544 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
CACNB1-210ENST00000582544 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
CACNB1-210ENST00000582544 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
CACNB1-210ENST00000582544 ARHGEF5Q12774 1597 aa12.73□□□□□ -0.37
CACNB1-210ENST00000582544 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
CACNB1-210ENST00000582544 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
CACNB1-210ENST00000582544 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
CACNB1-210ENST00000582544 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
CACNB1-210ENST00000582544 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
CACNB1-210ENST00000582544 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
CACNB1-210ENST00000582544 PLA2R1Q13018 1463 aa12.71□□□□□ -0.38
CACNB1-210ENST00000582544 TCOF1Q13428 1488 aaKnown RBP12.71□□□□□ -0.38
CACNB1-210ENST00000582544 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
CACNB1-210ENST00000582544 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
CACNB1-210ENST00000582544 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms