RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 TMEM106CQ9BVX2 250 aa9.04□□□□□ -0.96
KRT39-202ENST00000578029 SP7Q8TDD2 431 aaPredicted RBP9.03□□□□□ -0.96
KRT39-202ENST00000578029 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
KRT39-202ENST00000578029 GABBR2O75899 941 aa9.01□□□□□ -0.97
KRT39-202ENST00000578029 SUPT5HO00267 1087 aaKnown RBP9□□□□□ -0.97
KRT39-202ENST00000578029 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
KRT39-202ENST00000578029 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
KRT39-202ENST00000578029 CLCN6P51797 869 aa8.99□□□□□ -0.97
KRT39-202ENST00000578029 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
KRT39-202ENST00000578029 SPDYE16A6NNV3 312 aaPredicted RBP8.98□□□□□ -0.97
KRT39-202ENST00000578029 GALR2O43603 387 aaPredicted RBP8.98□□□□□ -0.97
KRT39-202ENST00000578029 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
KRT39-202ENST00000578029 GPBP1L1Q9HC44 474 aaPredicted RBP8.98□□□□□ -0.97
KRT39-202ENST00000578029 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
KRT39-202ENST00000578029 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
KRT39-202ENST00000578029 TRPC6Q9Y210 931 aa8.95□□□□□ -0.98
KRT39-202ENST00000578029 DPYSL4O14531 572 aa8.94□□□□□ -0.98
KRT39-202ENST00000578029 TRIM66O15016 1216 aa8.94□□□□□ -0.98
KRT39-202ENST00000578029 PDE4DQ08499 809 aa8.93□□□□□ -0.98
KRT39-202ENST00000578029 PDIA6Q15084 440 aa8.93□□□□□ -0.98
KRT39-202ENST00000578029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.93□□□□□ -0.98
KRT39-202ENST00000578029 TIE1P35590 1138 aa8.92□□□□□ -0.98
KRT39-202ENST00000578029 ILDR1Q86SU0 546 aaPredicted RBP8.92□□□□□ -0.98
KRT39-202ENST00000578029 EMILIN3Q9NT22 766 aa8.92□□□□□ -0.98
KRT39-202ENST00000578029 DSG2Q14126 1118 aa8.89□□□□□ -0.99
KRT39-202ENST00000578029 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
KRT39-202ENST00000578029 ZMYND15Q9H091 742 aa8.89□□□□□ -0.99
KRT39-202ENST00000578029 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
KRT39-202ENST00000578029 FOXK1P85037 733 aa8.88□□□□□ -0.99
KRT39-202ENST00000578029 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
KRT39-202ENST00000578029 MINK1Q8N4C8 1332 aaPredicted RBP8.86□□□□□ -0.99
KRT39-202ENST00000578029 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
KRT39-202ENST00000578029 MICALL2Q8IY33 904 aa8.85□□□□□ -0.99
KRT39-202ENST00000578029 BMP2KQ9NSY1 1161 aaPredicted RBP8.85□□□□□ -0.99
KRT39-202ENST00000578029 GPR37O15354 613 aa8.84□□□□□ -0.99
KRT39-202ENST00000578029 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
KRT39-202ENST00000578029 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
KRT39-202ENST00000578029 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
KRT39-202ENST00000578029 NUTM2FA1L443 756 aa8.82□□□□□ -1
KRT39-202ENST00000578029 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
KRT39-202ENST00000578029 GRXCR2A6NFK2 248 aa8.82□□□□□ -1
KRT39-202ENST00000578029 MAP3K9P80192 1104 aa8.82□□□□□ -1
KRT39-202ENST00000578029 MAP2K5Q13163 448 aa8.82□□□□□ -1
KRT39-202ENST00000578029 PLPP6Q8IY26 295 aa8.82□□□□□ -1
KRT39-202ENST00000578029 FAM117AQ9C073 453 aa8.82□□□□□ -1
KRT39-202ENST00000578029 TRIM35Q9UPQ4 493 aa8.82□□□□□ -1
KRT39-202ENST00000578029 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
KRT39-202ENST00000578029 DPY19L2Q6NUT2 758 aa8.81□□□□□ -1
KRT39-202ENST00000578029 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
KRT39-202ENST00000578029 CCDC102AQ96A19 550 aa8.8□□□□□ -1
KRT39-202ENST00000578029 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
KRT39-202ENST00000578029 IRF6O14896 467 aa8.79□□□□□ -1
KRT39-202ENST00000578029 GNPATO15228 680 aa8.79□□□□□ -1
KRT39-202ENST00000578029 AMHR2Q16671 573 aa8.79□□□□□ -1
KRT39-202ENST00000578029 G3V3G9 751 aa8.78□□□□□ -1
KRT39-202ENST00000578029 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
KRT39-202ENST00000578029 HIC1Q14526 733 aa8.77□□□□□ -1.01
KRT39-202ENST00000578029 FCHSD2O94868 740 aa8.76□□□□□ -1.01
KRT39-202ENST00000578029 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
KRT39-202ENST00000578029 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
KRT39-202ENST00000578029 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
KRT39-202ENST00000578029 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
KRT39-202ENST00000578029 KIF3CO14782 793 aa8.75□□□□□ -1.01
KRT39-202ENST00000578029 OSBPP22059 807 aa8.75□□□□□ -1.01
KRT39-202ENST00000578029 FLIIQ13045 1269 aa8.75□□□□□ -1.01
KRT39-202ENST00000578029 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
KRT39-202ENST00000578029 PTGER2P43116 358 aa8.74□□□□□ -1.01
KRT39-202ENST00000578029 TBC1D12O60347 775 aa8.73□□□□□ -1.01
KRT39-202ENST00000578029 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
KRT39-202ENST00000578029 OCEL1Q9H607 264 aa8.73□□□□□ -1.01
KRT39-202ENST00000578029 GOPCQ9HD26 462 aa8.73□□□□□ -1.01
KRT39-202ENST00000578029 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
KRT39-202ENST00000578029 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
KRT39-202ENST00000578029 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
KRT39-202ENST00000578029 IRX5P78411 483 aaPredicted RBP8.7□□□□□ -1.02
KRT39-202ENST00000578029 IER5LQ5T953 404 aa8.7□□□□□ -1.02
KRT39-202ENST00000578029 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
KRT39-202ENST00000578029 DDX12PQ92771 950 aa8.7□□□□□ -1.02
KRT39-202ENST00000578029 FECHP22830 423 aa8.68□□□□□ -1.02
KRT39-202ENST00000578029 L3MBTL3Q96JM7 780 aaPredicted RBP8.68□□□□□ -1.02
KRT39-202ENST00000578029 SLC39A7Q92504 469 aa8.67□□□□□ -1.02
KRT39-202ENST00000578029 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
KRT39-202ENST00000578029 ARID3AQ99856 593 aa8.67□□□□□ -1.02
KRT39-202ENST00000578029 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
KRT39-202ENST00000578029 EVI5O60447 810 aa8.66□□□□□ -1.02
KRT39-202ENST00000578029 C7P10643 843 aa8.66□□□□□ -1.02
KRT39-202ENST00000578029 PTGDRQ13258 359 aa8.66□□□□□ -1.02
KRT39-202ENST00000578029 PLCG2P16885 1265 aa8.65□□□□□ -1.02
KRT39-202ENST00000578029 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
KRT39-202ENST00000578029 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
KRT39-202ENST00000578029 COLQQ9Y215 455 aaPredicted RBP8.65□□□□□ -1.02
KRT39-202ENST00000578029 APBB1O00213 710 aa8.63□□□□□ -1.03
KRT39-202ENST00000578029 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
KRT39-202ENST00000578029 MS4A1P11836 297 aa8.62□□□□□ -1.03
KRT39-202ENST00000578029 A6NJR5 290 aa8.61□□□□□ -1.03
KRT39-202ENST00000578029 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
KRT39-202ENST00000578029 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
KRT39-202ENST00000578029 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
KRT39-202ENST00000578029 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
KRT39-202ENST00000578029 CLCN1P35523 988 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms