RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 CCNB3Q8WWL7 1395 aa27.97■■■□□ 2.07
CLDN7-208ENST00000575313 SUPT6HQ7KZ85 1726 aaKnown RBP27.95■■■□□ 2.07
CLDN7-208ENST00000575313 GPATCH8Q9UKJ3 1502 aaKnown RBP27.94■■■□□ 2.06
CLDN7-208ENST00000575313 CDC42BPAQ5VT25 1732 aa27.94■■■□□ 2.06
CLDN7-208ENST00000575313 CDC42BPBQ9Y5S2 1711 aa27.94■■■□□ 2.06
CLDN7-208ENST00000575313 ADGRL1O94910 1474 aa27.92■■■□□ 2.06
CLDN7-208ENST00000575313 NCOA2Q15596 1464 aa27.92■■■□□ 2.06
CLDN7-208ENST00000575313 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
CLDN7-208ENST00000575313 DENND4BO75064 1496 aaPredicted RBP27.9■■■□□ 2.06
CLDN7-208ENST00000575313 SCAPERQ9BY12 1400 aa27.87■■■□□ 2.05
CLDN7-208ENST00000575313 CFDP1Q9UEE9 299 aaPredicted RBP27.87■■■□□ 2.05
CLDN7-208ENST00000575313 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
CLDN7-208ENST00000575313 RAPGEF3O95398 923 aa27.86■■■□□ 2.05
CLDN7-208ENST00000575313 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
CLDN7-208ENST00000575313 RICTORQ6R327 1708 aa27.82■■■□□ 2.04
CLDN7-208ENST00000575313 POGZQ7Z3K3 1410 aa27.82■■■□□ 2.04
CLDN7-208ENST00000575313 ZNF777Q9ULD5 760 aaPredicted RBP27.81■■■□□ 2.04
CLDN7-208ENST00000575313 ABCC1P33527 1531 aa27.81■■■□□ 2.04
CLDN7-208ENST00000575313 PLEKHH2Q8IVE3 1493 aa27.79■■■□□ 2.04
CLDN7-208ENST00000575313 SAMD9LQ8IVG5 1584 aa27.78■■■□□ 2.04
CLDN7-208ENST00000575313 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
CLDN7-208ENST00000575313 ZMYM4Q5VZL5 1548 aa27.76■■■□□ 2.03
CLDN7-208ENST00000575313 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
CLDN7-208ENST00000575313 MAGI2Q86UL8 1455 aa27.73■■■□□ 2.03
CLDN7-208ENST00000575313 MYOM3Q5VTT5 1437 aa27.73■■■□□ 2.03
CLDN7-208ENST00000575313 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
CLDN7-208ENST00000575313 SYCP2Q9BX26 1530 aa27.71■■■□□ 2.03
CLDN7-208ENST00000575313 KDM5CP41229 1560 aa27.69■■■□□ 2.02
CLDN7-208ENST00000575313 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
CLDN7-208ENST00000575313 TRAPPC8Q9Y2L5 1435 aa27.69■■■□□ 2.02
CLDN7-208ENST00000575313 AFAP1Q8N556 730 aa27.69■■■□□ 2.02
CLDN7-208ENST00000575313 ZNF644Q9H582 1327 aaPredicted RBP27.67■■■□□ 2.02
CLDN7-208ENST00000575313 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
CLDN7-208ENST00000575313 CAMSAP2Q08AD1 1489 aa27.66■■■□□ 2.02
CLDN7-208ENST00000575313 ZFYVE16Q7Z3T8 1539 aa27.66■■■□□ 2.02
CLDN7-208ENST00000575313 ARHGEF40Q8TER5 1519 aa27.66■■■□□ 2.02
CLDN7-208ENST00000575313 MLH3Q9UHC1 1453 aa27.63■■■□□ 2.01
CLDN7-208ENST00000575313 HECW2Q9P2P5 1572 aa27.62■■■□□ 2.01
CLDN7-208ENST00000575313 MBD5Q9P267 1494 aa27.62■■■□□ 2.01
CLDN7-208ENST00000575313 YEATS2Q9ULM3 1422 aa27.6■■■□□ 2.01
CLDN7-208ENST00000575313 RSPH4AQ5TD94 716 aa27.6■■■□□ 2.01
CLDN7-208ENST00000575313 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
CLDN7-208ENST00000575313 MYT1LQ9UL68 1186 aa27.59■■■□□ 2.01
CLDN7-208ENST00000575313 FGD6Q6ZV73 1430 aa27.58■■■□□ 2
CLDN7-208ENST00000575313 SPAG9O60271 1321 aaKnown RBP27.57■■■□□ 2
CLDN7-208ENST00000575313 CCDC141Q6ZP82 1450 aa27.56■■■□□ 2
CLDN7-208ENST00000575313 ATP10AO60312 1499 aa27.55■■■□□ 2
CLDN7-208ENST00000575313 ARHGEF5Q12774 1597 aa27.55■■■□□ 2
CLDN7-208ENST00000575313 PTPN23Q9H3S7 1636 aa27.53■■■□□ 2
CLDN7-208ENST00000575313 C9orf84Q5VXU9 1444 aa27.51■■□□□ 1.99
CLDN7-208ENST00000575313 KIDINS220Q9ULH0 1771 aa27.51■■□□□ 1.99
CLDN7-208ENST00000575313 INO80Q9ULG1 1556 aaPredicted RBP27.51■■□□□ 1.99
CLDN7-208ENST00000575313 ATP7AQ04656 1500 aa27.51■■□□□ 1.99
CLDN7-208ENST00000575313 TCOF1Q13428 1488 aaKnown RBP27.51■■□□□ 1.99
CLDN7-208ENST00000575313 DIP2CQ9Y2E4 1556 aa27.5■■□□□ 1.99
CLDN7-208ENST00000575313 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
CLDN7-208ENST00000575313 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
CLDN7-208ENST00000575313 ARID4BQ4LE39 1312 aaPredicted RBP27.47■■□□□ 1.99
CLDN7-208ENST00000575313 TSPY4P0CV99 314 aa27.47■■□□□ 1.99
CLDN7-208ENST00000575313 TSPY10P0CW01 314 aa27.47■■□□□ 1.99
CLDN7-208ENST00000575313 REREQ9P2R6 1566 aa27.46■■□□□ 1.99
CLDN7-208ENST00000575313 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
CLDN7-208ENST00000575313 MAST1Q9Y2H9 1570 aa27.39■■□□□ 1.98
CLDN7-208ENST00000575313 FAM50AQ14320 339 aaKnown RBP27.39■■□□□ 1.98
CLDN7-208ENST00000575313 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
CLDN7-208ENST00000575313 SIGLEC1Q9BZZ2 1709 aa27.38■■□□□ 1.97
CLDN7-208ENST00000575313 AGLP35573 1532 aa27.37■■□□□ 1.97
CLDN7-208ENST00000575313 ABCC5O15440 1437 aa27.37■■□□□ 1.97
CLDN7-208ENST00000575313 DAPK1P53355 1430 aa27.37■■□□□ 1.97
CLDN7-208ENST00000575313 BCORL1Q5H9F3 1711 aa27.37■■□□□ 1.97
CLDN7-208ENST00000575313 SHANK2Q9UPX8 1470 aa27.37■■□□□ 1.97
CLDN7-208ENST00000575313 ADGBQ8N7X0 1667 aa27.36■■□□□ 1.97
CLDN7-208ENST00000575313 A2MP01023 1474 aa27.36■■□□□ 1.97
CLDN7-208ENST00000575313 CROCC2H7BZ55 1655 aa27.34■■□□□ 1.97
CLDN7-208ENST00000575313 PLXNC1O60486 1568 aa27.32■■□□□ 1.96
CLDN7-208ENST00000575313 ADAMTSL3P82987 1691 aa27.32■■□□□ 1.96
CLDN7-208ENST00000575313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.96
CLDN7-208ENST00000575313 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
CLDN7-208ENST00000575313 RRBP1Q9P2E9 1410 aaKnown RBP27.28■■□□□ 1.96
CLDN7-208ENST00000575313 MLECQ14165 292 aa27.28■■□□□ 1.96
CLDN7-208ENST00000575313 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
CLDN7-208ENST00000575313 MADDQ8WXG6 1647 aa27.23■■□□□ 1.95
CLDN7-208ENST00000575313 ANKRD30AQ9BXX3 1397 aa27.22■■□□□ 1.95
CLDN7-208ENST00000575313 KIF15Q9NS87 1388 aa27.21■■□□□ 1.95
CLDN7-208ENST00000575313 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
CLDN7-208ENST00000575313 ADGRL2O95490 1459 aa27.2■■□□□ 1.95
CLDN7-208ENST00000575313 CHIC2Q9UKJ5 165 aa27.2■■□□□ 1.94
CLDN7-208ENST00000575313 NCOA1Q15788 1441 aa27.18■■□□□ 1.94
CLDN7-208ENST00000575313 FER1L4A9Z1Z3 1794 aa27.18■■□□□ 1.94
CLDN7-208ENST00000575313 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
CLDN7-208ENST00000575313 PTPRMP28827 1452 aa27.17■■□□□ 1.94
CLDN7-208ENST00000575313 KIF3BO15066 747 aa27.16■■□□□ 1.94
CLDN7-208ENST00000575313 RIMS1Q86UR5 1692 aaKnown RBP27.16■■□□□ 1.94
CLDN7-208ENST00000575313 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
CLDN7-208ENST00000575313 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
CLDN7-208ENST00000575313 PPP6R1Q9UPN7 881 aa27.14■■□□□ 1.94
CLDN7-208ENST00000575313 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
CLDN7-208ENST00000575313 ERBINQ96RT1 1412 aa27.14■■□□□ 1.93
CLDN7-208ENST00000575313 GGT6Q6P531 493 aa27.13■■□□□ 1.93
CLDN7-208ENST00000575313 ROCK1Q13464 1354 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms