RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
GGA3-204ENST00000578208 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
GGA3-204ENST00000578208 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
GGA3-204ENST00000578208 POGZQ7Z3K3 1410 aa18.41■□□□□ 0.54
GGA3-204ENST00000578208 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
GGA3-204ENST00000578208 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
GGA3-204ENST00000578208 ARHGEF40Q8TER5 1519 aa18.4■□□□□ 0.54
GGA3-204ENST00000578208 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
GGA3-204ENST00000578208 KDM4FA0A1W2PPD8 638 aa18.39■□□□□ 0.53
GGA3-204ENST00000578208 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.53
GGA3-204ENST00000578208 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
GGA3-204ENST00000578208 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
GGA3-204ENST00000578208 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
GGA3-204ENST00000578208 MAGI2Q86UL8 1455 aa18.37■□□□□ 0.53
GGA3-204ENST00000578208 ABCC1P33527 1531 aa18.35■□□□□ 0.53
GGA3-204ENST00000578208 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
GGA3-204ENST00000578208 ZNF777Q9ULD5 760 aaPredicted RBP18.34■□□□□ 0.53
GGA3-204ENST00000578208 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
GGA3-204ENST00000578208 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
GGA3-204ENST00000578208 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.53
GGA3-204ENST00000578208 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.52
GGA3-204ENST00000578208 APLP2Q06481 763 aa18.32■□□□□ 0.52
GGA3-204ENST00000578208 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
GGA3-204ENST00000578208 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
GGA3-204ENST00000578208 PLEKHH2Q8IVE3 1493 aa18.31■□□□□ 0.52
GGA3-204ENST00000578208 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
GGA3-204ENST00000578208 KDM5CP41229 1560 aa18.3■□□□□ 0.52
GGA3-204ENST00000578208 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
GGA3-204ENST00000578208 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
GGA3-204ENST00000578208 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
GGA3-204ENST00000578208 LRRC9Q6ZRR7 1453 aa18.29■□□□□ 0.52
GGA3-204ENST00000578208 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
GGA3-204ENST00000578208 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
GGA3-204ENST00000578208 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.51
GGA3-204ENST00000578208 ATP10AO60312 1499 aa18.26■□□□□ 0.51
GGA3-204ENST00000578208 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
GGA3-204ENST00000578208 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
GGA3-204ENST00000578208 KIAA1107Q9UPP5 1409 aa18.25■□□□□ 0.51
GGA3-204ENST00000578208 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
GGA3-204ENST00000578208 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
GGA3-204ENST00000578208 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.51
GGA3-204ENST00000578208 ADAMTSL3P82987 1691 aa18.22■□□□□ 0.51
GGA3-204ENST00000578208 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
GGA3-204ENST00000578208 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
GGA3-204ENST00000578208 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
GGA3-204ENST00000578208 SPAG9O60271 1321 aaKnown RBP18.2■□□□□ 0.5
GGA3-204ENST00000578208 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
GGA3-204ENST00000578208 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
GGA3-204ENST00000578208 MLECQ14165 292 aa18.17■□□□□ 0.5
GGA3-204ENST00000578208 CAMSAP2Q08AD1 1489 aa18.17■□□□□ 0.5
GGA3-204ENST00000578208 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
GGA3-204ENST00000578208 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
GGA3-204ENST00000578208 KIDINS220Q9ULH0 1771 aa18.17■□□□□ 0.5
GGA3-204ENST00000578208 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
GGA3-204ENST00000578208 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
GGA3-204ENST00000578208 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
GGA3-204ENST00000578208 PTPRMP28827 1452 aa18.14■□□□□ 0.5
GGA3-204ENST00000578208 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
GGA3-204ENST00000578208 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
GGA3-204ENST00000578208 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
GGA3-204ENST00000578208 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
GGA3-204ENST00000578208 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
GGA3-204ENST00000578208 RSPH4AQ5TD94 716 aa18.11■□□□□ 0.49
GGA3-204ENST00000578208 AGLP35573 1532 aa18.11■□□□□ 0.49
GGA3-204ENST00000578208 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
GGA3-204ENST00000578208 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
GGA3-204ENST00000578208 A2MP01023 1474 aa18.07■□□□□ 0.48
GGA3-204ENST00000578208 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
GGA3-204ENST00000578208 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
GGA3-204ENST00000578208 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
GGA3-204ENST00000578208 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
GGA3-204ENST00000578208 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
GGA3-204ENST00000578208 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
GGA3-204ENST00000578208 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
GGA3-204ENST00000578208 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
GGA3-204ENST00000578208 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
GGA3-204ENST00000578208 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
GGA3-204ENST00000578208 DHX29Q7Z478 1369 aaKnown RBP17.99■□□□□ 0.47
GGA3-204ENST00000578208 TCOF1Q13428 1488 aaKnown RBP17.97■□□□□ 0.47
GGA3-204ENST00000578208 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
GGA3-204ENST00000578208 GGT6Q6P531 493 aa17.95■□□□□ 0.46
GGA3-204ENST00000578208 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
GGA3-204ENST00000578208 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
GGA3-204ENST00000578208 DAPK1P53355 1430 aa17.93■□□□□ 0.46
GGA3-204ENST00000578208 CEBPAP49715 358 aaPredicted RBP17.93■□□□□ 0.46
GGA3-204ENST00000578208 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
GGA3-204ENST00000578208 C3P01024 1663 aa17.93■□□□□ 0.46
GGA3-204ENST00000578208 ABCC5O15440 1437 aa17.92■□□□□ 0.46
GGA3-204ENST00000578208 KIF3BO15066 747 aa17.92■□□□□ 0.46
GGA3-204ENST00000578208 FAM50AQ14320 339 aaKnown RBP17.92■□□□□ 0.46
GGA3-204ENST00000578208 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
GGA3-204ENST00000578208 LMTK3Q96Q04 1460 aa17.91■□□□□ 0.46
GGA3-204ENST00000578208 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
GGA3-204ENST00000578208 PREX1Q8TCU6 1659 aa17.9■□□□□ 0.46
GGA3-204ENST00000578208 DUOX2Q9NRD8 1548 aa17.89■□□□□ 0.45
GGA3-204ENST00000578208 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
GGA3-204ENST00000578208 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
GGA3-204ENST00000578208 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
GGA3-204ENST00000578208 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
GGA3-204ENST00000578208 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms