RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, humanhuman

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-211ENST00000579796 TRAK2O60296 914 aa13.62□□□□□ -0.23
ARHGAP28-211ENST00000579796 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
ARHGAP28-211ENST00000579796 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
ARHGAP28-211ENST00000579796 RAD21O60216 631 aa13.58□□□□□ -0.24
ARHGAP28-211ENST00000579796 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
ARHGAP28-211ENST00000579796 IGSF3O75054 1194 aa13.58□□□□□ -0.24
ARHGAP28-211ENST00000579796 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
ARHGAP28-211ENST00000579796 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
ARHGAP28-211ENST00000579796 A6NJR5 290 aa13.56□□□□□ -0.24
ARHGAP28-211ENST00000579796 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
ARHGAP28-211ENST00000579796 TRAIPQ9BWF2 469 aa13.55□□□□□ -0.24
ARHGAP28-211ENST00000579796 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
ARHGAP28-211ENST00000579796 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
ARHGAP28-211ENST00000579796 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.24
ARHGAP28-211ENST00000579796 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.24
ARHGAP28-211ENST00000579796 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
ARHGAP28-211ENST00000579796 MFSD10Q14728 455 aa13.51□□□□□ -0.25
ARHGAP28-211ENST00000579796 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
ARHGAP28-211ENST00000579796 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
ARHGAP28-211ENST00000579796 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
ARHGAP28-211ENST00000579796 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
ARHGAP28-211ENST00000579796 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
ARHGAP28-211ENST00000579796 ZNF777Q9ULD5 760 aaPredicted RBP13.47□□□□□ -0.25
ARHGAP28-211ENST00000579796 GPR37O15354 613 aa13.47□□□□□ -0.25
ARHGAP28-211ENST00000579796 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
ARHGAP28-211ENST00000579796 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
ARHGAP28-211ENST00000579796 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 PSEN1P49768 467 aa13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 EFCAB3Q8N7B9 438 aa13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
ARHGAP28-211ENST00000579796 PDE4AP27815 886 aa13.42□□□□□ -0.26
ARHGAP28-211ENST00000579796 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
ARHGAP28-211ENST00000579796 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
ARHGAP28-211ENST00000579796 NLRP6P59044 892 aa13.39□□□□□ -0.27
ARHGAP28-211ENST00000579796 MCM6Q14566 821 aa13.39□□□□□ -0.27
ARHGAP28-211ENST00000579796 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
ARHGAP28-211ENST00000579796 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
ARHGAP28-211ENST00000579796 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 RETREG2Q8NC44 543 aa13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 IRF5Q13568 498 aa13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 POM121Q96HA1 1249 aa13.36□□□□□ -0.27
ARHGAP28-211ENST00000579796 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
ARHGAP28-211ENST00000579796 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
ARHGAP28-211ENST00000579796 AMHR2Q16671 573 aa13.34□□□□□ -0.27
ARHGAP28-211ENST00000579796 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
ARHGAP28-211ENST00000579796 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
ARHGAP28-211ENST00000579796 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
ARHGAP28-211ENST00000579796 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
ARHGAP28-211ENST00000579796 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
ARHGAP28-211ENST00000579796 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
ARHGAP28-211ENST00000579796 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
ARHGAP28-211ENST00000579796 IRF6O14896 467 aa13.29□□□□□ -0.28
ARHGAP28-211ENST00000579796 SOX12O15370 315 aa13.29□□□□□ -0.28
ARHGAP28-211ENST00000579796 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
ARHGAP28-211ENST00000579796 CCDC97Q96F63 343 aaPredicted RBP13.28□□□□□ -0.28
ARHGAP28-211ENST00000579796 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
ARHGAP28-211ENST00000579796 MAP2K5Q13163 448 aa13.27□□□□□ -0.28
ARHGAP28-211ENST00000579796 DPYSL4O14531 572 aa13.26□□□□□ -0.29
ARHGAP28-211ENST00000579796 MS4A1P11836 297 aa13.24□□□□□ -0.29
ARHGAP28-211ENST00000579796 FECHP22830 423 aa13.23□□□□□ -0.29
ARHGAP28-211ENST00000579796 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
ARHGAP28-211ENST00000579796 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
ARHGAP28-211ENST00000579796 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
ARHGAP28-211ENST00000579796 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
ARHGAP28-211ENST00000579796 PDIA6Q15084 440 aa13.2□□□□□ -0.3
ARHGAP28-211ENST00000579796 WIZO95785 1651 aa13.19□□□□□ -0.3
ARHGAP28-211ENST00000579796 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
ARHGAP28-211ENST00000579796 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
ARHGAP28-211ENST00000579796 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
ARHGAP28-211ENST00000579796 ATAD2BQ9ULI0 1458 aa13.18□□□□□ -0.3
ARHGAP28-211ENST00000579796 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
ARHGAP28-211ENST00000579796 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
ARHGAP28-211ENST00000579796 RSF1Q96T23 1441 aaPredicted RBP13.16□□□□□ -0.3
ARHGAP28-211ENST00000579796 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
ARHGAP28-211ENST00000579796 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
ARHGAP28-211ENST00000579796 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
ARHGAP28-211ENST00000579796 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
ARHGAP28-211ENST00000579796 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
ARHGAP28-211ENST00000579796 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
ARHGAP28-211ENST00000579796 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
ARHGAP28-211ENST00000579796 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
ARHGAP28-211ENST00000579796 GNPATO15228 680 aa13.12□□□□□ -0.31
ARHGAP28-211ENST00000579796 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
ARHGAP28-211ENST00000579796 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
ARHGAP28-211ENST00000579796 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
ARHGAP28-211ENST00000579796 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
ARHGAP28-211ENST00000579796 SPDYE16A6NNV3 312 aaPredicted RBP13.1□□□□□ -0.31
ARHGAP28-211ENST00000579796 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
ARHGAP28-211ENST00000579796 E9PSI1 815 aa13.09□□□□□ -0.31
ARHGAP28-211ENST00000579796 HMGXB3Q12766 1538 aa13.08□□□□□ -0.32
ARHGAP28-211ENST00000579796 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
ARHGAP28-211ENST00000579796 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
ARHGAP28-211ENST00000579796 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms