RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
SSH2-208ENST00000579040 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
SSH2-208ENST00000579040 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
SSH2-208ENST00000579040 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
SSH2-208ENST00000579040 HECW2Q9P2P5 1572 aa18.73■□□□□ 0.59
SSH2-208ENST00000579040 CDC42BPBQ9Y5S2 1711 aa18.73■□□□□ 0.59
SSH2-208ENST00000579040 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
SSH2-208ENST00000579040 PREX2Q70Z35 1606 aa18.72■□□□□ 0.59
SSH2-208ENST00000579040 MADDQ8WXG6 1647 aa18.71■□□□□ 0.58
SSH2-208ENST00000579040 PTPRMP28827 1452 aa18.7■□□□□ 0.58
SSH2-208ENST00000579040 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
SSH2-208ENST00000579040 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
SSH2-208ENST00000579040 ZNF518AQ6AHZ1 1483 aa18.69■□□□□ 0.58
SSH2-208ENST00000579040 KDM5CP41229 1560 aa18.68■□□□□ 0.58
SSH2-208ENST00000579040 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
SSH2-208ENST00000579040 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
SSH2-208ENST00000579040 RIMS1Q86UR5 1692 aaKnown RBP18.65■□□□□ 0.58
SSH2-208ENST00000579040 ATP10AO60312 1499 aa18.64■□□□□ 0.57
SSH2-208ENST00000579040 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
SSH2-208ENST00000579040 ABCC1P33527 1531 aa18.63■□□□□ 0.57
SSH2-208ENST00000579040 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
SSH2-208ENST00000579040 FER1L4A9Z1Z3 1794 aa18.6■□□□□ 0.57
SSH2-208ENST00000579040 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
SSH2-208ENST00000579040 REREQ9P2R6 1566 aa18.58■□□□□ 0.56
SSH2-208ENST00000579040 DIP2CQ9Y2E4 1556 aa18.58■□□□□ 0.56
SSH2-208ENST00000579040 MLH3Q9UHC1 1453 aa18.58■□□□□ 0.56
SSH2-208ENST00000579040 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
SSH2-208ENST00000579040 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
SSH2-208ENST00000579040 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
SSH2-208ENST00000579040 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
SSH2-208ENST00000579040 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
SSH2-208ENST00000579040 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
SSH2-208ENST00000579040 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
SSH2-208ENST00000579040 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
SSH2-208ENST00000579040 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
SSH2-208ENST00000579040 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.55
SSH2-208ENST00000579040 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
SSH2-208ENST00000579040 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
SSH2-208ENST00000579040 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
SSH2-208ENST00000579040 AGLP35573 1532 aa18.5■□□□□ 0.55
SSH2-208ENST00000579040 MLECQ14165 292 aa18.5■□□□□ 0.55
SSH2-208ENST00000579040 LMTK3Q96Q04 1460 aa18.5■□□□□ 0.55
SSH2-208ENST00000579040 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
SSH2-208ENST00000579040 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
SSH2-208ENST00000579040 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
SSH2-208ENST00000579040 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
SSH2-208ENST00000579040 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
SSH2-208ENST00000579040 INO80Q9ULG1 1556 aaPredicted RBP18.44■□□□□ 0.54
SSH2-208ENST00000579040 SETD1BQ9UPS6 1966 aaKnown RBP18.44■□□□□ 0.54
SSH2-208ENST00000579040 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
SSH2-208ENST00000579040 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
SSH2-208ENST00000579040 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
SSH2-208ENST00000579040 VPS8Q8N3P4 1428 aa18.42■□□□□ 0.54
SSH2-208ENST00000579040 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
SSH2-208ENST00000579040 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
SSH2-208ENST00000579040 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
SSH2-208ENST00000579040 C3P01024 1663 aa18.38■□□□□ 0.53
SSH2-208ENST00000579040 ADGBQ8N7X0 1667 aa18.38■□□□□ 0.53
SSH2-208ENST00000579040 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
SSH2-208ENST00000579040 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
SSH2-208ENST00000579040 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
SSH2-208ENST00000579040 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
SSH2-208ENST00000579040 MAP3K1Q13233 1512 aa18.36■□□□□ 0.53
SSH2-208ENST00000579040 MBD5Q9P267 1494 aa18.36■□□□□ 0.53
SSH2-208ENST00000579040 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
SSH2-208ENST00000579040 A2MP01023 1474 aa18.34■□□□□ 0.53
SSH2-208ENST00000579040 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
SSH2-208ENST00000579040 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
SSH2-208ENST00000579040 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
SSH2-208ENST00000579040 HSPA2P54652 639 aa18.33■□□□□ 0.52
SSH2-208ENST00000579040 ILDR1Q86SU0 546 aaPredicted RBP18.33■□□□□ 0.52
SSH2-208ENST00000579040 CAMSAP2Q08AD1 1489 aa18.33■□□□□ 0.52
SSH2-208ENST00000579040 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
SSH2-208ENST00000579040 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
SSH2-208ENST00000579040 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
SSH2-208ENST00000579040 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
SSH2-208ENST00000579040 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
SSH2-208ENST00000579040 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
SSH2-208ENST00000579040 NPATQ14207 1427 aa18.26■□□□□ 0.51
SSH2-208ENST00000579040 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
SSH2-208ENST00000579040 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
SSH2-208ENST00000579040 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
SSH2-208ENST00000579040 DHX29Q7Z478 1369 aaKnown RBP18.23■□□□□ 0.51
SSH2-208ENST00000579040 FAM135AQ9P2D6 1515 aa18.22■□□□□ 0.51
SSH2-208ENST00000579040 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
SSH2-208ENST00000579040 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
SSH2-208ENST00000579040 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
SSH2-208ENST00000579040 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
SSH2-208ENST00000579040 GGT6Q6P531 493 aa18.2■□□□□ 0.5
SSH2-208ENST00000579040 FBXO41Q8TF61 875 aa18.19■□□□□ 0.5
SSH2-208ENST00000579040 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
SSH2-208ENST00000579040 ZNF142P52746 1687 aaPredicted RBP18.18■□□□□ 0.5
SSH2-208ENST00000579040 MYO3AQ8NEV4 1616 aa18.17■□□□□ 0.5
SSH2-208ENST00000579040 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
SSH2-208ENST00000579040 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
SSH2-208ENST00000579040 PTPRKQ15262 1439 aa18.16■□□□□ 0.5
SSH2-208ENST00000579040 APLP2Q06481 763 aa18.16■□□□□ 0.5
SSH2-208ENST00000579040 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.49
SSH2-208ENST00000579040 KIF3BO15066 747 aa18.14■□□□□ 0.49
SSH2-208ENST00000579040 PTPRTO14522 1441 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms