RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
CCDC57-214ENST00000582040 TROQ12816 1431 aaPredicted RBP23.67■■□□□ 1.38
CCDC57-214ENST00000582040 SCAPERQ9BY12 1400 aa23.67■■□□□ 1.38
CCDC57-214ENST00000582040 CDK11AQ9UQ88 783 aaPredicted RBP23.66■■□□□ 1.38
CCDC57-214ENST00000582040 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
CCDC57-214ENST00000582040 MAGI2Q86UL8 1455 aa23.65■■□□□ 1.38
CCDC57-214ENST00000582040 CLIP1P30622 1438 aa23.63■■□□□ 1.37
CCDC57-214ENST00000582040 ILDR1Q86SU0 546 aaPredicted RBP23.62■■□□□ 1.37
CCDC57-214ENST00000582040 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
CCDC57-214ENST00000582040 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
CCDC57-214ENST00000582040 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
CCDC57-214ENST00000582040 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
CCDC57-214ENST00000582040 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
CCDC57-214ENST00000582040 LMTK3Q96Q04 1460 aa23.55■■□□□ 1.36
CCDC57-214ENST00000582040 FER1L4A9Z1Z3 1794 aa23.54■■□□□ 1.36
CCDC57-214ENST00000582040 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
CCDC57-214ENST00000582040 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
CCDC57-214ENST00000582040 KDM5CP41229 1560 aa23.53■■□□□ 1.36
CCDC57-214ENST00000582040 C9orf84Q5VXU9 1444 aa23.53■■□□□ 1.36
CCDC57-214ENST00000582040 ATP10AO60312 1499 aa23.52■■□□□ 1.36
CCDC57-214ENST00000582040 FYCO1Q9BQS8 1478 aa23.52■■□□□ 1.36
CCDC57-214ENST00000582040 MLECQ14165 292 aa23.5■■□□□ 1.35
CCDC57-214ENST00000582040 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
CCDC57-214ENST00000582040 ABCC1P33527 1531 aa23.48■■□□□ 1.35
CCDC57-214ENST00000582040 ARHGEF12Q9NZN5 1544 aa23.48■■□□□ 1.35
CCDC57-214ENST00000582040 DIP2CQ9Y2E4 1556 aa23.47■■□□□ 1.35
CCDC57-214ENST00000582040 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
CCDC57-214ENST00000582040 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
CCDC57-214ENST00000582040 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.34
CCDC57-214ENST00000582040 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
CCDC57-214ENST00000582040 REREQ9P2R6 1566 aa23.4■■□□□ 1.34
CCDC57-214ENST00000582040 MLH3Q9UHC1 1453 aa23.4■■□□□ 1.34
CCDC57-214ENST00000582040 TRAPPC8Q9Y2L5 1435 aa23.4■■□□□ 1.34
CCDC57-214ENST00000582040 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.33
CCDC57-214ENST00000582040 HSPA2P54652 639 aa23.38■■□□□ 1.33
CCDC57-214ENST00000582040 SAMD9LQ8IVG5 1584 aa23.35■■□□□ 1.33
CCDC57-214ENST00000582040 PREX1Q8TCU6 1659 aa23.34■■□□□ 1.33
CCDC57-214ENST00000582040 KIDINS220Q9ULH0 1771 aa23.34■■□□□ 1.33
CCDC57-214ENST00000582040 SYCP2Q9BX26 1530 aa23.33■■□□□ 1.32
CCDC57-214ENST00000582040 AGLP35573 1532 aa23.32■■□□□ 1.32
CCDC57-214ENST00000582040 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
CCDC57-214ENST00000582040 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
CCDC57-214ENST00000582040 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
CCDC57-214ENST00000582040 FBXO41Q8TF61 875 aa23.28■■□□□ 1.32
CCDC57-214ENST00000582040 MTUS2Q5JR59 1369 aa23.26■■□□□ 1.31
CCDC57-214ENST00000582040 C3P01024 1663 aa23.25■■□□□ 1.31
CCDC57-214ENST00000582040 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
CCDC57-214ENST00000582040 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
CCDC57-214ENST00000582040 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
CCDC57-214ENST00000582040 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
CCDC57-214ENST00000582040 PLEKHH2Q8IVE3 1493 aa23.22■■□□□ 1.31
CCDC57-214ENST00000582040 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
CCDC57-214ENST00000582040 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
CCDC57-214ENST00000582040 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
CCDC57-214ENST00000582040 KIAA1107Q9UPP5 1409 aa23.2■■□□□ 1.3
CCDC57-214ENST00000582040 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
CCDC57-214ENST00000582040 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
CCDC57-214ENST00000582040 HNRNPMP52272 730 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC57-214ENST00000582040 ESF1Q9H501 851 aaKnown RBP23.18■■□□□ 1.3
CCDC57-214ENST00000582040 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
CCDC57-214ENST00000582040 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
CCDC57-214ENST00000582040 PLXNC1O60486 1568 aa23.16■■□□□ 1.3
CCDC57-214ENST00000582040 SETD1BQ9UPS6 1966 aaKnown RBP23.15■■□□□ 1.3
CCDC57-214ENST00000582040 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
CCDC57-214ENST00000582040 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
CCDC57-214ENST00000582040 A2MP01023 1474 aa23.12■■□□□ 1.29
CCDC57-214ENST00000582040 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
CCDC57-214ENST00000582040 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
CCDC57-214ENST00000582040 CLTCQ00610 1675 aaKnown RBP23.08■■□□□ 1.29
CCDC57-214ENST00000582040 MBD5Q9P267 1494 aa23.07■■□□□ 1.28
CCDC57-214ENST00000582040 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
CCDC57-214ENST00000582040 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
CCDC57-214ENST00000582040 NPATQ14207 1427 aa23.05■■□□□ 1.28
CCDC57-214ENST00000582040 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
CCDC57-214ENST00000582040 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
CCDC57-214ENST00000582040 CAMSAP2Q08AD1 1489 aa23.02■■□□□ 1.28
CCDC57-214ENST00000582040 CCDC141Q6ZP82 1450 aa23■■□□□ 1.27
CCDC57-214ENST00000582040 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
CCDC57-214ENST00000582040 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
CCDC57-214ENST00000582040 PTPRTO14522 1441 aa22.99■■□□□ 1.27
CCDC57-214ENST00000582040 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
CCDC57-214ENST00000582040 ZNF142P52746 1687 aaPredicted RBP22.98■■□□□ 1.27
CCDC57-214ENST00000582040 GGT6Q6P531 493 aa22.98■■□□□ 1.27
CCDC57-214ENST00000582040 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
CCDC57-214ENST00000582040 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
CCDC57-214ENST00000582040 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
CCDC57-214ENST00000582040 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
CCDC57-214ENST00000582040 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
CCDC57-214ENST00000582040 DHX29Q7Z478 1369 aaKnown RBP22.93■■□□□ 1.26
CCDC57-214ENST00000582040 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
CCDC57-214ENST00000582040 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
CCDC57-214ENST00000582040 PPP6R1Q9UPN7 881 aa22.89■■□□□ 1.25
CCDC57-214ENST00000582040 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
CCDC57-214ENST00000582040 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
CCDC57-214ENST00000582040 FAM135AQ9P2D6 1515 aa22.87■■□□□ 1.25
CCDC57-214ENST00000582040 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
CCDC57-214ENST00000582040 KIF3BO15066 747 aa22.85■■□□□ 1.25
CCDC57-214ENST00000582040 RSPH4AQ5TD94 716 aa22.85■■□□□ 1.25
CCDC57-214ENST00000582040 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
CCDC57-214ENST00000582040 TCOF1Q13428 1488 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms