RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
TRAPPC8-208ENST00000581057 L3MBTL3Q96JM7 780 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC8-208ENST00000581057 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
TRAPPC8-208ENST00000581057 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
TRAPPC8-208ENST00000581057 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
TRAPPC8-208ENST00000581057 E2F4Q16254 413 aa15.63■□□□□ 0.09
TRAPPC8-208ENST00000581057 MFSD10Q14728 455 aa15.61■□□□□ 0.09
TRAPPC8-208ENST00000581057 TMC2Q8TDI7 906 aa15.61■□□□□ 0.09
TRAPPC8-208ENST00000581057 TMEM121BQ9BXQ6 578 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC8-208ENST00000581057 GPHNQ9NQX3 736 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC8-208ENST00000581057 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
TRAPPC8-208ENST00000581057 C2orf72A6NCS6 295 aa15.53■□□□□ 0.08
TRAPPC8-208ENST00000581057 DSG2Q14126 1118 aa15.53■□□□□ 0.08
TRAPPC8-208ENST00000581057 C3orf67Q6ZVT6 689 aa15.5■□□□□ 0.07
TRAPPC8-208ENST00000581057 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
TRAPPC8-208ENST00000581057 FOXK1P85037 733 aa15.47■□□□□ 0.07
TRAPPC8-208ENST00000581057 TMEM92Q6UXU6 159 aa15.47■□□□□ 0.07
TRAPPC8-208ENST00000581057 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
TRAPPC8-208ENST00000581057 KIF3CO14782 793 aa15.45■□□□□ 0.06
TRAPPC8-208ENST00000581057 CAMK2BQ13554 666 aa15.44■□□□□ 0.06
TRAPPC8-208ENST00000581057 PRKCSHP14314 528 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC8-208ENST00000581057 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
TRAPPC8-208ENST00000581057 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
TRAPPC8-208ENST00000581057 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
TRAPPC8-208ENST00000581057 SEMA3EO15041 775 aa15.36■□□□□ 0.05
TRAPPC8-208ENST00000581057 DPYSL4O14531 572 aa15.35■□□□□ 0.05
TRAPPC8-208ENST00000581057 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRAPPC8-208ENST00000581057 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC8-208ENST00000581057 POTEB2H3BUK9 544 aa15.3■□□□□ 0.04
TRAPPC8-208ENST00000581057 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-208ENST00000581057 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
TRAPPC8-208ENST00000581057 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
TRAPPC8-208ENST00000581057 TESPA1A2RU30 521 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC8-208ENST00000581057 LMOD2Q6P5Q4 547 aa15.23■□□□□ 0.03
TRAPPC8-208ENST00000581057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAPPC8-208ENST00000581057 SPDYE16A6NNV3 312 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC8-208ENST00000581057 PDIA6Q15084 440 aa15.2■□□□□ 0.02
TRAPPC8-208ENST00000581057 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
TRAPPC8-208ENST00000581057 SCUBE2Q9NQ36 999 aa15.2■□□□□ 0.02
TRAPPC8-208ENST00000581057 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC8-208ENST00000581057 SMYD5Q6GMV2 418 aa15.19■□□□□ 0.02
TRAPPC8-208ENST00000581057 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
TRAPPC8-208ENST00000581057 TBC1D12O60347 775 aa15.16■□□□□ 0.02
TRAPPC8-208ENST00000581057 MAMSTRQ6ZN01 415 aa15.16■□□□□ 0.02
TRAPPC8-208ENST00000581057 PTCD2Q8WV60 388 aaKnown RBP15.12■□□□□ 0.01
TRAPPC8-208ENST00000581057 EVI5O60447 810 aa15.11■□□□□ 0.01
TRAPPC8-208ENST00000581057 GRXCR2A6NFK2 248 aa15.1■□□□□ 0.01
TRAPPC8-208ENST00000581057 SLC34A2O95436 690 aa15.1■□□□□ 0.01
TRAPPC8-208ENST00000581057 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
TRAPPC8-208ENST00000581057 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
TRAPPC8-208ENST00000581057 DDX12PQ92771 950 aa15.06■□□□□ 0
TRAPPC8-208ENST00000581057 PCDHGA4Q9Y5G9 962 aa15.06■□□□□ 0
TRAPPC8-208ENST00000581057 DOK7Q18PE1 504 aa15.03■□□□□ -0
TRAPPC8-208ENST00000581057 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
TRAPPC8-208ENST00000581057 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC8-208ENST00000581057 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
TRAPPC8-208ENST00000581057 PTGER2P43116 358 aa14.98□□□□□ -0.01
TRAPPC8-208ENST00000581057 ZNF710Q8N1W2 664 aa14.98□□□□□ -0.01
TRAPPC8-208ENST00000581057 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
TRAPPC8-208ENST00000581057 LHX8Q68G74 356 aa14.97□□□□□ -0.01
TRAPPC8-208ENST00000581057 GPIHBP1Q8IV16 184 aa14.97□□□□□ -0.01
TRAPPC8-208ENST00000581057 KHSRPQ92945 711 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAPPC8-208ENST00000581057 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
TRAPPC8-208ENST00000581057 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC8-208ENST00000581057 NUDT7P0C024 238 aa14.94□□□□□ -0.02
TRAPPC8-208ENST00000581057 OSBPP22059 807 aa14.94□□□□□ -0.02
TRAPPC8-208ENST00000581057 NUTM2FA1L443 756 aa14.92□□□□□ -0.02
TRAPPC8-208ENST00000581057 SNPHO15079 494 aa14.9□□□□□ -0.02
TRAPPC8-208ENST00000581057 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
TRAPPC8-208ENST00000581057 ZSWIM6Q9HCJ5 1215 aa14.88□□□□□ -0.03
TRAPPC8-208ENST00000581057 PRIM1P49642 420 aaKnown RBP14.87□□□□□ -0.03
TRAPPC8-208ENST00000581057 PHF14O94880 888 aa14.86□□□□□ -0.03
TRAPPC8-208ENST00000581057 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
TRAPPC8-208ENST00000581057 KDM4FA0A1W2PPD8 638 aa14.85□□□□□ -0.03
TRAPPC8-208ENST00000581057 PCDHGA10Q9Y5H3 936 aa14.85□□□□□ -0.03
TRAPPC8-208ENST00000581057 ZMYND10O75800 440 aa14.84□□□□□ -0.03
TRAPPC8-208ENST00000581057 EPAS1Q99814 870 aa14.84□□□□□ -0.03
TRAPPC8-208ENST00000581057 SLC24A3Q9HC58 644 aa14.83□□□□□ -0.04
TRAPPC8-208ENST00000581057 MAP3K7O43318 606 aa14.82□□□□□ -0.04
TRAPPC8-208ENST00000581057 ZNF454Q8N9F8 522 aa14.82□□□□□ -0.04
TRAPPC8-208ENST00000581057 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
TRAPPC8-208ENST00000581057 TYW1BQ6NUM6 668 aa14.81□□□□□ -0.04
TRAPPC8-208ENST00000581057 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
TRAPPC8-208ENST00000581057 BARGINQ6ZT62 677 aa14.8□□□□□ -0.04
TRAPPC8-208ENST00000581057 EN1Q05925 392 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC8-208ENST00000581057 LHX6Q9UPM6 363 aa14.79□□□□□ -0.04
TRAPPC8-208ENST00000581057 FOSBP53539 338 aa14.78□□□□□ -0.04
TRAPPC8-208ENST00000581057 GPR37O15354 613 aa14.77□□□□□ -0.05
TRAPPC8-208ENST00000581057 CDHR5Q9HBB8 845 aa14.76□□□□□ -0.05
TRAPPC8-208ENST00000581057 FCHSD2O94868 740 aa14.75□□□□□ -0.05
TRAPPC8-208ENST00000581057 HOXB1P14653 301 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC8-208ENST00000581057 TSR1Q2NL82 804 aaKnown RBP14.75□□□□□ -0.05
TRAPPC8-208ENST00000581057 FBXW7Q969H0 707 aa14.75□□□□□ -0.05
TRAPPC8-208ENST00000581057 ZDHHC16Q969W1 377 aa14.75□□□□□ -0.05
TRAPPC8-208ENST00000581057 GNPATO15228 680 aa14.7□□□□□ -0.06
TRAPPC8-208ENST00000581057 PTGDRQ13258 359 aa14.7□□□□□ -0.06
TRAPPC8-208ENST00000581057 ADAM33Q9BZ11 813 aa14.7□□□□□ -0.06
TRAPPC8-208ENST00000581057 HIC1Q14526 733 aa14.69□□□□□ -0.06
TRAPPC8-208ENST00000581057 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
TRAPPC8-208ENST00000581057 FECHP22830 423 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms