RNA–Protein interactions for RNA: ENST00000581593.1

CDK12-206, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-206ENST00000581593 C2orf72A6NCS6 295 aa10.3□□□□□ -0.76
CDK12-206ENST00000581593 FAM163AQ96GL9 167 aaPredicted RBP10.3□□□□□ -0.76
CDK12-206ENST00000581593 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
CDK12-206ENST00000581593 KIF3CO14782 793 aa10.24□□□□□ -0.77
CDK12-206ENST00000581593 SNPHO15079 494 aa10.24□□□□□ -0.77
CDK12-206ENST00000581593 NCKAP5LQ9HCH0 1330 aa10.22□□□□□ -0.77
CDK12-206ENST00000581593 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
CDK12-206ENST00000581593 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
CDK12-206ENST00000581593 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
CDK12-206ENST00000581593 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
CDK12-206ENST00000581593 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
CDK12-206ENST00000581593 ST18O60284 1047 aa10.19□□□□□ -0.78
CDK12-206ENST00000581593 PDE4AP27815 886 aa10.19□□□□□ -0.78
CDK12-206ENST00000581593 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
CDK12-206ENST00000581593 DSG2Q14126 1118 aa10.19□□□□□ -0.78
CDK12-206ENST00000581593 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
CDK12-206ENST00000581593 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
CDK12-206ENST00000581593 PLPP6Q8IY26 295 aa10.18□□□□□ -0.78
CDK12-206ENST00000581593 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
CDK12-206ENST00000581593 FOXK1P85037 733 aa10.15□□□□□ -0.78
CDK12-206ENST00000581593 PPP1R15BQ5SWA1 713 aa10.15□□□□□ -0.78
CDK12-206ENST00000581593 RIMBP2O15034 1052 aa10.14□□□□□ -0.79
CDK12-206ENST00000581593 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
CDK12-206ENST00000581593 MARVELD3Q96A59 401 aa10.13□□□□□ -0.79
CDK12-206ENST00000581593 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
CDK12-206ENST00000581593 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
CDK12-206ENST00000581593 UPF1Q92900 1129 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDK12-206ENST00000581593 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDK12-206ENST00000581593 POTEMA6NI47 508 aa10.08□□□□□ -0.8
CDK12-206ENST00000581593 EMP3P54852 163 aa10.08□□□□□ -0.8
CDK12-206ENST00000581593 MFSD10Q14728 455 aa10.08□□□□□ -0.8
CDK12-206ENST00000581593 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
CDK12-206ENST00000581593 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
CDK12-206ENST00000581593 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
CDK12-206ENST00000581593 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
CDK12-206ENST00000581593 SLC34A2O95436 690 aa10.05□□□□□ -0.8
CDK12-206ENST00000581593 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
CDK12-206ENST00000581593 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
CDK12-206ENST00000581593 NUDT7P0C024 238 aa10.04□□□□□ -0.8
CDK12-206ENST00000581593 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
CDK12-206ENST00000581593 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
CDK12-206ENST00000581593 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
CDK12-206ENST00000581593 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
CDK12-206ENST00000581593 TBC1D12O60347 775 aa10□□□□□ -0.81
CDK12-206ENST00000581593 ERBB3P21860 1342 aa10□□□□□ -0.81
CDK12-206ENST00000581593 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
CDK12-206ENST00000581593 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
CDK12-206ENST00000581593 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
CDK12-206ENST00000581593 DPYSL4O14531 572 aa9.96□□□□□ -0.82
CDK12-206ENST00000581593 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
CDK12-206ENST00000581593 E2F4Q16254 413 aa9.96□□□□□ -0.82
CDK12-206ENST00000581593 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
CDK12-206ENST00000581593 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
CDK12-206ENST00000581593 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
CDK12-206ENST00000581593 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
CDK12-206ENST00000581593 EVI5O60447 810 aa9.92□□□□□ -0.82
CDK12-206ENST00000581593 CDAN1Q8IWY9 1227 aa9.91□□□□□ -0.82
CDK12-206ENST00000581593 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
CDK12-206ENST00000581593 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.82
CDK12-206ENST00000581593 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
CDK12-206ENST00000581593 ZNF454Q8N9F8 522 aa9.86□□□□□ -0.83
CDK12-206ENST00000581593 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
CDK12-206ENST00000581593 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
CDK12-206ENST00000581593 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
CDK12-206ENST00000581593 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
CDK12-206ENST00000581593 DDX12PQ92771 950 aa9.82□□□□□ -0.84
CDK12-206ENST00000581593 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
CDK12-206ENST00000581593 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
CDK12-206ENST00000581593 PDIA6Q15084 440 aa9.81□□□□□ -0.84
CDK12-206ENST00000581593 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
CDK12-206ENST00000581593 FOSBP53539 338 aa9.8□□□□□ -0.84
CDK12-206ENST00000581593 JPH4Q96JJ6 628 aa9.79□□□□□ -0.84
CDK12-206ENST00000581593 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
CDK12-206ENST00000581593 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
CDK12-206ENST00000581593 PCDH10Q9P2E7 1040 aa9.79□□□□□ -0.84
CDK12-206ENST00000581593 SPDYE16A6NNV3 312 aaPredicted RBP9.78□□□□□ -0.84
CDK12-206ENST00000581593 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
CDK12-206ENST00000581593 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
CDK12-206ENST00000581593 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
CDK12-206ENST00000581593 PCDHGA10Q9Y5H3 936 aa9.77□□□□□ -0.85
CDK12-206ENST00000581593 POTEEQ6S8J3 1075 aa9.76□□□□□ -0.85
CDK12-206ENST00000581593 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
CDK12-206ENST00000581593 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
CDK12-206ENST00000581593 PSEN2P49810 448 aa9.75□□□□□ -0.85
CDK12-206ENST00000581593 NBR1Q14596 966 aa9.75□□□□□ -0.85
CDK12-206ENST00000581593 RBM33Q96EV2 1170 aaKnown RBP9.75□□□□□ -0.85
CDK12-206ENST00000581593 ADAM33Q9BZ11 813 aa9.75□□□□□ -0.85
CDK12-206ENST00000581593 PHF14O94880 888 aa9.74□□□□□ -0.85
CDK12-206ENST00000581593 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
CDK12-206ENST00000581593 TYW1BQ6NUM6 668 aa9.73□□□□□ -0.85
CDK12-206ENST00000581593 ARHGAP33O14559 1287 aa9.72□□□□□ -0.85
CDK12-206ENST00000581593 PBX2P40425 430 aa9.72□□□□□ -0.85
CDK12-206ENST00000581593 PTGER2P43116 358 aa9.72□□□□□ -0.85
CDK12-206ENST00000581593 SEMA3EO15041 775 aa9.71□□□□□ -0.86
CDK12-206ENST00000581593 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
CDK12-206ENST00000581593 LSM11P83369 360 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDK12-206ENST00000581593 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
CDK12-206ENST00000581593 BCL2L12Q9HB09 334 aa9.71□□□□□ -0.86
CDK12-206ENST00000581593 PTPREP23469 700 aa9.7□□□□□ -0.86
CDK12-206ENST00000581593 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms