RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.11
RHOT1-206ENST00000578205 MS4A4AQ96JQ5 239 aa8.14□□□□□ -1.11
RHOT1-206ENST00000578205 CCDC180Q9P1Z9 1646 aa8.13□□□□□ -1.11
RHOT1-206ENST00000578205 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
RHOT1-206ENST00000578205 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
RHOT1-206ENST00000578205 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
RHOT1-206ENST00000578205 NLRP6P59044 892 aa8.09□□□□□ -1.11
RHOT1-206ENST00000578205 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
RHOT1-206ENST00000578205 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
RHOT1-206ENST00000578205 STK24Q9Y6E0 443 aa8.06□□□□□ -1.12
RHOT1-206ENST00000578205 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
RHOT1-206ENST00000578205 FBXO22Q8NEZ5 403 aa8.05□□□□□ -1.12
RHOT1-206ENST00000578205 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
RHOT1-206ENST00000578205 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
RHOT1-206ENST00000578205 STK25O00506 426 aa8.02□□□□□ -1.13
RHOT1-206ENST00000578205 MFRPQ9BY79 579 aa8.01□□□□□ -1.13
RHOT1-206ENST00000578205 MYT1LQ9UL68 1186 aa8□□□□□ -1.13
RHOT1-206ENST00000578205 ECM2O94769 699 aaPredicted RBP8□□□□□ -1.13
RHOT1-206ENST00000578205 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
RHOT1-206ENST00000578205 KHSRPQ92945 711 aaKnown RBP eCLIP7.99□□□□□ -1.133e-6■■■■□ 20.1
RHOT1-206ENST00000578205 C2orf72A6NCS6 295 aa7.97□□□□□ -1.13
RHOT1-206ENST00000578205 PTGER2P43116 358 aa7.96□□□□□ -1.13
RHOT1-206ENST00000578205 KIF3CO14782 793 aa7.96□□□□□ -1.14
RHOT1-206ENST00000578205 ANKRD13DQ6ZTN6 518 aa7.96□□□□□ -1.14
RHOT1-206ENST00000578205 RGL2O15211 777 aa7.93□□□□□ -1.14
RHOT1-206ENST00000578205 NUDT7P0C024 238 aa7.93□□□□□ -1.14
RHOT1-206ENST00000578205 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
RHOT1-206ENST00000578205 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
RHOT1-206ENST00000578205 PKD2Q13563 968 aa7.92□□□□□ -1.14
RHOT1-206ENST00000578205 PCDHGA4Q9Y5G9 962 aa7.9□□□□□ -1.14
RHOT1-206ENST00000578205 SLC34A2O95436 690 aa7.9□□□□□ -1.15
RHOT1-206ENST00000578205 PBX2P40425 430 aa7.89□□□□□ -1.15
RHOT1-206ENST00000578205 LHX6Q9UPM6 363 aa7.89□□□□□ -1.15
RHOT1-206ENST00000578205 PPP1R37O75864 691 aa7.86□□□□□ -1.15
RHOT1-206ENST00000578205 AXIN2Q9Y2T1 843 aa7.86□□□□□ -1.15
RHOT1-206ENST00000578205 SHROOM4Q9ULL8 1493 aa7.85□□□□□ -1.15
RHOT1-206ENST00000578205 POTEEQ6S8J3 1075 aa7.84□□□□□ -1.15
RHOT1-206ENST00000578205 RTN4Q9NQC3 1192 aaKnown RBP7.83□□□□□ -1.16
RHOT1-206ENST00000578205 ZCCHC6Q5VYS8 1495 aaKnown RBP7.82□□□□□ -1.16
RHOT1-206ENST00000578205 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
RHOT1-206ENST00000578205 ARHGAP33O14559 1287 aa7.8□□□□□ -1.16
RHOT1-206ENST00000578205 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
RHOT1-206ENST00000578205 FOXK1P85037 733 aa7.78□□□□□ -1.16
RHOT1-206ENST00000578205 ADGRD1Q6QNK2 874 aa7.78□□□□□ -1.16
RHOT1-206ENST00000578205 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
RHOT1-206ENST00000578205 KDM4FA0A1W2PPD8 638 aa7.77□□□□□ -1.17
RHOT1-206ENST00000578205 HS6ST3Q8IZP7 471 aa7.77□□□□□ -1.17
RHOT1-206ENST00000578205 GPHNQ9NQX3 736 aaPredicted RBP7.77□□□□□ -1.17
RHOT1-206ENST00000578205 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
RHOT1-206ENST00000578205 TBC1D12O60347 775 aa7.74□□□□□ -1.17
RHOT1-206ENST00000578205 DSG2Q14126 1118 aa7.74□□□□□ -1.17
RHOT1-206ENST00000578205 TK2O00142 265 aa7.74□□□□□ -1.17
RHOT1-206ENST00000578205 PPP4R3BQ5MIZ7 849 aa7.74□□□□□ -1.17
RHOT1-206ENST00000578205 PSEN2P49810 448 aa7.73□□□□□ -1.17
RHOT1-206ENST00000578205 PLA2G2EQ9NZK7 142 aa7.73□□□□□ -1.17
RHOT1-206ENST00000578205 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
RHOT1-206ENST00000578205 RB1CC1Q8TDY2 1594 aa7.73□□□□□ -1.17
RHOT1-206ENST00000578205 CHGAP10645 457 aaKnown RBP7.72□□□□□ -1.17
RHOT1-206ENST00000578205 NACADO15069 1562 aa7.71□□□□□ -1.18
RHOT1-206ENST00000578205 AMER1Q5JTC6 1135 aaPredicted RBP7.71□□□□□ -1.18
RHOT1-206ENST00000578205 HRO43593 1189 aa7.71□□□□□ -1.18
RHOT1-206ENST00000578205 KCNH8Q96L42 1107 aa7.7□□□□□ -1.18
RHOT1-206ENST00000578205 STAC3Q96MF2 364 aa7.7□□□□□ -1.18
RHOT1-206ENST00000578205 SCRIBQ14160 1630 aa7.69□□□□□ -1.18
RHOT1-206ENST00000578205 KCNK17Q96T54 332 aa7.68□□□□□ -1.18
RHOT1-206ENST00000578205 KCTD12Q96CX2 325 aaKnown RBP7.67□□□□□ -1.18
RHOT1-206ENST00000578205 RYDENQ9NUL5 291 aaKnown RBP7.67□□□□□ -1.18
RHOT1-206ENST00000578205 OXER1Q8TDS5 423 aa7.66□□□□□ -1.18
RHOT1-206ENST00000578205 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
RHOT1-206ENST00000578205 NKX1-1Q15270 411 aaPredicted RBP7.65□□□□□ -1.18
RHOT1-206ENST00000578205 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.19
RHOT1-206ENST00000578205 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
RHOT1-206ENST00000578205 CRISPLD2Q9H0B8 497 aa7.64□□□□□ -1.19
RHOT1-206ENST00000578205 PPP1R15BQ5SWA1 713 aa7.63□□□□□ -1.19
RHOT1-206ENST00000578205 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
RHOT1-206ENST00000578205 DCAF1Q9Y4B6 1507 aa7.63□□□□□ -1.19
RHOT1-206ENST00000578205 BCL2L12Q9HB09 334 aa7.61□□□□□ -1.19
RHOT1-206ENST00000578205 PDE4AP27815 886 aa7.59□□□□□ -1.19
RHOT1-206ENST00000578205 FOSBP53539 338 aa7.59□□□□□ -1.19
RHOT1-206ENST00000578205 PTPN5P54829 565 aa7.59□□□□□ -1.19
RHOT1-206ENST00000578205 MYO15BQ96JP2 1530 aa7.59□□□□□ -1.19
RHOT1-206ENST00000578205 PTPREP23469 700 aa7.59□□□□□ -1.2
RHOT1-206ENST00000578205 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.2
RHOT1-206ENST00000578205 NCKAP5LQ9HCH0 1330 aa7.58□□□□□ -1.2
RHOT1-206ENST00000578205 JPH4Q96JJ6 628 aa7.56□□□□□ -1.2
RHOT1-206ENST00000578205 EVI5O60447 810 aa7.56□□□□□ -1.2
RHOT1-206ENST00000578205 ANO8Q9HCE9 1232 aaPredicted RBP7.56□□□□□ -1.2
RHOT1-206ENST00000578205 UNC13AQ9UPW8 1703 aa7.56□□□□□ -1.2
RHOT1-206ENST00000578205 GOLGA8CPA6NN73 597 aa7.55□□□□□ -1.2
RHOT1-206ENST00000578205 LARP6Q9BRS8 491 aaKnown RBP7.55□□□□□ -1.2
RHOT1-206ENST00000578205 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
RHOT1-206ENST00000578205 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
RHOT1-206ENST00000578205 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
RHOT1-206ENST00000578205 THSD4Q6ZMP0 1018 aa7.54□□□□□ -1.2
RHOT1-206ENST00000578205 MRPL50Q8N5N7 158 aaKnown RBP7.54□□□□□ -1.2
RHOT1-206ENST00000578205 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
RHOT1-206ENST00000578205 BICRAQ9NZM4 1560 aa7.53□□□□□ -1.2
RHOT1-206ENST00000578205 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
RHOT1-206ENST00000578205 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
RHOT1-206ENST00000578205 MAP3K9P80192 1104 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms