RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
DDX42-210ENST00000579539 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
DDX42-210ENST00000579539 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
DDX42-210ENST00000579539 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
DDX42-210ENST00000579539 POTEMA6NI47 508 aa10.37□□□□□ -0.75
DDX42-210ENST00000579539 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
DDX42-210ENST00000579539 SNPHO15079 494 aa10.36□□□□□ -0.75
DDX42-210ENST00000579539 ST18O60284 1047 aa10.36□□□□□ -0.75
DDX42-210ENST00000579539 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
DDX42-210ENST00000579539 TMEM92Q6UXU6 159 aa10.36□□□□□ -0.75
DDX42-210ENST00000579539 PPP1R37O75864 691 aa10.34□□□□□ -0.75
DDX42-210ENST00000579539 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
DDX42-210ENST00000579539 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
DDX42-210ENST00000579539 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
DDX42-210ENST00000579539 NBR1Q14596 966 aa10.26□□□□□ -0.77
DDX42-210ENST00000579539 KIF3CO14782 793 aa10.24□□□□□ -0.77
DDX42-210ENST00000579539 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
DDX42-210ENST00000579539 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
DDX42-210ENST00000579539 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
DDX42-210ENST00000579539 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
DDX42-210ENST00000579539 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
DDX42-210ENST00000579539 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
DDX42-210ENST00000579539 ZNF710Q8N1W2 664 aa10.18□□□□□ -0.78
DDX42-210ENST00000579539 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
DDX42-210ENST00000579539 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
DDX42-210ENST00000579539 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
DDX42-210ENST00000579539 RIMBP2O15034 1052 aa10.14□□□□□ -0.79
DDX42-210ENST00000579539 EMP3P54852 163 aa10.14□□□□□ -0.79
DDX42-210ENST00000579539 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
DDX42-210ENST00000579539 GTF3C3Q9Y5Q9 886 aa10.14□□□□□ -0.79
DDX42-210ENST00000579539 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
DDX42-210ENST00000579539 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
DDX42-210ENST00000579539 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
DDX42-210ENST00000579539 ZSWIM6Q9HCJ5 1215 aa10.13□□□□□ -0.79
DDX42-210ENST00000579539 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
DDX42-210ENST00000579539 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
DDX42-210ENST00000579539 ARSIQ5FYB1 569 aa10.09□□□□□ -0.79
DDX42-210ENST00000579539 FOXK1P85037 733 aa10.08□□□□□ -0.8
DDX42-210ENST00000579539 HS3ST6Q96QI5 342 aa10.08□□□□□ -0.8
DDX42-210ENST00000579539 SLC34A2O95436 690 aa10.07□□□□□ -0.8
DDX42-210ENST00000579539 DSG2Q14126 1118 aa10.06□□□□□ -0.8
DDX42-210ENST00000579539 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX42-210ENST00000579539 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
DDX42-210ENST00000579539 PLPP6Q8IY26 295 aa10.05□□□□□ -0.8
DDX42-210ENST00000579539 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
DDX42-210ENST00000579539 ARXQ96QS3 562 aa10.04□□□□□ -0.8
DDX42-210ENST00000579539 ERBB3P21860 1342 aa10.04□□□□□ -0.8
DDX42-210ENST00000579539 PLSCR2Q9NRY7 297 aa10.03□□□□□ -0.8
DDX42-210ENST00000579539 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
DDX42-210ENST00000579539 PDE4AP27815 886 aa10□□□□□ -0.81
DDX42-210ENST00000579539 VARS2Q5ST30 1063 aaKnown RBP10□□□□□ -0.81
DDX42-210ENST00000579539 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
DDX42-210ENST00000579539 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
DDX42-210ENST00000579539 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
DDX42-210ENST00000579539 NUDT7P0C024 238 aa9.98□□□□□ -0.81
DDX42-210ENST00000579539 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
DDX42-210ENST00000579539 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
DDX42-210ENST00000579539 DAXXQ9UER7 740 aaPredicted RBP9.98□□□□□ -0.81
DDX42-210ENST00000579539 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
DDX42-210ENST00000579539 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
DDX42-210ENST00000579539 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
DDX42-210ENST00000579539 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
DDX42-210ENST00000579539 ERICH6Q7L0X2 663 aa9.96□□□□□ -0.82
DDX42-210ENST00000579539 MFSD10Q14728 455 aa9.94□□□□□ -0.82
DDX42-210ENST00000579539 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
DDX42-210ENST00000579539 MYT1Q01538 1121 aa9.93□□□□□ -0.82
DDX42-210ENST00000579539 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
DDX42-210ENST00000579539 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
DDX42-210ENST00000579539 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
DDX42-210ENST00000579539 TBC1D12O60347 775 aa9.9□□□□□ -0.82
DDX42-210ENST00000579539 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
DDX42-210ENST00000579539 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDX42-210ENST00000579539 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
DDX42-210ENST00000579539 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
DDX42-210ENST00000579539 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
DDX42-210ENST00000579539 HOMEZQ8IX15 550 aa9.83□□□□□ -0.84
DDX42-210ENST00000579539 MMRN1Q13201 1228 aa9.82□□□□□ -0.84
DDX42-210ENST00000579539 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
DDX42-210ENST00000579539 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
DDX42-210ENST00000579539 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
DDX42-210ENST00000579539 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
DDX42-210ENST00000579539 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
DDX42-210ENST00000579539 EVI5O60447 810 aa9.79□□□□□ -0.84
DDX42-210ENST00000579539 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
DDX42-210ENST00000579539 PBX2P40425 430 aa9.78□□□□□ -0.84
DDX42-210ENST00000579539 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
DDX42-210ENST00000579539 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
DDX42-210ENST00000579539 LSM11P83369 360 aaKnown RBP eCLIP9.76□□□□□ -0.853e-7■□□□□ 9.3
DDX42-210ENST00000579539 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
DDX42-210ENST00000579539 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
DDX42-210ENST00000579539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDX42-210ENST00000579539 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
DDX42-210ENST00000579539 BRPF1P55201 1214 aaPredicted RBP9.75□□□□□ -0.85
DDX42-210ENST00000579539 FOSBP53539 338 aa9.74□□□□□ -0.85
DDX42-210ENST00000579539 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
DDX42-210ENST00000579539 DPYSL4O14531 572 aa9.72□□□□□ -0.85
DDX42-210ENST00000579539 PSEN2P49810 448 aa9.72□□□□□ -0.85
DDX42-210ENST00000579539 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
DDX42-210ENST00000579539 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
DDX42-210ENST00000579539 E2F4Q16254 413 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms