RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 YEATS2Q9ULM3 1422 aa20.41■□□□□ 0.86
POLR2A-202ENST00000573603 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
POLR2A-202ENST00000573603 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
POLR2A-202ENST00000573603 PCF11O94913 1555 aaKnown RBP20.37■□□□□ 0.85
POLR2A-202ENST00000573603 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
POLR2A-202ENST00000573603 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
POLR2A-202ENST00000573603 CDK11AQ9UQ88 783 aaPredicted RBP20.35■□□□□ 0.85
POLR2A-202ENST00000573603 CLIP1P30622 1438 aa20.35■□□□□ 0.85
POLR2A-202ENST00000573603 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
POLR2A-202ENST00000573603 FER1L4A9Z1Z3 1794 aa20.34■□□□□ 0.85
POLR2A-202ENST00000573603 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
POLR2A-202ENST00000573603 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
POLR2A-202ENST00000573603 EFCAB2Q5VUJ9 269 aa20.31■□□□□ 0.84
POLR2A-202ENST00000573603 MLECQ14165 292 aa20.3■□□□□ 0.84
POLR2A-202ENST00000573603 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
POLR2A-202ENST00000573603 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
POLR2A-202ENST00000573603 CCDC18Q5T9S5 1454 aa20.27■□□□□ 0.84
POLR2A-202ENST00000573603 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
POLR2A-202ENST00000573603 PREX2Q70Z35 1606 aa20.27■□□□□ 0.83
POLR2A-202ENST00000573603 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.83
POLR2A-202ENST00000573603 ATP10AO60312 1499 aa20.26■□□□□ 0.83
POLR2A-202ENST00000573603 KDM5CP41229 1560 aa20.25■□□□□ 0.83
POLR2A-202ENST00000573603 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
POLR2A-202ENST00000573603 FYCO1Q9BQS8 1478 aa20.22■□□□□ 0.83
POLR2A-202ENST00000573603 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
POLR2A-202ENST00000573603 ABCC1P33527 1531 aa20.22■□□□□ 0.83
POLR2A-202ENST00000573603 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
POLR2A-202ENST00000573603 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
POLR2A-202ENST00000573603 ABCA6Q8N139 1617 aa20.2■□□□□ 0.82
POLR2A-202ENST00000573603 CDC42BPAQ5VT25 1732 aa20.2■□□□□ 0.82
POLR2A-202ENST00000573603 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
POLR2A-202ENST00000573603 HSPA2P54652 639 aa20.19■□□□□ 0.82
POLR2A-202ENST00000573603 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
POLR2A-202ENST00000573603 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
POLR2A-202ENST00000573603 REREQ9P2R6 1566 aa20.14■□□□□ 0.81
POLR2A-202ENST00000573603 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
POLR2A-202ENST00000573603 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
POLR2A-202ENST00000573603 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
POLR2A-202ENST00000573603 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
POLR2A-202ENST00000573603 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
POLR2A-202ENST00000573603 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
POLR2A-202ENST00000573603 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.81
POLR2A-202ENST00000573603 AGLP35573 1532 aa20.07■□□□□ 0.8
POLR2A-202ENST00000573603 C3P01024 1663 aa20.07■□□□□ 0.8
POLR2A-202ENST00000573603 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
POLR2A-202ENST00000573603 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
POLR2A-202ENST00000573603 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
POLR2A-202ENST00000573603 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
POLR2A-202ENST00000573603 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
POLR2A-202ENST00000573603 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
POLR2A-202ENST00000573603 ATP7AQ04656 1500 aa19.99■□□□□ 0.79
POLR2A-202ENST00000573603 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
POLR2A-202ENST00000573603 STRCQ7RTU9 1775 aa19.98■□□□□ 0.79
POLR2A-202ENST00000573603 HNRNPMP52272 730 aaKnown RBP eCLIP19.98■□□□□ 0.79
POLR2A-202ENST00000573603 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
POLR2A-202ENST00000573603 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
POLR2A-202ENST00000573603 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
POLR2A-202ENST00000573603 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
POLR2A-202ENST00000573603 PLEKHH2Q8IVE3 1493 aa19.97■□□□□ 0.79
POLR2A-202ENST00000573603 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
POLR2A-202ENST00000573603 SETD1BQ9UPS6 1966 aaKnown RBP19.95■□□□□ 0.78
POLR2A-202ENST00000573603 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
POLR2A-202ENST00000573603 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
POLR2A-202ENST00000573603 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
POLR2A-202ENST00000573603 PLXNC1O60486 1568 aa19.93■□□□□ 0.78
POLR2A-202ENST00000573603 CLTCQ00610 1675 aaKnown RBP19.92■□□□□ 0.78
POLR2A-202ENST00000573603 CERKQ8TCT0 537 aa19.91■□□□□ 0.78
POLR2A-202ENST00000573603 A2MP01023 1474 aa19.91■□□□□ 0.78
POLR2A-202ENST00000573603 ADGBQ8N7X0 1667 aa19.9■□□□□ 0.78
POLR2A-202ENST00000573603 ZNF644Q9H582 1327 aaPredicted RBP19.88■□□□□ 0.77
POLR2A-202ENST00000573603 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
POLR2A-202ENST00000573603 NPATQ14207 1427 aa19.85■□□□□ 0.77
POLR2A-202ENST00000573603 MYO3AQ8NEV4 1616 aa19.84■□□□□ 0.77
POLR2A-202ENST00000573603 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
POLR2A-202ENST00000573603 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
POLR2A-202ENST00000573603 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
POLR2A-202ENST00000573603 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
POLR2A-202ENST00000573603 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
POLR2A-202ENST00000573603 GGT6Q6P531 493 aa19.82■□□□□ 0.76
POLR2A-202ENST00000573603 PTPRTO14522 1441 aa19.82■□□□□ 0.76
POLR2A-202ENST00000573603 CAMSAP2Q08AD1 1489 aa19.81■□□□□ 0.76
POLR2A-202ENST00000573603 ZNF142P52746 1687 aaPredicted RBP19.81■□□□□ 0.76
POLR2A-202ENST00000573603 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
POLR2A-202ENST00000573603 CEP170BQ9Y4F5 1589 aaPredicted RBP19.77■□□□□ 0.76
POLR2A-202ENST00000573603 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
POLR2A-202ENST00000573603 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
POLR2A-202ENST00000573603 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
POLR2A-202ENST00000573603 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
POLR2A-202ENST00000573603 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
POLR2A-202ENST00000573603 ARHGEF5Q12774 1597 aa19.71■□□□□ 0.75
POLR2A-202ENST00000573603 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
POLR2A-202ENST00000573603 LRRC9Q6ZRR7 1453 aa19.71■□□□□ 0.75
POLR2A-202ENST00000573603 NCKAP5LQ9HCH0 1330 aa19.71■□□□□ 0.75
POLR2A-202ENST00000573603 KDM5DQ9BY66 1539 aa19.7■□□□□ 0.74
POLR2A-202ENST00000573603 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
POLR2A-202ENST00000573603 KIF3BO15066 747 aa19.69■□□□□ 0.74
POLR2A-202ENST00000573603 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
POLR2A-202ENST00000573603 DNMT1P26358 1616 aaKnown RBP19.66■□□□□ 0.74
POLR2A-202ENST00000573603 A2ML1A8K2U0 1454 aa19.66■□□□□ 0.74
POLR2A-202ENST00000573603 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms