RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 ASXL2Q76L83 1435 aa9.74□□□□□ -0.85
RTTN-204ENST00000579986 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
RTTN-204ENST00000579986 PLCH2O75038 1416 aa9.73□□□□□ -0.85
RTTN-204ENST00000579986 MAST1Q9Y2H9 1570 aa9.73□□□□□ -0.85
RTTN-204ENST00000579986 ADGBQ8N7X0 1667 aa9.73□□□□□ -0.85
RTTN-204ENST00000579986 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
RTTN-204ENST00000579986 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
RTTN-204ENST00000579986 MAP3K4Q9Y6R4 1608 aa9.72□□□□□ -0.85
RTTN-204ENST00000579986 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
RTTN-204ENST00000579986 ROCK1Q13464 1354 aa9.72□□□□□ -0.85
RTTN-204ENST00000579986 HRCP23327 699 aa9.72□□□□□ -0.85
RTTN-204ENST00000579986 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
RTTN-204ENST00000579986 HFM1A2PYH4 1435 aa9.71□□□□□ -0.85
RTTN-204ENST00000579986 ABCC5O15440 1437 aa9.71□□□□□ -0.85
RTTN-204ENST00000579986 DAPK1P53355 1430 aa9.71□□□□□ -0.85
RTTN-204ENST00000579986 ABCC1P33527 1531 aa9.7□□□□□ -0.86
RTTN-204ENST00000579986 PLEKHH2Q8IVE3 1493 aa9.7□□□□□ -0.86
RTTN-204ENST00000579986 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
RTTN-204ENST00000579986 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
RTTN-204ENST00000579986 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
RTTN-204ENST00000579986 NAIPQ13075 1403 aa9.68□□□□□ -0.86
RTTN-204ENST00000579986 PLXNC1O60486 1568 aa9.67□□□□□ -0.86
RTTN-204ENST00000579986 ARHGEF12Q9NZN5 1544 aa9.67□□□□□ -0.86
RTTN-204ENST00000579986 SETD5Q9C0A6 1442 aa9.67□□□□□ -0.86
RTTN-204ENST00000579986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.67□□□□□ -0.86
RTTN-204ENST00000579986 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
RTTN-204ENST00000579986 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
RTTN-204ENST00000579986 PPRC1Q5VV67 1664 aaKnown RBP9.65□□□□□ -0.86
RTTN-204ENST00000579986 CFDP1Q9UEE9 299 aaPredicted RBP9.65□□□□□ -0.86
RTTN-204ENST00000579986 CCDC141Q6ZP82 1450 aa9.65□□□□□ -0.86
RTTN-204ENST00000579986 SYCP2Q9BX26 1530 aa9.65□□□□□ -0.87
RTTN-204ENST00000579986 ZNF644Q9H582 1327 aaPredicted RBP9.64□□□□□ -0.87
RTTN-204ENST00000579986 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
RTTN-204ENST00000579986 KIF13AQ9H1H9 1805 aa9.64□□□□□ -0.87
RTTN-204ENST00000579986 INO80Q9ULG1 1556 aaPredicted RBP9.64□□□□□ -0.87
RTTN-204ENST00000579986 NCOA1Q15788 1441 aa9.63□□□□□ -0.87
RTTN-204ENST00000579986 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
RTTN-204ENST00000579986 NEO1Q92859 1461 aa9.63□□□□□ -0.87
RTTN-204ENST00000579986 KDM6BO15054 1643 aa9.63□□□□□ -0.87
RTTN-204ENST00000579986 FAM50AQ14320 339 aaKnown RBP9.63□□□□□ -0.87
RTTN-204ENST00000579986 KDM5CP41229 1560 aa9.63□□□□□ -0.87
RTTN-204ENST00000579986 FANCAO15360 1455 aa9.62□□□□□ -0.87
RTTN-204ENST00000579986 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
RTTN-204ENST00000579986 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
RTTN-204ENST00000579986 KDM5DQ9BY66 1539 aa9.61□□□□□ -0.87
RTTN-204ENST00000579986 DHX57Q6P158 1386 aaKnown RBP9.61□□□□□ -0.87
RTTN-204ENST00000579986 CLSPNQ9HAW4 1339 aa9.61□□□□□ -0.87
RTTN-204ENST00000579986 C9orf84Q5VXU9 1444 aa9.61□□□□□ -0.87
RTTN-204ENST00000579986 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
RTTN-204ENST00000579986 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
RTTN-204ENST00000579986 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
RTTN-204ENST00000579986 BCORL1Q5H9F3 1711 aa9.6□□□□□ -0.87
RTTN-204ENST00000579986 CD109Q6YHK3 1445 aa9.6□□□□□ -0.87
RTTN-204ENST00000579986 EFCAB2Q5VUJ9 269 aa9.59□□□□□ -0.87
RTTN-204ENST00000579986 RICTORQ6R327 1708 aa9.59□□□□□ -0.87
RTTN-204ENST00000579986 UNC13BO14795 1591 aa9.59□□□□□ -0.87
RTTN-204ENST00000579986 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
RTTN-204ENST00000579986 MAGI2Q86UL8 1455 aa9.58□□□□□ -0.88
RTTN-204ENST00000579986 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
RTTN-204ENST00000579986 FRMPD1Q5SYB0 1578 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 DEPDC5O75140 1603 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 ANKRD30AQ9BXX3 1397 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 KIDINS220Q9ULH0 1771 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
RTTN-204ENST00000579986 ZMYM4Q5VZL5 1548 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 DUOX2Q9NRD8 1548 aa9.57□□□□□ -0.88
RTTN-204ENST00000579986 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
RTTN-204ENST00000579986 MLH3Q9UHC1 1453 aa9.56□□□□□ -0.88
RTTN-204ENST00000579986 ERBINQ96RT1 1412 aa9.56□□□□□ -0.88
RTTN-204ENST00000579986 ZNF518AQ6AHZ1 1483 aa9.56□□□□□ -0.88
RTTN-204ENST00000579986 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
RTTN-204ENST00000579986 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
RTTN-204ENST00000579986 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
RTTN-204ENST00000579986 ZEB1P37275 1124 aaPredicted RBP9.54□□□□□ -0.88
RTTN-204ENST00000579986 VWDEQ8N2E2 1590 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 IQGAP3Q86VI3 1631 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 PZPP20742 1482 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 ANKRD50Q9ULJ7 1429 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 REREQ9P2R6 1566 aa9.53□□□□□ -0.88
RTTN-204ENST00000579986 DNAJC5Q9H3Z4 198 aa9.52□□□□□ -0.88
RTTN-204ENST00000579986 RNF17Q9BXT8 1623 aaKnown RBP9.52□□□□□ -0.89
RTTN-204ENST00000579986 ITGAEP38570 1179 aa9.52□□□□□ -0.89
RTTN-204ENST00000579986 KIF15Q9NS87 1388 aa9.52□□□□□ -0.89
RTTN-204ENST00000579986 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
RTTN-204ENST00000579986 ABCA6Q8N139 1617 aa9.51□□□□□ -0.89
RTTN-204ENST00000579986 MROH1Q8NDA8 1641 aa9.51□□□□□ -0.89
RTTN-204ENST00000579986 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
RTTN-204ENST00000579986 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
RTTN-204ENST00000579986 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
RTTN-204ENST00000579986 DIP2CQ9Y2E4 1556 aa9.49□□□□□ -0.89
RTTN-204ENST00000579986 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
RTTN-204ENST00000579986 CHIC2Q9UKJ5 165 aa9.49□□□□□ -0.89
RTTN-204ENST00000579986 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
RTTN-204ENST00000579986 LMTK2Q8IWU2 1503 aa9.47□□□□□ -0.89
RTTN-204ENST00000579986 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
RTTN-204ENST00000579986 FAM135AQ9P2D6 1515 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms