RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 ADAMTSL3P82987 1691 aa34.45■■■■□ 3.11
CSNK1D-216ENST00000581108 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
CSNK1D-216ENST00000581108 BCORL1Q5H9F3 1711 aa34.41■■■■□ 3.1
CSNK1D-216ENST00000581108 ARHGAP5Q13017 1502 aa34.41■■■■□ 3.1
CSNK1D-216ENST00000581108 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
CSNK1D-216ENST00000581108 ZFYVE16Q7Z3T8 1539 aa34.4■■■■□ 3.1
CSNK1D-216ENST00000581108 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
CSNK1D-216ENST00000581108 CDC42BPBQ9Y5S2 1711 aa34.38■■■■□ 3.09
CSNK1D-216ENST00000581108 HECW2Q9P2P5 1572 aa34.36■■■■□ 3.09
CSNK1D-216ENST00000581108 PTPRMP28827 1452 aa34.33■■■■□ 3.09
CSNK1D-216ENST00000581108 MADDQ8WXG6 1647 aa34.32■■■■□ 3.08
CSNK1D-216ENST00000581108 SIGLEC1Q9BZZ2 1709 aa34.32■■■■□ 3.08
CSNK1D-216ENST00000581108 PREX2Q70Z35 1606 aa34.3■■■■□ 3.08
CSNK1D-216ENST00000581108 AFAP1Q8N556 730 aa34.29■■■■□ 3.08
CSNK1D-216ENST00000581108 CEP162Q5TB80 1403 aa34.27■■■■□ 3.08
CSNK1D-216ENST00000581108 CDC42BPAQ5VT25 1732 aa34.27■■■■□ 3.08
CSNK1D-216ENST00000581108 ZNF518AQ6AHZ1 1483 aa34.27■■■■□ 3.08
CSNK1D-216ENST00000581108 ATP10AO60312 1499 aa34.23■■■■□ 3.07
CSNK1D-216ENST00000581108 RIMS1Q86UR5 1692 aaKnown RBP34.22■■■■□ 3.07
CSNK1D-216ENST00000581108 KDM5CP41229 1560 aa34.21■■■■□ 3.07
CSNK1D-216ENST00000581108 LOC105371045A0A1W2PR82 267 aa34.19■■■■□ 3.06
CSNK1D-216ENST00000581108 MLECQ14165 292 aa34.19■■■■□ 3.06
CSNK1D-216ENST00000581108 ARHGEF12Q9NZN5 1544 aa34.19■■■■□ 3.06
CSNK1D-216ENST00000581108 MYT1LQ9UL68 1186 aa34.18■■■■□ 3.06
CSNK1D-216ENST00000581108 ABCC1P33527 1531 aa34.18■■■■□ 3.06
CSNK1D-216ENST00000581108 C9orf84Q5VXU9 1444 aa34.16■■■■□ 3.06
CSNK1D-216ENST00000581108 TRAPPC8Q9Y2L5 1435 aa34.16■■■■□ 3.06
CSNK1D-216ENST00000581108 ZNF777Q9ULD5 760 aaPredicted RBP34.15■■■■□ 3.06
CSNK1D-216ENST00000581108 ITSN2Q9NZM3 1697 aa34.15■■■■□ 3.06
CSNK1D-216ENST00000581108 GPATCH8Q9UKJ3 1502 aaKnown RBP34.14■■■■□ 3.06
CSNK1D-216ENST00000581108 MTUS2Q5JR59 1369 aa34.13■■■■□ 3.05
CSNK1D-216ENST00000581108 MLH3Q9UHC1 1453 aa34.1■■■■□ 3.05
CSNK1D-216ENST00000581108 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
CSNK1D-216ENST00000581108 SAMD9LQ8IVG5 1584 aa34.08■■■■□ 3.05
CSNK1D-216ENST00000581108 DIP2CQ9Y2E4 1556 aa34.08■■■■□ 3.05
CSNK1D-216ENST00000581108 FER1L4A9Z1Z3 1794 aa34.08■■■■□ 3.05
CSNK1D-216ENST00000581108 CCNB3Q8WWL7 1395 aa34.06■■■■□ 3.04
CSNK1D-216ENST00000581108 ABCA6Q8N139 1617 aa34.05■■■■□ 3.04
CSNK1D-216ENST00000581108 CFDP1Q9UEE9 299 aaPredicted RBP34.05■■■■□ 3.04
CSNK1D-216ENST00000581108 HNRNPMP52272 730 aaKnown RBP eCLIP34.03■■■■□ 3.044e-7■■■□□ 15
CSNK1D-216ENST00000581108 KIDINS220Q9ULH0 1771 aa34.01■■■■□ 3.04
CSNK1D-216ENST00000581108 EHBP1L1Q8N3D4 1523 aa34■■■■□ 3.03
CSNK1D-216ENST00000581108 SYCP2Q9BX26 1530 aa34■■■■□ 3.03
CSNK1D-216ENST00000581108 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
CSNK1D-216ENST00000581108 LMTK3Q96Q04 1460 aa33.95■■■■□ 3.03
CSNK1D-216ENST00000581108 TIAM1Q13009 1591 aa33.95■■■■□ 3.03
CSNK1D-216ENST00000581108 KIAA1107Q9UPP5 1409 aa33.94■■■■□ 3.02
CSNK1D-216ENST00000581108 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
CSNK1D-216ENST00000581108 SPAG9O60271 1321 aaKnown RBP33.92■■■■□ 3.02
CSNK1D-216ENST00000581108 ZNF644Q9H582 1327 aaPredicted RBP33.9■■■■□ 3.02
CSNK1D-216ENST00000581108 CEBPAP49715 358 aaPredicted RBP33.89■■■■□ 3.02
CSNK1D-216ENST00000581108 AGLP35573 1532 aa33.89■■■■□ 3.02
CSNK1D-216ENST00000581108 VPS8Q8N3P4 1428 aa33.88■■■■□ 3.01
CSNK1D-216ENST00000581108 HSPA2P54652 639 aa33.84■■■■□ 3.01
CSNK1D-216ENST00000581108 SUPT6HQ7KZ85 1726 aaKnown RBP33.84■■■■□ 3.01
CSNK1D-216ENST00000581108 NCOA2Q15596 1464 aa33.83■■■■□ 3.01
CSNK1D-216ENST00000581108 ATP7AQ04656 1500 aa33.83■■■■□ 3.01
CSNK1D-216ENST00000581108 INO80Q9ULG1 1556 aaPredicted RBP33.8■■■■□ 3
CSNK1D-216ENST00000581108 MBD5Q9P267 1494 aa33.77■■■■□ 3
CSNK1D-216ENST00000581108 ILDR1Q86SU0 546 aaPredicted RBP33.77■■■■□ 3
CSNK1D-216ENST00000581108 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
CSNK1D-216ENST00000581108 LRRC9Q6ZRR7 1453 aa33.74■■■□□ 2.99
CSNK1D-216ENST00000581108 C3P01024 1663 aa33.73■■■□□ 2.99
CSNK1D-216ENST00000581108 PREX1Q8TCU6 1659 aa33.72■■■□□ 2.99
CSNK1D-216ENST00000581108 A2MP01023 1474 aa33.71■■■□□ 2.99
CSNK1D-216ENST00000581108 SETD1BQ9UPS6 1966 aaKnown RBP33.71■■■□□ 2.99
CSNK1D-216ENST00000581108 KANK4Q5T7N3 995 aaPredicted RBP33.69■■■□□ 2.98
CSNK1D-216ENST00000581108 CAMSAP2Q08AD1 1489 aa33.68■■■□□ 2.98
CSNK1D-216ENST00000581108 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
CSNK1D-216ENST00000581108 MAP3K1Q13233 1512 aa33.66■■■□□ 2.98
CSNK1D-216ENST00000581108 ADGBQ8N7X0 1667 aa33.66■■■□□ 2.98
CSNK1D-216ENST00000581108 CNTLNQ9NXG0 1405 aa33.64■■■□□ 2.98
CSNK1D-216ENST00000581108 RTEL1-TNFRSF6BF6WH68 1400 aa33.63■■■□□ 2.97
CSNK1D-216ENST00000581108 CCDC141Q6ZP82 1450 aa33.61■■■□□ 2.97
CSNK1D-216ENST00000581108 RSPH4AQ5TD94 716 aa33.6■■■□□ 2.97
CSNK1D-216ENST00000581108 GGT6Q6P531 493 aa33.6■■■□□ 2.97
CSNK1D-216ENST00000581108 UHRF1BP1Q6BDS2 1440 aa33.6■■■□□ 2.97
CSNK1D-216ENST00000581108 MROH2AA6NES4 1674 aa33.58■■■□□ 2.97
CSNK1D-216ENST00000581108 CLTCQ00610 1675 aaKnown RBP33.56■■■□□ 2.96
CSNK1D-216ENST00000581108 ZMYM3Q14202 1370 aa33.56■■■□□ 2.96
CSNK1D-216ENST00000581108 DHX29Q7Z478 1369 aaKnown RBP33.54■■■□□ 2.96
CSNK1D-216ENST00000581108 ARHGEF5Q12774 1597 aa33.53■■■□□ 2.96
CSNK1D-216ENST00000581108 TSPY4P0CV99 314 aa33.5■■■□□ 2.95
CSNK1D-216ENST00000581108 TSPY10P0CW01 314 aa33.5■■■□□ 2.95
CSNK1D-216ENST00000581108 APLP2Q06481 763 aa33.49■■■□□ 2.95
CSNK1D-216ENST00000581108 MYOM3Q5VTT5 1437 aa33.48■■■□□ 2.95
CSNK1D-216ENST00000581108 STRCQ7RTU9 1775 aa33.48■■■□□ 2.95
CSNK1D-216ENST00000581108 PPP6R1Q9UPN7 881 aa33.47■■■□□ 2.95
CSNK1D-216ENST00000581108 NPATQ14207 1427 aa33.45■■■□□ 2.95
CSNK1D-216ENST00000581108 KIF3BO15066 747 aa33.45■■■□□ 2.95
CSNK1D-216ENST00000581108 MIA2Q96PC5 1412 aa33.45■■■□□ 2.94
CSNK1D-216ENST00000581108 FBXO41Q8TF61 875 aa33.4■■■□□ 2.94
CSNK1D-216ENST00000581108 DMRT2Q9Y5R5 561 aa33.38■■■□□ 2.93
CSNK1D-216ENST00000581108 PTPRKQ15262 1439 aa33.37■■■□□ 2.93
CSNK1D-216ENST00000581108 MAST1Q9Y2H9 1570 aa33.36■■■□□ 2.93
CSNK1D-216ENST00000581108 MYO3AQ8NEV4 1616 aa33.29■■■□□ 2.92
CSNK1D-216ENST00000581108 WASHC2CQ9Y4E1 1318 aa33.28■■■□□ 2.92
CSNK1D-216ENST00000581108 PTPN23Q9H3S7 1636 aa33.28■■■□□ 2.92
CSNK1D-216ENST00000581108 CERKQ8TCT0 537 aa33.27■■■□□ 2.92
CSNK1D-216ENST00000581108 CAMSAP1Q5T5Y3 1602 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms