RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 TRIM35Q9UPQ4 493 aa7.17□□□□□ -1.26
GAPLINC-201ENST00000578664 PHF8Q9UPP1 1060 aa7.16□□□□□ -1.26
GAPLINC-201ENST00000578664 NLRP6P59044 892 aa7.15□□□□□ -1.26
GAPLINC-201ENST00000578664 MS4A4AQ96JQ5 239 aa7.15□□□□□ -1.26
GAPLINC-201ENST00000578664 POTEIP0CG38 1075 aa7.14□□□□□ -1.27
GAPLINC-201ENST00000578664 PDIA4P13667 645 aaKnown RBP7.14□□□□□ -1.27
GAPLINC-201ENST00000578664 MKRN3Q13064 507 aaKnown RBP7.14□□□□□ -1.27
GAPLINC-201ENST00000578664 GOLGA2Q08379 1002 aa7.13□□□□□ -1.27
GAPLINC-201ENST00000578664 IER5LQ5T953 404 aa7.13□□□□□ -1.27
GAPLINC-201ENST00000578664 SLC24A3Q9HC58 644 aa7.13□□□□□ -1.27
GAPLINC-201ENST00000578664 PPP1R37O75864 691 aa7.12□□□□□ -1.27
GAPLINC-201ENST00000578664 DCBLD2Q96PD2 775 aa7.12□□□□□ -1.27
GAPLINC-201ENST00000578664 IRX5P78411 483 aaPredicted RBP7.11□□□□□ -1.27
GAPLINC-201ENST00000578664 WDR70Q9NW82 654 aa7.11□□□□□ -1.27
GAPLINC-201ENST00000578664 KCNV2Q8TDN2 545 aa7.1□□□□□ -1.27
GAPLINC-201ENST00000578664 PDCD7Q8N8D1 485 aaKnown RBP7.09□□□□□ -1.27
GAPLINC-201ENST00000578664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.09□□□□□ -1.27
GAPLINC-201ENST00000578664 ARID3AQ99856 593 aa7.07□□□□□ -1.28
GAPLINC-201ENST00000578664 C1orf115Q9H7X2 142 aa7.07□□□□□ -1.28
GAPLINC-201ENST00000578664 SHROOM4Q9ULL8 1493 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 POTEFA5A3E0 1075 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 ZMYND10O75800 440 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 CADPS2Q86UW7 1296 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 SLC39A7Q92504 469 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
GAPLINC-201ENST00000578664 C7P10643 843 aa7.05□□□□□ -1.28
GAPLINC-201ENST00000578664 DPY19L2Q6NUT2 758 aa7.05□□□□□ -1.28
GAPLINC-201ENST00000578664 COLQQ9Y215 455 aaPredicted RBP7.05□□□□□ -1.28
GAPLINC-201ENST00000578664 LOC105371045A0A1W2PR82 267 aa7.03□□□□□ -1.28
GAPLINC-201ENST00000578664 NECTIN2Q92692 538 aa7.03□□□□□ -1.28
GAPLINC-201ENST00000578664 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
GAPLINC-201ENST00000578664 PLCG2P16885 1265 aa7.02□□□□□ -1.29
GAPLINC-201ENST00000578664 METRNQ9UJH8 293 aa7.02□□□□□ -1.29
GAPLINC-201ENST00000578664 APBB1O00213 710 aa7.01□□□□□ -1.29
GAPLINC-201ENST00000578664 TESPA1A2RU30 521 aaPredicted RBP7□□□□□ -1.29
GAPLINC-201ENST00000578664 BARGINQ6ZT62 677 aa7□□□□□ -1.29
GAPLINC-201ENST00000578664 SEC24BO95487 1268 aa6.99□□□□□ -1.29
GAPLINC-201ENST00000578664 MICALL2Q8IY33 904 aa6.99□□□□□ -1.29
GAPLINC-201ENST00000578664 NCKAP5LQ9HCH0 1330 aa6.99□□□□□ -1.29
GAPLINC-201ENST00000578664 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
GAPLINC-201ENST00000578664 AK7Q96M32 723 aa6.98□□□□□ -1.29
GAPLINC-201ENST00000578664 BOLA1Q9Y3E2 137 aa6.98□□□□□ -1.29
GAPLINC-201ENST00000578664 KCTD17Q8N5Z5 321 aa6.97□□□□□ -1.29
GAPLINC-201ENST00000578664 CRISPLD2Q9H0B8 497 aa6.97□□□□□ -1.29
GAPLINC-201ENST00000578664 SMYD5Q6GMV2 418 aa6.96□□□□□ -1.3
GAPLINC-201ENST00000578664 L3MBTL3Q96JM7 780 aaPredicted RBP6.96□□□□□ -1.3
GAPLINC-201ENST00000578664 TRAIPQ9BWF2 469 aa6.96□□□□□ -1.3
GAPLINC-201ENST00000578664 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
GAPLINC-201ENST00000578664 FLIIQ13045 1269 aa6.95□□□□□ -1.3
GAPLINC-201ENST00000578664 MFSD10Q14728 455 aa6.95□□□□□ -1.3
GAPLINC-201ENST00000578664 HMGB1P09429 215 aaKnown RBP6.94□□□□□ -1.3
GAPLINC-201ENST00000578664 KIF3CO14782 793 aa6.93□□□□□ -1.3
GAPLINC-201ENST00000578664 PDE4AP27815 886 aa6.93□□□□□ -1.3
GAPLINC-201ENST00000578664 GPHNQ9NQX3 736 aaPredicted RBP6.93□□□□□ -1.3
GAPLINC-201ENST00000578664 SEMA3EO15041 775 aa6.92□□□□□ -1.3
GAPLINC-201ENST00000578664 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
GAPLINC-201ENST00000578664 KDM4CQ9H3R0 1056 aa6.92□□□□□ -1.3
GAPLINC-201ENST00000578664 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
GAPLINC-201ENST00000578664 A6NJR5 290 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 POTEB2H3BUK9 544 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 RAD21O60216 631 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 POTEJP0CG39 1038 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 E2F4Q16254 413 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
GAPLINC-201ENST00000578664 LARP6Q9BRS8 491 aaKnown RBP6.9□□□□□ -1.3
GAPLINC-201ENST00000578664 G3V3G9 751 aa6.89□□□□□ -1.31
GAPLINC-201ENST00000578664 C2orf72A6NCS6 295 aa6.88□□□□□ -1.31
GAPLINC-201ENST00000578664 FOXK1P85037 733 aa6.88□□□□□ -1.31
GAPLINC-201ENST00000578664 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
GAPLINC-201ENST00000578664 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
GAPLINC-201ENST00000578664 TRAK2O60296 914 aa6.87□□□□□ -1.31
GAPLINC-201ENST00000578664 IGSF3O75054 1194 aa6.87□□□□□ -1.31
GAPLINC-201ENST00000578664 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
GAPLINC-201ENST00000578664 DSG2Q14126 1118 aa6.86□□□□□ -1.31
GAPLINC-201ENST00000578664 PPP1R15BQ5SWA1 713 aa6.86□□□□□ -1.31
GAPLINC-201ENST00000578664 KRI1Q8N9T8 703 aaKnown RBP6.86□□□□□ -1.31
GAPLINC-201ENST00000578664 TMC2Q8TDI7 906 aa6.86□□□□□ -1.31
GAPLINC-201ENST00000578664 C3orf67Q6ZVT6 689 aa6.85□□□□□ -1.31
GAPLINC-201ENST00000578664 ARIH1Q9Y4X5 557 aaPredicted RBP6.85□□□□□ -1.31
GAPLINC-201ENST00000578664 TRIM66O15016 1216 aa6.84□□□□□ -1.31
GAPLINC-201ENST00000578664 PDE4DQ08499 809 aa6.84□□□□□ -1.31
GAPLINC-201ENST00000578664 HSP90B1P14625 803 aaKnown RBP6.83□□□□□ -1.32
GAPLINC-201ENST00000578664 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
GAPLINC-201ENST00000578664 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.83□□□□□ -1.32
GAPLINC-201ENST00000578664 PLPP6Q8IY26 295 aa6.82□□□□□ -1.32
GAPLINC-201ENST00000578664 MTMR7Q9Y216 660 aa6.82□□□□□ -1.32
GAPLINC-201ENST00000578664 ZNF316A6NFI3 1004 aaPredicted RBP6.81□□□□□ -1.32
GAPLINC-201ENST00000578664 ONECUT3O60422 494 aaPredicted RBP6.81□□□□□ -1.32
GAPLINC-201ENST00000578664 EIF5BO60841 1220 aaKnown RBP6.81□□□□□ -1.32
GAPLINC-201ENST00000578664 EMILIN3Q9NT22 766 aa6.81□□□□□ -1.32
GAPLINC-201ENST00000578664 MAMSTRQ6ZN01 415 aa6.8□□□□□ -1.32
GAPLINC-201ENST00000578664 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
GAPLINC-201ENST00000578664 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
GAPLINC-201ENST00000578664 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
GAPLINC-201ENST00000578664 GOPCQ9HD26 462 aa6.8□□□□□ -1.32
GAPLINC-201ENST00000578664 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
GAPLINC-201ENST00000578664 FAM117AQ9C073 453 aa6.79□□□□□ -1.32
GAPLINC-201ENST00000578664 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
GAPLINC-201ENST00000578664 E9PSI1 815 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms