RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
CTC1-206ENST00000579066 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
CTC1-206ENST00000579066 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
CTC1-206ENST00000579066 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
CTC1-206ENST00000579066 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
CTC1-206ENST00000579066 CLIP1P30622 1438 aa18.39■□□□□ 0.53
CTC1-206ENST00000579066 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
CTC1-206ENST00000579066 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.53
CTC1-206ENST00000579066 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
CTC1-206ENST00000579066 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
CTC1-206ENST00000579066 MLECQ14165 292 aa18.36■□□□□ 0.53
CTC1-206ENST00000579066 CDC42BPBQ9Y5S2 1711 aa18.36■□□□□ 0.53
CTC1-206ENST00000579066 CCDC18Q5T9S5 1454 aa18.34■□□□□ 0.53
CTC1-206ENST00000579066 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.53
CTC1-206ENST00000579066 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
CTC1-206ENST00000579066 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
CTC1-206ENST00000579066 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
CTC1-206ENST00000579066 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
CTC1-206ENST00000579066 CDC42BPAQ5VT25 1732 aa18.29■□□□□ 0.52
CTC1-206ENST00000579066 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
CTC1-206ENST00000579066 ATP10AO60312 1499 aa18.28■□□□□ 0.52
CTC1-206ENST00000579066 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
CTC1-206ENST00000579066 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CTC1-206ENST00000579066 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
CTC1-206ENST00000579066 KDM5CP41229 1560 aa18.27■□□□□ 0.52
CTC1-206ENST00000579066 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
CTC1-206ENST00000579066 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.52
CTC1-206ENST00000579066 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
CTC1-206ENST00000579066 ABCC1P33527 1531 aa18.26■□□□□ 0.51
CTC1-206ENST00000579066 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
CTC1-206ENST00000579066 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
CTC1-206ENST00000579066 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
CTC1-206ENST00000579066 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
CTC1-206ENST00000579066 HSPA2P54652 639 aa18.22■□□□□ 0.51
CTC1-206ENST00000579066 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CTC1-206ENST00000579066 CEBPAP49715 358 aaPredicted RBP18.2■□□□□ 0.5
CTC1-206ENST00000579066 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
CTC1-206ENST00000579066 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
CTC1-206ENST00000579066 KIDINS220Q9ULH0 1771 aa18.18■□□□□ 0.5
CTC1-206ENST00000579066 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
CTC1-206ENST00000579066 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
CTC1-206ENST00000579066 HNRNPMP52272 730 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTC1-206ENST00000579066 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
CTC1-206ENST00000579066 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
CTC1-206ENST00000579066 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
CTC1-206ENST00000579066 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
CTC1-206ENST00000579066 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
CTC1-206ENST00000579066 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
CTC1-206ENST00000579066 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
CTC1-206ENST00000579066 AGLP35573 1532 aa18.09■□□□□ 0.49
CTC1-206ENST00000579066 EHBP1L1Q8N3D4 1523 aa18.09■□□□□ 0.49
CTC1-206ENST00000579066 C3P01024 1663 aa18.09■□□□□ 0.49
CTC1-206ENST00000579066 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
CTC1-206ENST00000579066 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.49
CTC1-206ENST00000579066 SUPT6HQ7KZ85 1726 aaKnown RBP18.08■□□□□ 0.48
CTC1-206ENST00000579066 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
CTC1-206ENST00000579066 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
CTC1-206ENST00000579066 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
CTC1-206ENST00000579066 PLEKHH2Q8IVE3 1493 aa18.03■□□□□ 0.48
CTC1-206ENST00000579066 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
CTC1-206ENST00000579066 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
CTC1-206ENST00000579066 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
CTC1-206ENST00000579066 A2MP01023 1474 aa18■□□□□ 0.47
CTC1-206ENST00000579066 MBD5Q9P267 1494 aa18■□□□□ 0.47
CTC1-206ENST00000579066 PLXNC1O60486 1568 aa18■□□□□ 0.47
CTC1-206ENST00000579066 FBXO41Q8TF61 875 aa17.99■□□□□ 0.47
CTC1-206ENST00000579066 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
CTC1-206ENST00000579066 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
CTC1-206ENST00000579066 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
CTC1-206ENST00000579066 GGT6Q6P531 493 aa17.96■□□□□ 0.47
CTC1-206ENST00000579066 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
CTC1-206ENST00000579066 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
CTC1-206ENST00000579066 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
CTC1-206ENST00000579066 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
CTC1-206ENST00000579066 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
CTC1-206ENST00000579066 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
CTC1-206ENST00000579066 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
CTC1-206ENST00000579066 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
CTC1-206ENST00000579066 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
CTC1-206ENST00000579066 CERKQ8TCT0 537 aa17.89■□□□□ 0.45
CTC1-206ENST00000579066 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
CTC1-206ENST00000579066 DHX29Q7Z478 1369 aaKnown RBP17.86■□□□□ 0.45
CTC1-206ENST00000579066 NPATQ14207 1427 aa17.86■□□□□ 0.45
CTC1-206ENST00000579066 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
CTC1-206ENST00000579066 KIF3BO15066 747 aa17.85■□□□□ 0.45
CTC1-206ENST00000579066 PTPRKQ15262 1439 aa17.85■□□□□ 0.45
CTC1-206ENST00000579066 CAMSAP1Q5T5Y3 1602 aa17.85■□□□□ 0.45
CTC1-206ENST00000579066 ARHGEF5Q12774 1597 aa17.84■□□□□ 0.45
CTC1-206ENST00000579066 NCOA1Q15788 1441 aa17.83■□□□□ 0.45
CTC1-206ENST00000579066 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
CTC1-206ENST00000579066 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
CTC1-206ENST00000579066 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
CTC1-206ENST00000579066 PTPRTO14522 1441 aa17.81■□□□□ 0.44
CTC1-206ENST00000579066 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
CTC1-206ENST00000579066 CEP170BQ9Y4F5 1589 aaPredicted RBP17.8■□□□□ 0.44
CTC1-206ENST00000579066 TSPY4P0CV99 314 aa17.79■□□□□ 0.44
CTC1-206ENST00000579066 TSPY10P0CW01 314 aa17.79■□□□□ 0.44
CTC1-206ENST00000579066 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
CTC1-206ENST00000579066 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
CTC1-206ENST00000579066 MYOM3Q5VTT5 1437 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms