RNA–Protein interactions for RNA: ENST00000580896.1

MED13-203, Transcript of mediator complex subunit 13, humanhuman

TSL 3

Gene MED13, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-203ENST00000580896 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
MED13-203ENST00000580896 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
MED13-203ENST00000580896 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
MED13-203ENST00000580896 RAPGEF3O95398 923 aa14.05□□□□□ -0.16
MED13-203ENST00000580896 ARHGAP5Q13017 1502 aa14.05□□□□□ -0.16
MED13-203ENST00000580896 ABCC1P33527 1531 aa14.04□□□□□ -0.16
MED13-203ENST00000580896 KDM5CP41229 1560 aa14.04□□□□□ -0.16
MED13-203ENST00000580896 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
MED13-203ENST00000580896 SCAPERQ9BY12 1400 aa14.02□□□□□ -0.16
MED13-203ENST00000580896 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
MED13-203ENST00000580896 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
MED13-203ENST00000580896 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
MED13-203ENST00000580896 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
MED13-203ENST00000580896 EFCAB2Q5VUJ9 269 aa14□□□□□ -0.17
MED13-203ENST00000580896 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
MED13-203ENST00000580896 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
MED13-203ENST00000580896 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
MED13-203ENST00000580896 YEATS2Q9ULM3 1422 aa13.99□□□□□ -0.17
MED13-203ENST00000580896 ZNF518AQ6AHZ1 1483 aa13.99□□□□□ -0.17
MED13-203ENST00000580896 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
MED13-203ENST00000580896 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
MED13-203ENST00000580896 ADAMTSL3P82987 1691 aa13.97□□□□□ -0.17
MED13-203ENST00000580896 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.18
MED13-203ENST00000580896 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
MED13-203ENST00000580896 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
MED13-203ENST00000580896 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
MED13-203ENST00000580896 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
MED13-203ENST00000580896 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
MED13-203ENST00000580896 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
MED13-203ENST00000580896 DIP2CQ9Y2E4 1556 aa13.94□□□□□ -0.18
MED13-203ENST00000580896 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
MED13-203ENST00000580896 REREQ9P2R6 1566 aa13.93□□□□□ -0.18
MED13-203ENST00000580896 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
MED13-203ENST00000580896 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
MED13-203ENST00000580896 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
MED13-203ENST00000580896 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
MED13-203ENST00000580896 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
MED13-203ENST00000580896 KIDINS220Q9ULH0 1771 aa13.91□□□□□ -0.18
MED13-203ENST00000580896 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.18
MED13-203ENST00000580896 MADDQ8WXG6 1647 aa13.9□□□□□ -0.18
MED13-203ENST00000580896 ATP10AO60312 1499 aa13.9□□□□□ -0.18
MED13-203ENST00000580896 INO80Q9ULG1 1556 aaPredicted RBP13.9□□□□□ -0.18
MED13-203ENST00000580896 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
MED13-203ENST00000580896 MBD5Q9P267 1494 aa13.88□□□□□ -0.19
MED13-203ENST00000580896 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
MED13-203ENST00000580896 CAMSAP2Q08AD1 1489 aa13.86□□□□□ -0.19
MED13-203ENST00000580896 AGLP35573 1532 aa13.85□□□□□ -0.19
MED13-203ENST00000580896 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
MED13-203ENST00000580896 KANK4Q5T7N3 995 aaPredicted RBP13.85□□□□□ -0.19
MED13-203ENST00000580896 PTPRMP28827 1452 aa13.85□□□□□ -0.19
MED13-203ENST00000580896 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
MED13-203ENST00000580896 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
MED13-203ENST00000580896 RIMS1Q86UR5 1692 aaKnown RBP13.83□□□□□ -0.2
MED13-203ENST00000580896 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.2
MED13-203ENST00000580896 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
MED13-203ENST00000580896 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
MED13-203ENST00000580896 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
MED13-203ENST00000580896 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
MED13-203ENST00000580896 HNRNPMP52272 730 aaKnown RBP eCLIP13.8□□□□□ -0.2
MED13-203ENST00000580896 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
MED13-203ENST00000580896 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
MED13-203ENST00000580896 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
MED13-203ENST00000580896 RTEL1-TNFRSF6BF6WH68 1400 aa13.78□□□□□ -0.2
MED13-203ENST00000580896 ADGBQ8N7X0 1667 aa13.77□□□□□ -0.21
MED13-203ENST00000580896 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.21
MED13-203ENST00000580896 A2MP01023 1474 aa13.76□□□□□ -0.21
MED13-203ENST00000580896 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
MED13-203ENST00000580896 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
MED13-203ENST00000580896 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
MED13-203ENST00000580896 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
MED13-203ENST00000580896 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
MED13-203ENST00000580896 MLECQ14165 292 aa13.71□□□□□ -0.21
MED13-203ENST00000580896 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.21
MED13-203ENST00000580896 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
MED13-203ENST00000580896 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
MED13-203ENST00000580896 DNMT1P26358 1616 aaKnown RBP13.7□□□□□ -0.22
MED13-203ENST00000580896 C3P01024 1663 aa13.69□□□□□ -0.22
MED13-203ENST00000580896 RSPH4AQ5TD94 716 aa13.69□□□□□ -0.22
MED13-203ENST00000580896 ABCC5O15440 1437 aa13.68□□□□□ -0.22
MED13-203ENST00000580896 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
MED13-203ENST00000580896 APLP2Q06481 763 aa13.68□□□□□ -0.22
MED13-203ENST00000580896 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
MED13-203ENST00000580896 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
MED13-203ENST00000580896 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
MED13-203ENST00000580896 DAPK1P53355 1430 aa13.65□□□□□ -0.22
MED13-203ENST00000580896 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
MED13-203ENST00000580896 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
MED13-203ENST00000580896 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
MED13-203ENST00000580896 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
MED13-203ENST00000580896 KDM5DQ9BY66 1539 aa13.61□□□□□ -0.23
MED13-203ENST00000580896 DUOX2Q9NRD8 1548 aa13.61□□□□□ -0.23
MED13-203ENST00000580896 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
MED13-203ENST00000580896 NPATQ14207 1427 aa13.61□□□□□ -0.23
MED13-203ENST00000580896 ADGRL2O95490 1459 aa13.61□□□□□ -0.23
MED13-203ENST00000580896 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
MED13-203ENST00000580896 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
MED13-203ENST00000580896 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
MED13-203ENST00000580896 ZMYM3Q14202 1370 aa13.58□□□□□ -0.23
MED13-203ENST00000580896 KIF15Q9NS87 1388 aa13.58□□□□□ -0.23
MED13-203ENST00000580896 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms