RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
CDC27-216ENST00000574304 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
CDC27-216ENST00000574304 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
CDC27-216ENST00000574304 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
CDC27-216ENST00000574304 KIF3CO14782 793 aa12.64□□□□□ -0.39
CDC27-216ENST00000574304 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
CDC27-216ENST00000574304 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
CDC27-216ENST00000574304 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
CDC27-216ENST00000574304 PDE4AP27815 886 aa12.62□□□□□ -0.39
CDC27-216ENST00000574304 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
CDC27-216ENST00000574304 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
CDC27-216ENST00000574304 FOXK1P85037 733 aa12.55□□□□□ -0.4
CDC27-216ENST00000574304 DSG2Q14126 1118 aa12.55□□□□□ -0.4
CDC27-216ENST00000574304 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
CDC27-216ENST00000574304 SNPHO15079 494 aa12.53□□□□□ -0.4
CDC27-216ENST00000574304 MFSD10Q14728 455 aa12.53□□□□□ -0.4
CDC27-216ENST00000574304 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
CDC27-216ENST00000574304 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
CDC27-216ENST00000574304 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CDC27-216ENST00000574304 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
CDC27-216ENST00000574304 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
CDC27-216ENST00000574304 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
CDC27-216ENST00000574304 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
CDC27-216ENST00000574304 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
CDC27-216ENST00000574304 SLC34A2O95436 690 aa12.42□□□□□ -0.42
CDC27-216ENST00000574304 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
CDC27-216ENST00000574304 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
CDC27-216ENST00000574304 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
CDC27-216ENST00000574304 ST18O60284 1047 aa12.38□□□□□ -0.43
CDC27-216ENST00000574304 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
CDC27-216ENST00000574304 E2F4Q16254 413 aa12.37□□□□□ -0.43
CDC27-216ENST00000574304 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
CDC27-216ENST00000574304 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDC27-216ENST00000574304 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
CDC27-216ENST00000574304 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
CDC27-216ENST00000574304 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
CDC27-216ENST00000574304 ARSIQ5FYB1 569 aa12.34□□□□□ -0.43
CDC27-216ENST00000574304 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
CDC27-216ENST00000574304 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
CDC27-216ENST00000574304 TBC1D12O60347 775 aa12.33□□□□□ -0.44
CDC27-216ENST00000574304 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
CDC27-216ENST00000574304 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
CDC27-216ENST00000574304 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.447e-7■■□□□ 13
CDC27-216ENST00000574304 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
CDC27-216ENST00000574304 NUDT7P0C024 238 aa12.27□□□□□ -0.45
CDC27-216ENST00000574304 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
CDC27-216ENST00000574304 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
CDC27-216ENST00000574304 DPYSL4O14531 572 aa12.26□□□□□ -0.45
CDC27-216ENST00000574304 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
CDC27-216ENST00000574304 EMP3P54852 163 aa12.24□□□□□ -0.45
CDC27-216ENST00000574304 ARIH1Q9Y4X5 557 aaPredicted RBP12.24□□□□□ -0.45
CDC27-216ENST00000574304 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
CDC27-216ENST00000574304 EVI5O60447 810 aa12.22□□□□□ -0.45
CDC27-216ENST00000574304 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
CDC27-216ENST00000574304 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
CDC27-216ENST00000574304 ERBB3P21860 1342 aa12.18□□□□□ -0.46
CDC27-216ENST00000574304 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
CDC27-216ENST00000574304 PDIA6Q15084 440 aa12.17□□□□□ -0.46
CDC27-216ENST00000574304 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
CDC27-216ENST00000574304 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
CDC27-216ENST00000574304 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
CDC27-216ENST00000574304 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
CDC27-216ENST00000574304 POTEMA6NI47 508 aa12.15□□□□□ -0.46
CDC27-216ENST00000574304 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
CDC27-216ENST00000574304 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
CDC27-216ENST00000574304 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
CDC27-216ENST00000574304 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
CDC27-216ENST00000574304 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
CDC27-216ENST00000574304 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
CDC27-216ENST00000574304 PTGER2P43116 358 aa12.07□□□□□ -0.48
CDC27-216ENST00000574304 FOSBP53539 338 aa12.07□□□□□ -0.48
CDC27-216ENST00000574304 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
CDC27-216ENST00000574304 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
CDC27-216ENST00000574304 DDX12PQ92771 950 aa12.06□□□□□ -0.48
CDC27-216ENST00000574304 PHF14O94880 888 aa12.04□□□□□ -0.48
CDC27-216ENST00000574304 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
CDC27-216ENST00000574304 SEMA3EO15041 775 aa12.03□□□□□ -0.48
CDC27-216ENST00000574304 ZNF687Q8N1G0 1237 aa12.03□□□□□ -0.48
CDC27-216ENST00000574304 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
CDC27-216ENST00000574304 EPAS1Q99814 870 aa12.01□□□□□ -0.49
CDC27-216ENST00000574304 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
CDC27-216ENST00000574304 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
CDC27-216ENST00000574304 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
CDC27-216ENST00000574304 NBR1Q14596 966 aa11.99□□□□□ -0.49
CDC27-216ENST00000574304 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
CDC27-216ENST00000574304 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
CDC27-216ENST00000574304 ADAM33Q9BZ11 813 aa11.97□□□□□ -0.49
CDC27-216ENST00000574304 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
CDC27-216ENST00000574304 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
CDC27-216ENST00000574304 OSBPP22059 807 aa11.95□□□□□ -0.5
CDC27-216ENST00000574304 PBX2P40425 430 aa11.95□□□□□ -0.5
CDC27-216ENST00000574304 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
CDC27-216ENST00000574304 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
CDC27-216ENST00000574304 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
CDC27-216ENST00000574304 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
CDC27-216ENST00000574304 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
CDC27-216ENST00000574304 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
CDC27-216ENST00000574304 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
CDC27-216ENST00000574304 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
CDC27-216ENST00000574304 MAP3K7O43318 606 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms