RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
SUPT6H-204ENST00000577939 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
SUPT6H-204ENST00000577939 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
SUPT6H-204ENST00000577939 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
SUPT6H-204ENST00000577939 BCORL1Q5H9F3 1711 aa16.38■□□□□ 0.21
SUPT6H-204ENST00000577939 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
SUPT6H-204ENST00000577939 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
SUPT6H-204ENST00000577939 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
SUPT6H-204ENST00000577939 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
SUPT6H-204ENST00000577939 EFCAB2Q5VUJ9 269 aa16.35■□□□□ 0.21
SUPT6H-204ENST00000577939 SCAPERQ9BY12 1400 aa16.34■□□□□ 0.21
SUPT6H-204ENST00000577939 EHBP1L1Q8N3D4 1523 aa16.34■□□□□ 0.21
SUPT6H-204ENST00000577939 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
SUPT6H-204ENST00000577939 ABCC1P33527 1531 aa16.33■□□□□ 0.2
SUPT6H-204ENST00000577939 KDM5CP41229 1560 aa16.33■□□□□ 0.2
SUPT6H-204ENST00000577939 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
SUPT6H-204ENST00000577939 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
SUPT6H-204ENST00000577939 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
SUPT6H-204ENST00000577939 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
SUPT6H-204ENST00000577939 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
SUPT6H-204ENST00000577939 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
SUPT6H-204ENST00000577939 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.19
SUPT6H-204ENST00000577939 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
SUPT6H-204ENST00000577939 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
SUPT6H-204ENST00000577939 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
SUPT6H-204ENST00000577939 SAMD9LQ8IVG5 1584 aa16.24■□□□□ 0.19
SUPT6H-204ENST00000577939 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
SUPT6H-204ENST00000577939 ATP10AO60312 1499 aa16.23■□□□□ 0.19
SUPT6H-204ENST00000577939 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
SUPT6H-204ENST00000577939 PTPRMP28827 1452 aa16.22■□□□□ 0.19
SUPT6H-204ENST00000577939 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
SUPT6H-204ENST00000577939 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
SUPT6H-204ENST00000577939 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
SUPT6H-204ENST00000577939 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
SUPT6H-204ENST00000577939 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
SUPT6H-204ENST00000577939 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
SUPT6H-204ENST00000577939 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
SUPT6H-204ENST00000577939 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
SUPT6H-204ENST00000577939 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
SUPT6H-204ENST00000577939 ARHGEF12Q9NZN5 1544 aa16.17■□□□□ 0.18
SUPT6H-204ENST00000577939 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
SUPT6H-204ENST00000577939 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
SUPT6H-204ENST00000577939 ATP7AQ04656 1500 aa16.15■□□□□ 0.18
SUPT6H-204ENST00000577939 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
SUPT6H-204ENST00000577939 TRAPPC8Q9Y2L5 1435 aa16.15■□□□□ 0.18
SUPT6H-204ENST00000577939 AGLP35573 1532 aa16.14■□□□□ 0.18
SUPT6H-204ENST00000577939 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
SUPT6H-204ENST00000577939 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
SUPT6H-204ENST00000577939 ZNF777Q9ULD5 760 aaPredicted RBP16.13■□□□□ 0.17
SUPT6H-204ENST00000577939 PREX1Q8TCU6 1659 aa16.12■□□□□ 0.17
SUPT6H-204ENST00000577939 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
SUPT6H-204ENST00000577939 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
SUPT6H-204ENST00000577939 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
SUPT6H-204ENST00000577939 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
SUPT6H-204ENST00000577939 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
SUPT6H-204ENST00000577939 SETD1BQ9UPS6 1966 aaKnown RBP16.08■□□□□ 0.16
SUPT6H-204ENST00000577939 MLECQ14165 292 aa16.08■□□□□ 0.16
SUPT6H-204ENST00000577939 CAMSAP2Q08AD1 1489 aa16.08■□□□□ 0.16
SUPT6H-204ENST00000577939 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
SUPT6H-204ENST00000577939 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
SUPT6H-204ENST00000577939 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
SUPT6H-204ENST00000577939 C3P01024 1663 aa16.06■□□□□ 0.16
SUPT6H-204ENST00000577939 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
SUPT6H-204ENST00000577939 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
SUPT6H-204ENST00000577939 ARHGEF5Q12774 1597 aa16.05■□□□□ 0.16
SUPT6H-204ENST00000577939 LMTK3Q96Q04 1460 aa16.04■□□□□ 0.16
SUPT6H-204ENST00000577939 APLP2Q06481 763 aa16.04■□□□□ 0.16
SUPT6H-204ENST00000577939 A2MP01023 1474 aa16.03■□□□□ 0.16
SUPT6H-204ENST00000577939 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.16
SUPT6H-204ENST00000577939 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
SUPT6H-204ENST00000577939 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
SUPT6H-204ENST00000577939 CLTCQ00610 1675 aaKnown RBP16■□□□□ 0.15
SUPT6H-204ENST00000577939 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
SUPT6H-204ENST00000577939 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
SUPT6H-204ENST00000577939 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
SUPT6H-204ENST00000577939 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
SUPT6H-204ENST00000577939 UHRF1BP1Q6BDS2 1440 aa15.98■□□□□ 0.15
SUPT6H-204ENST00000577939 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
SUPT6H-204ENST00000577939 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
SUPT6H-204ENST00000577939 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
SUPT6H-204ENST00000577939 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
SUPT6H-204ENST00000577939 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
SUPT6H-204ENST00000577939 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
SUPT6H-204ENST00000577939 NPATQ14207 1427 aa15.93■□□□□ 0.14
SUPT6H-204ENST00000577939 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
SUPT6H-204ENST00000577939 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
SUPT6H-204ENST00000577939 MYO3AQ8NEV4 1616 aa15.91■□□□□ 0.14
SUPT6H-204ENST00000577939 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
SUPT6H-204ENST00000577939 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
SUPT6H-204ENST00000577939 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
SUPT6H-204ENST00000577939 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
SUPT6H-204ENST00000577939 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
SUPT6H-204ENST00000577939 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
SUPT6H-204ENST00000577939 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
SUPT6H-204ENST00000577939 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
SUPT6H-204ENST00000577939 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
SUPT6H-204ENST00000577939 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
SUPT6H-204ENST00000577939 CEBPAP49715 358 aaPredicted RBP15.86■□□□□ 0.13
SUPT6H-204ENST00000577939 DUOX2Q9NRD8 1548 aa15.85■□□□□ 0.13
SUPT6H-204ENST00000577939 GGT6Q6P531 493 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms