RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 ATN1P54259 1190 aaPredicted RBP13.03□□□□□ -0.32
TOM1L1-222ENST00000575909 IER5LQ5T953 404 aa13.03□□□□□ -0.32
TOM1L1-222ENST00000575909 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
TOM1L1-222ENST00000575909 DSG2Q14126 1118 aa13.02□□□□□ -0.33
TOM1L1-222ENST00000575909 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
TOM1L1-222ENST00000575909 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
TOM1L1-222ENST00000575909 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
TOM1L1-222ENST00000575909 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
TOM1L1-222ENST00000575909 ZMYND10O75800 440 aa13□□□□□ -0.33
TOM1L1-222ENST00000575909 FOXK1P85037 733 aa13□□□□□ -0.33
TOM1L1-222ENST00000575909 EVX2Q03828 476 aa13□□□□□ -0.33
TOM1L1-222ENST00000575909 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
TOM1L1-222ENST00000575909 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
TOM1L1-222ENST00000575909 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
TOM1L1-222ENST00000575909 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-222ENST00000575909 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
TOM1L1-222ENST00000575909 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
TOM1L1-222ENST00000575909 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
TOM1L1-222ENST00000575909 G3V3G9 751 aa12.97□□□□□ -0.33
TOM1L1-222ENST00000575909 DPYSL4O14531 572 aa12.96□□□□□ -0.33
TOM1L1-222ENST00000575909 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
TOM1L1-222ENST00000575909 PDIA6Q15084 440 aa12.96□□□□□ -0.33
TOM1L1-222ENST00000575909 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
TOM1L1-222ENST00000575909 PLCG2P16885 1265 aa12.92□□□□□ -0.34
TOM1L1-222ENST00000575909 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
TOM1L1-222ENST00000575909 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
TOM1L1-222ENST00000575909 KIF3CO14782 793 aa12.91□□□□□ -0.34
TOM1L1-222ENST00000575909 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
TOM1L1-222ENST00000575909 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-222ENST00000575909 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
TOM1L1-222ENST00000575909 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
TOM1L1-222ENST00000575909 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
TOM1L1-222ENST00000575909 GABBR2O75899 941 aa12.84□□□□□ -0.35
TOM1L1-222ENST00000575909 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
TOM1L1-222ENST00000575909 AK7Q96M32 723 aa12.84□□□□□ -0.35
TOM1L1-222ENST00000575909 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.36
TOM1L1-222ENST00000575909 SEC24BO95487 1268 aa12.82□□□□□ -0.36
TOM1L1-222ENST00000575909 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
TOM1L1-222ENST00000575909 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
TOM1L1-222ENST00000575909 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
TOM1L1-222ENST00000575909 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-222ENST00000575909 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
TOM1L1-222ENST00000575909 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
TOM1L1-222ENST00000575909 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
TOM1L1-222ENST00000575909 GRXCR2A6NFK2 248 aa12.75□□□□□ -0.37
TOM1L1-222ENST00000575909 PTGER2P43116 358 aa12.74□□□□□ -0.37
TOM1L1-222ENST00000575909 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOM1L1-222ENST00000575909 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
TOM1L1-222ENST00000575909 TBC1D12O60347 775 aa12.73□□□□□ -0.37
TOM1L1-222ENST00000575909 C7P10643 843 aa12.73□□□□□ -0.37
TOM1L1-222ENST00000575909 GPR37O15354 613 aa12.71□□□□□ -0.37
TOM1L1-222ENST00000575909 TRIM66O15016 1216 aa12.7□□□□□ -0.38
TOM1L1-222ENST00000575909 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
TOM1L1-222ENST00000575909 OSBPP22059 807 aa12.69□□□□□ -0.38
TOM1L1-222ENST00000575909 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
TOM1L1-222ENST00000575909 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
TOM1L1-222ENST00000575909 EVI5O60447 810 aa12.66□□□□□ -0.38
TOM1L1-222ENST00000575909 PDE4DQ08499 809 aa12.66□□□□□ -0.38
TOM1L1-222ENST00000575909 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
TOM1L1-222ENST00000575909 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
TOM1L1-222ENST00000575909 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
TOM1L1-222ENST00000575909 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
TOM1L1-222ENST00000575909 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
TOM1L1-222ENST00000575909 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
TOM1L1-222ENST00000575909 DDX12PQ92771 950 aa12.64□□□□□ -0.39
TOM1L1-222ENST00000575909 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
TOM1L1-222ENST00000575909 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
TOM1L1-222ENST00000575909 FCHSD2O94868 740 aa12.62□□□□□ -0.39
TOM1L1-222ENST00000575909 SLC34A2O95436 690 aa12.62□□□□□ -0.39
TOM1L1-222ENST00000575909 GNPATO15228 680 aa12.61□□□□□ -0.39
TOM1L1-222ENST00000575909 HIC1Q14526 733 aa12.61□□□□□ -0.39
TOM1L1-222ENST00000575909 IRF6O14896 467 aa12.6□□□□□ -0.39
TOM1L1-222ENST00000575909 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
TOM1L1-222ENST00000575909 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
TOM1L1-222ENST00000575909 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-222ENST00000575909 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
TOM1L1-222ENST00000575909 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
TOM1L1-222ENST00000575909 PTGDRQ13258 359 aa12.54□□□□□ -0.4
TOM1L1-222ENST00000575909 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
TOM1L1-222ENST00000575909 AMHR2Q16671 573 aa12.53□□□□□ -0.4
TOM1L1-222ENST00000575909 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
TOM1L1-222ENST00000575909 EPAS1Q99814 870 aa12.52□□□□□ -0.41
TOM1L1-222ENST00000575909 PHF14O94880 888 aa12.51□□□□□ -0.41
TOM1L1-222ENST00000575909 FECHP22830 423 aa12.51□□□□□ -0.41
TOM1L1-222ENST00000575909 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-222ENST00000575909 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
TOM1L1-222ENST00000575909 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
TOM1L1-222ENST00000575909 FAM117AQ9C073 453 aa12.46□□□□□ -0.41
TOM1L1-222ENST00000575909 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
TOM1L1-222ENST00000575909 MAP3K7O43318 606 aa12.44□□□□□ -0.42
TOM1L1-222ENST00000575909 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
TOM1L1-222ENST00000575909 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
TOM1L1-222ENST00000575909 NPDC1Q9NQX5 325 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-222ENST00000575909 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
TOM1L1-222ENST00000575909 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
TOM1L1-222ENST00000575909 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
TOM1L1-222ENST00000575909 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
TOM1L1-222ENST00000575909 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
TOM1L1-222ENST00000575909 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
TOM1L1-222ENST00000575909 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms