RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 TIAM1Q13009 1591 aa15.61■□□□□ 0.09
NDE1-210ENST00000574163 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
NDE1-210ENST00000574163 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
NDE1-210ENST00000574163 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
NDE1-210ENST00000574163 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
NDE1-210ENST00000574163 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
NDE1-210ENST00000574163 MTUS2Q5JR59 1369 aa15.58■□□□□ 0.08
NDE1-210ENST00000574163 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.08
NDE1-210ENST00000574163 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.08
NDE1-210ENST00000574163 DENND4BO75064 1496 aaPredicted RBP15.56■□□□□ 0.08
NDE1-210ENST00000574163 ADGRL1O94910 1474 aa15.56■□□□□ 0.08
NDE1-210ENST00000574163 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
NDE1-210ENST00000574163 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
NDE1-210ENST00000574163 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
NDE1-210ENST00000574163 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
NDE1-210ENST00000574163 ABCC1P33527 1531 aa15.53■□□□□ 0.08
NDE1-210ENST00000574163 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
NDE1-210ENST00000574163 KDM5CP41229 1560 aa15.51■□□□□ 0.07
NDE1-210ENST00000574163 GPATCH8Q9UKJ3 1502 aaKnown RBP15.51■□□□□ 0.07
NDE1-210ENST00000574163 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
NDE1-210ENST00000574163 MAGI2Q86UL8 1455 aa15.51■□□□□ 0.07
NDE1-210ENST00000574163 ZNF518AQ6AHZ1 1483 aa15.5■□□□□ 0.07
NDE1-210ENST00000574163 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
NDE1-210ENST00000574163 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
NDE1-210ENST00000574163 SAMD9LQ8IVG5 1584 aa15.49■□□□□ 0.07
NDE1-210ENST00000574163 PLEKHH2Q8IVE3 1493 aa15.48■□□□□ 0.07
NDE1-210ENST00000574163 CCNB3Q8WWL7 1395 aa15.48■□□□□ 0.07
NDE1-210ENST00000574163 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
NDE1-210ENST00000574163 ZFYVE16Q7Z3T8 1539 aa15.47■□□□□ 0.07
NDE1-210ENST00000574163 HECW2Q9P2P5 1572 aa15.46■□□□□ 0.07
NDE1-210ENST00000574163 RAPGEF3O95398 923 aa15.46■□□□□ 0.07
NDE1-210ENST00000574163 SYCP2Q9BX26 1530 aa15.44■□□□□ 0.06
NDE1-210ENST00000574163 KIAA1107Q9UPP5 1409 aa15.43■□□□□ 0.06
NDE1-210ENST00000574163 ARHGEF12Q9NZN5 1544 aa15.43■□□□□ 0.06
NDE1-210ENST00000574163 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
NDE1-210ENST00000574163 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
NDE1-210ENST00000574163 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
NDE1-210ENST00000574163 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
NDE1-210ENST00000574163 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
NDE1-210ENST00000574163 INO80Q9ULG1 1556 aaPredicted RBP15.38■□□□□ 0.05
NDE1-210ENST00000574163 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
NDE1-210ENST00000574163 APLP2Q06481 763 aa15.38■□□□□ 0.05
NDE1-210ENST00000574163 ABCA6Q8N139 1617 aa15.38■□□□□ 0.05
NDE1-210ENST00000574163 CAMSAP2Q08AD1 1489 aa15.38■□□□□ 0.05
NDE1-210ENST00000574163 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
NDE1-210ENST00000574163 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
NDE1-210ENST00000574163 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
NDE1-210ENST00000574163 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
NDE1-210ENST00000574163 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
NDE1-210ENST00000574163 MIA2Q96PC5 1412 aa15.35■□□□□ 0.05
NDE1-210ENST00000574163 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
NDE1-210ENST00000574163 ATP10AO60312 1499 aa15.35■□□□□ 0.05
NDE1-210ENST00000574163 ATP7AQ04656 1500 aa15.35■□□□□ 0.05
NDE1-210ENST00000574163 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
NDE1-210ENST00000574163 MBD5Q9P267 1494 aa15.34■□□□□ 0.05
NDE1-210ENST00000574163 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
NDE1-210ENST00000574163 KDM4FA0A1W2PPD8 638 aa15.33■□□□□ 0.04
NDE1-210ENST00000574163 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
NDE1-210ENST00000574163 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.04
NDE1-210ENST00000574163 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
NDE1-210ENST00000574163 AGLP35573 1532 aa15.32■□□□□ 0.04
NDE1-210ENST00000574163 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
NDE1-210ENST00000574163 MADDQ8WXG6 1647 aa15.29■□□□□ 0.04
NDE1-210ENST00000574163 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
NDE1-210ENST00000574163 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
NDE1-210ENST00000574163 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
NDE1-210ENST00000574163 PTPN23Q9H3S7 1636 aa15.28■□□□□ 0.04
NDE1-210ENST00000574163 MAST1Q9Y2H9 1570 aa15.28■□□□□ 0.04
NDE1-210ENST00000574163 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.04
NDE1-210ENST00000574163 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.04
NDE1-210ENST00000574163 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
NDE1-210ENST00000574163 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.04
NDE1-210ENST00000574163 CROCC2H7BZ55 1655 aa15.27■□□□□ 0.03
NDE1-210ENST00000574163 TCOF1Q13428 1488 aaKnown RBP15.27■□□□□ 0.03
NDE1-210ENST00000574163 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
NDE1-210ENST00000574163 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
NDE1-210ENST00000574163 SHANK2Q9UPX8 1470 aa15.24■□□□□ 0.03
NDE1-210ENST00000574163 RIMS1Q86UR5 1692 aaKnown RBP15.24■□□□□ 0.03
NDE1-210ENST00000574163 A2MP01023 1474 aa15.23■□□□□ 0.03
NDE1-210ENST00000574163 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
NDE1-210ENST00000574163 DNMT1P26358 1616 aaKnown RBP15.23■□□□□ 0.03
NDE1-210ENST00000574163 PTPRMP28827 1452 aa15.22■□□□□ 0.03
NDE1-210ENST00000574163 FAM135AQ9P2D6 1515 aa15.19■□□□□ 0.02
NDE1-210ENST00000574163 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
NDE1-210ENST00000574163 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
NDE1-210ENST00000574163 DAPK1P53355 1430 aa15.17■□□□□ 0.02
NDE1-210ENST00000574163 ABCC5O15440 1437 aa15.16■□□□□ 0.02
NDE1-210ENST00000574163 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
NDE1-210ENST00000574163 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
NDE1-210ENST00000574163 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
NDE1-210ENST00000574163 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
NDE1-210ENST00000574163 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
NDE1-210ENST00000574163 DUOX2Q9NRD8 1548 aa15.12■□□□□ 0.01
NDE1-210ENST00000574163 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
NDE1-210ENST00000574163 MLECQ14165 292 aa15.11■□□□□ 0.01
NDE1-210ENST00000574163 C3P01024 1663 aa15.11■□□□□ 0.01
NDE1-210ENST00000574163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
NDE1-210ENST00000574163 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
NDE1-210ENST00000574163 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
NDE1-210ENST00000574163 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms