RNA–Protein interactions for RNA: ENST00000577968.1

CCDC144NL-AS1-210, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 821 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-210ENST00000577968 TMC2Q8TDI7 906 aa13.35□□□□□ -0.27
CCDC144NL-AS1-210ENST00000577968 KIF3CO14782 793 aa13.34□□□□□ -0.27
CCDC144NL-AS1-210ENST00000577968 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-AS1-210ENST00000577968 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 HOXB3P14651 431 aaPredicted RBP13.32□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 POTEMA6NI47 508 aa13.31□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
CCDC144NL-AS1-210ENST00000577968 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 FOXK1P85037 733 aa13.22□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.29
CCDC144NL-AS1-210ENST00000577968 SLC34A2O95436 690 aa13.19□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 PDE4AP27815 886 aa13.19□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 EMP3P54852 163 aa13.18□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 DSG2Q14126 1118 aa13.15□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
CCDC144NL-AS1-210ENST00000577968 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
CCDC144NL-AS1-210ENST00000577968 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 ERBB3P21860 1342 aa13.06□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 TBC1D12O60347 775 aa13.05□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 CDAN1Q8IWY9 1227 aa13.05□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
CCDC144NL-AS1-210ENST00000577968 KHSRPQ92945 711 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 NUDT7P0C024 238 aa13□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
CCDC144NL-AS1-210ENST00000577968 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
CCDC144NL-AS1-210ENST00000577968 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 KRTAP3-2Q9BYR7 98 aa12.84□□□□□ -0.35
CCDC144NL-AS1-210ENST00000577968 EVI5O60447 810 aa12.83□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 PBX2P40425 430 aa12.82□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 E2F4Q16254 413 aa12.81□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
CCDC144NL-AS1-210ENST00000577968 DPYSL4O14531 572 aa12.76□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 FOSBP53539 338 aa12.74□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 ARIH1Q9Y4X5 557 aaPredicted RBP12.74□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
CCDC144NL-AS1-210ENST00000577968 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 PDIA6Q15084 440 aa12.69□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 PHF14O94880 888 aa12.67□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 PTGER2P43116 358 aa12.67□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 ZDHHC16Q969W1 377 aa12.67□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
CCDC144NL-AS1-210ENST00000577968 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 EPAS1Q99814 870 aa12.63□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 PTPREP23469 700 aa12.62□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 PSEN2P49810 448 aa12.61□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 TK2O00142 265 aa12.6□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 ADAM33Q9BZ11 813 aa12.6□□□□□ -0.39
CCDC144NL-AS1-210ENST00000577968 KCNV2Q8TDN2 545 aa12.58□□□□□ -0.4
CCDC144NL-AS1-210ENST00000577968 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
CCDC144NL-AS1-210ENST00000577968 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
CCDC144NL-AS1-210ENST00000577968 DDX12PQ92771 950 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms