RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
RN7SL339P-201ENST00000580597 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
RN7SL339P-201ENST00000580597 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
RN7SL339P-201ENST00000580597 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
RN7SL339P-201ENST00000580597 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
RN7SL339P-201ENST00000580597 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
RN7SL339P-201ENST00000580597 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
RN7SL339P-201ENST00000580597 SNPHO15079 494 aa13.58□□□□□ -0.24
RN7SL339P-201ENST00000580597 PDE4AP27815 886 aa13.56□□□□□ -0.24
RN7SL339P-201ENST00000580597 FOXK1P85037 733 aa13.56□□□□□ -0.24
RN7SL339P-201ENST00000580597 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
RN7SL339P-201ENST00000580597 MFSD10Q14728 455 aa13.53□□□□□ -0.24
RN7SL339P-201ENST00000580597 DSG2Q14126 1118 aa13.52□□□□□ -0.25
RN7SL339P-201ENST00000580597 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
RN7SL339P-201ENST00000580597 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
RN7SL339P-201ENST00000580597 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
RN7SL339P-201ENST00000580597 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 LCE2DQ5TA82 110 aaPredicted RBP13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
RN7SL339P-201ENST00000580597 SLC34A2O95436 690 aa13.45□□□□□ -0.26
RN7SL339P-201ENST00000580597 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
RN7SL339P-201ENST00000580597 ST18O60284 1047 aa13.44□□□□□ -0.26
RN7SL339P-201ENST00000580597 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
RN7SL339P-201ENST00000580597 ZSWIM6Q9HCJ5 1215 aa13.43□□□□□ -0.26
RN7SL339P-201ENST00000580597 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
RN7SL339P-201ENST00000580597 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
RN7SL339P-201ENST00000580597 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
RN7SL339P-201ENST00000580597 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
RN7SL339P-201ENST00000580597 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
RN7SL339P-201ENST00000580597 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
RN7SL339P-201ENST00000580597 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
RN7SL339P-201ENST00000580597 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
RN7SL339P-201ENST00000580597 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 TBC1D12O60347 775 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 EMP3P54852 163 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 E2F4Q16254 413 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
RN7SL339P-201ENST00000580597 POTEMA6NI47 508 aa13.24□□□□□ -0.29
RN7SL339P-201ENST00000580597 NUDT7P0C024 238 aa13.23□□□□□ -0.29
RN7SL339P-201ENST00000580597 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
RN7SL339P-201ENST00000580597 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
RN7SL339P-201ENST00000580597 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
RN7SL339P-201ENST00000580597 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
RN7SL339P-201ENST00000580597 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
RN7SL339P-201ENST00000580597 DPYSL4O14531 572 aa13.17□□□□□ -0.3
RN7SL339P-201ENST00000580597 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
RN7SL339P-201ENST00000580597 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
RN7SL339P-201ENST00000580597 ERBB3P21860 1342 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 EVI5O60447 810 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 PDIA6Q15084 440 aa13.12□□□□□ -0.31
RN7SL339P-201ENST00000580597 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
RN7SL339P-201ENST00000580597 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
RN7SL339P-201ENST00000580597 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RN7SL339P-201ENST00000580597 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
RN7SL339P-201ENST00000580597 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
RN7SL339P-201ENST00000580597 PTGER2P43116 358 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 FOSBP53539 338 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 PCDH10Q9P2E7 1040 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
RN7SL339P-201ENST00000580597 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
RN7SL339P-201ENST00000580597 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
RN7SL339P-201ENST00000580597 PHF14O94880 888 aa12.98□□□□□ -0.33
RN7SL339P-201ENST00000580597 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
RN7SL339P-201ENST00000580597 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
RN7SL339P-201ENST00000580597 PBX2P40425 430 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 DDX12PQ92771 950 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 EPAS1Q99814 870 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
RN7SL339P-201ENST00000580597 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
RN7SL339P-201ENST00000580597 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
RN7SL339P-201ENST00000580597 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
RN7SL339P-201ENST00000580597 NBR1Q14596 966 aa12.89□□□□□ -0.35
RN7SL339P-201ENST00000580597 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
RN7SL339P-201ENST00000580597 SEMA3EO15041 775 aa12.87□□□□□ -0.35
RN7SL339P-201ENST00000580597 MLLT3P42568 568 aaPredicted RBP12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 OSBPP22059 807 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 PTPREP23469 700 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms