RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
NDEL1-212ENST00000582277 SLAIN1Q8ND83 568 aa8.96□□□□□ -0.98
NDEL1-212ENST00000582277 L3MBTL3Q96JM7 780 aaPredicted RBP8.96□□□□□ -0.98
NDEL1-212ENST00000582277 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
NDEL1-212ENST00000582277 MAMSTRQ6ZN01 415 aa8.94□□□□□ -0.98
NDEL1-212ENST00000582277 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
NDEL1-212ENST00000582277 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.93□□□□□ -0.98
NDEL1-212ENST00000582277 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
NDEL1-212ENST00000582277 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
NDEL1-212ENST00000582277 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
NDEL1-212ENST00000582277 GTPBP6O43824 516 aaPredicted RBP8.87□□□□□ -0.99
NDEL1-212ENST00000582277 CFAP44Q96MT7 982 aa8.87□□□□□ -0.99
NDEL1-212ENST00000582277 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
NDEL1-212ENST00000582277 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
NDEL1-212ENST00000582277 TMEM121BQ9BXQ6 578 aaPredicted RBP8.85□□□□□ -0.99
NDEL1-212ENST00000582277 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
NDEL1-212ENST00000582277 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
NDEL1-212ENST00000582277 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
NDEL1-212ENST00000582277 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.82□□□□□ -1
NDEL1-212ENST00000582277 TMEM132AQ24JP5 1023 aa8.81□□□□□ -1
NDEL1-212ENST00000582277 PODXL2Q9NZ53 605 aa8.8□□□□□ -1
NDEL1-212ENST00000582277 C2orf72A6NCS6 295 aa8.78□□□□□ -1
NDEL1-212ENST00000582277 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
NDEL1-212ENST00000582277 RYDENQ9NUL5 291 aaKnown RBP8.77□□□□□ -1.01
NDEL1-212ENST00000582277 KDM2AQ9Y2K7 1162 aa8.77□□□□□ -1.01
NDEL1-212ENST00000582277 TMC2Q8TDI7 906 aa8.76□□□□□ -1.01
NDEL1-212ENST00000582277 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
NDEL1-212ENST00000582277 CADPS2Q86UW7 1296 aa8.74□□□□□ -1.01
NDEL1-212ENST00000582277 ST18O60284 1047 aa8.73□□□□□ -1.01
NDEL1-212ENST00000582277 MYT1Q01538 1121 aa8.72□□□□□ -1.01
NDEL1-212ENST00000582277 MARVELD3Q96A59 401 aa8.71□□□□□ -1.02
NDEL1-212ENST00000582277 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
NDEL1-212ENST00000582277 KIF3CO14782 793 aa8.69□□□□□ -1.02
NDEL1-212ENST00000582277 SNPHO15079 494 aa8.69□□□□□ -1.02
NDEL1-212ENST00000582277 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
NDEL1-212ENST00000582277 ZNF710Q8N1W2 664 aa8.69□□□□□ -1.02
NDEL1-212ENST00000582277 DSG2Q14126 1118 aa8.68□□□□□ -1.02
NDEL1-212ENST00000582277 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.02
NDEL1-212ENST00000582277 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
NDEL1-212ENST00000582277 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
NDEL1-212ENST00000582277 PLPP6Q8IY26 295 aa8.67□□□□□ -1.02
NDEL1-212ENST00000582277 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
NDEL1-212ENST00000582277 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
NDEL1-212ENST00000582277 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
NDEL1-212ENST00000582277 ARSIQ5FYB1 569 aa8.65□□□□□ -1.02
NDEL1-212ENST00000582277 PDE4AP27815 886 aa8.64□□□□□ -1.03
NDEL1-212ENST00000582277 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
NDEL1-212ENST00000582277 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
NDEL1-212ENST00000582277 PPP1R15BQ5SWA1 713 aa8.62□□□□□ -1.03
NDEL1-212ENST00000582277 FOXK1P85037 733 aa8.61□□□□□ -1.03
NDEL1-212ENST00000582277 RIMBP2O15034 1052 aa8.6□□□□□ -1.03
NDEL1-212ENST00000582277 EMP3P54852 163 aa8.6□□□□□ -1.03
NDEL1-212ENST00000582277 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
NDEL1-212ENST00000582277 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
NDEL1-212ENST00000582277 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
NDEL1-212ENST00000582277 NUDT7P0C024 238 aa8.58□□□□□ -1.04
NDEL1-212ENST00000582277 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
NDEL1-212ENST00000582277 NBR1Q14596 966 aa8.57□□□□□ -1.04
NDEL1-212ENST00000582277 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
NDEL1-212ENST00000582277 HOXB1P14653 301 aaPredicted RBP8.56□□□□□ -1.04
NDEL1-212ENST00000582277 ERBB3P21860 1342 aa8.55□□□□□ -1.04
NDEL1-212ENST00000582277 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
NDEL1-212ENST00000582277 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
NDEL1-212ENST00000582277 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
NDEL1-212ENST00000582277 MFSD10Q14728 455 aa8.52□□□□□ -1.05
NDEL1-212ENST00000582277 VARS2Q5ST30 1063 aaKnown RBP8.52□□□□□ -1.05
NDEL1-212ENST00000582277 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
NDEL1-212ENST00000582277 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
NDEL1-212ENST00000582277 MMRN1Q13201 1228 aa8.5□□□□□ -1.05
NDEL1-212ENST00000582277 ZSWIM6Q9HCJ5 1215 aa8.5□□□□□ -1.05
NDEL1-212ENST00000582277 LHX6Q9UPM6 363 aa8.5□□□□□ -1.05
NDEL1-212ENST00000582277 SLC34A2O95436 690 aa8.49□□□□□ -1.05
NDEL1-212ENST00000582277 MAP3K9P80192 1104 aa8.49□□□□□ -1.05
NDEL1-212ENST00000582277 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
NDEL1-212ENST00000582277 PTCD2Q8WV60 388 aaKnown RBP8.49□□□□□ -1.05
NDEL1-212ENST00000582277 TBC1D12O60347 775 aa8.48□□□□□ -1.05
NDEL1-212ENST00000582277 OXER1Q8TDS5 423 aa8.48□□□□□ -1.05
NDEL1-212ENST00000582277 DPYSL4O14531 572 aa8.47□□□□□ -1.05
NDEL1-212ENST00000582277 ZNF316A6NFI3 1004 aaPredicted RBP8.46□□□□□ -1.06
NDEL1-212ENST00000582277 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
NDEL1-212ENST00000582277 EVI5O60447 810 aa8.45□□□□□ -1.06
NDEL1-212ENST00000582277 E2F4Q16254 413 aa8.44□□□□□ -1.06
NDEL1-212ENST00000582277 TRIM26Q12899 539 aaPredicted RBP8.43□□□□□ -1.06
NDEL1-212ENST00000582277 AXIN2Q9Y2T1 843 aa8.43□□□□□ -1.06
NDEL1-212ENST00000582277 CAMK2BQ13554 666 aa8.41□□□□□ -1.06
NDEL1-212ENST00000582277 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
NDEL1-212ENST00000582277 ZNF454Q8N9F8 522 aa8.4□□□□□ -1.06
NDEL1-212ENST00000582277 DDX12PQ92771 950 aa8.38□□□□□ -1.07
NDEL1-212ENST00000582277 ZNF687Q8N1G0 1237 aa8.37□□□□□ -1.07
NDEL1-212ENST00000582277 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
NDEL1-212ENST00000582277 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
NDEL1-212ENST00000582277 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
NDEL1-212ENST00000582277 UBTFP17480 764 aaKnown RBP8.36□□□□□ -1.07
NDEL1-212ENST00000582277 PSEN2P49810 448 aa8.35□□□□□ -1.07
NDEL1-212ENST00000582277 POTEEQ6S8J3 1075 aa8.35□□□□□ -1.07
NDEL1-212ENST00000582277 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
NDEL1-212ENST00000582277 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
NDEL1-212ENST00000582277 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
NDEL1-212ENST00000582277 PPP4R3BQ5MIZ7 849 aa8.34□□□□□ -1.07
NDEL1-212ENST00000582277 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms