RNA–Protein interactions for RNA: ENST00000573502.1

CDC27-214, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-214ENST00000573502 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
CDC27-214ENST00000573502 KIF3CO14782 793 aa11.1□□□□□ -0.63
CDC27-214ENST00000573502 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
CDC27-214ENST00000573502 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
CDC27-214ENST00000573502 BCANQ96GW7 911 aa11.09□□□□□ -0.63
CDC27-214ENST00000573502 WDR70Q9NW82 654 aa11.09□□□□□ -0.63
CDC27-214ENST00000573502 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
CDC27-214ENST00000573502 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
CDC27-214ENST00000573502 E2F4Q16254 413 aa11.05□□□□□ -0.64
CDC27-214ENST00000573502 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 G3V3G9 751 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 CAMK2BQ13554 666 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 DSG2Q14126 1118 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
CDC27-214ENST00000573502 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
CDC27-214ENST00000573502 FOXK1P85037 733 aa11.02□□□□□ -0.65
CDC27-214ENST00000573502 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
CDC27-214ENST00000573502 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
CDC27-214ENST00000573502 ARIH1Q9Y4X5 557 aaPredicted RBP10.98□□□□□ -0.65
CDC27-214ENST00000573502 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
CDC27-214ENST00000573502 NBR1Q14596 966 aa10.96□□□□□ -0.65
CDC27-214ENST00000573502 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
CDC27-214ENST00000573502 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
CDC27-214ENST00000573502 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.91□□□□□ -0.66
CDC27-214ENST00000573502 LHX8Q68G74 356 aa10.87□□□□□ -0.67
CDC27-214ENST00000573502 DPYSL4O14531 572 aa10.86□□□□□ -0.67
CDC27-214ENST00000573502 SEMA3EO15041 775 aa10.85□□□□□ -0.67
CDC27-214ENST00000573502 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
CDC27-214ENST00000573502 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
CDC27-214ENST00000573502 PDIA6Q15084 440 aa10.82□□□□□ -0.68
CDC27-214ENST00000573502 SLC34A2O95436 690 aa10.81□□□□□ -0.68
CDC27-214ENST00000573502 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
CDC27-214ENST00000573502 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDC27-214ENST00000573502 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
CDC27-214ENST00000573502 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
CDC27-214ENST00000573502 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
CDC27-214ENST00000573502 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
CDC27-214ENST00000573502 SPDYE16A6NNV3 312 aaPredicted RBP10.77□□□□□ -0.69
CDC27-214ENST00000573502 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.69
CDC27-214ENST00000573502 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
CDC27-214ENST00000573502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDC27-214ENST00000573502 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
CDC27-214ENST00000573502 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
CDC27-214ENST00000573502 KDM4FA0A1W2PPD8 638 aa10.72□□□□□ -0.69
CDC27-214ENST00000573502 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
CDC27-214ENST00000573502 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
CDC27-214ENST00000573502 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
CDC27-214ENST00000573502 EVI5O60447 810 aa10.7□□□□□ -0.7
CDC27-214ENST00000573502 PTGER2P43116 358 aa10.69□□□□□ -0.7
CDC27-214ENST00000573502 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
CDC27-214ENST00000573502 TBC1D12O60347 775 aa10.67□□□□□ -0.7
CDC27-214ENST00000573502 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
CDC27-214ENST00000573502 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
CDC27-214ENST00000573502 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.72e-7■□□□□ 10.5
CDC27-214ENST00000573502 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
CDC27-214ENST00000573502 RBM26Q5T8P6 1007 aaKnown RBP10.64□□□□□ -0.71
CDC27-214ENST00000573502 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
CDC27-214ENST00000573502 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
CDC27-214ENST00000573502 OSBPP22059 807 aa10.63□□□□□ -0.71
CDC27-214ENST00000573502 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
CDC27-214ENST00000573502 DDX12PQ92771 950 aa10.63□□□□□ -0.71
CDC27-214ENST00000573502 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
CDC27-214ENST00000573502 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
CDC27-214ENST00000573502 NUDT7P0C024 238 aa10.6□□□□□ -0.71
CDC27-214ENST00000573502 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
CDC27-214ENST00000573502 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
CDC27-214ENST00000573502 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
CDC27-214ENST00000573502 GPR37O15354 613 aa10.58□□□□□ -0.72
CDC27-214ENST00000573502 SNPHO15079 494 aa10.57□□□□□ -0.72
CDC27-214ENST00000573502 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
CDC27-214ENST00000573502 PHF14O94880 888 aa10.56□□□□□ -0.72
CDC27-214ENST00000573502 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
CDC27-214ENST00000573502 HOXB1P14653 301 aaPredicted RBP10.55□□□□□ -0.72
CDC27-214ENST00000573502 FOSBP53539 338 aa10.55□□□□□ -0.72
CDC27-214ENST00000573502 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
CDC27-214ENST00000573502 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
CDC27-214ENST00000573502 ZMYND10O75800 440 aa10.52□□□□□ -0.73
CDC27-214ENST00000573502 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
CDC27-214ENST00000573502 EPAS1Q99814 870 aa10.52□□□□□ -0.73
CDC27-214ENST00000573502 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
CDC27-214ENST00000573502 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
CDC27-214ENST00000573502 BARGINQ6ZT62 677 aa10.48□□□□□ -0.73
CDC27-214ENST00000573502 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
CDC27-214ENST00000573502 CDHR5Q9HBB8 845 aa10.48□□□□□ -0.73
CDC27-214ENST00000573502 ST18O60284 1047 aa10.47□□□□□ -0.73
CDC27-214ENST00000573502 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
CDC27-214ENST00000573502 NUTM2FA1L443 756 aa10.46□□□□□ -0.73
CDC27-214ENST00000573502 PTGDRQ13258 359 aa10.46□□□□□ -0.73
CDC27-214ENST00000573502 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
CDC27-214ENST00000573502 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.73
CDC27-214ENST00000573502 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
CDC27-214ENST00000573502 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
CDC27-214ENST00000573502 NPDC1Q9NQX5 325 aaPredicted RBP10.46□□□□□ -0.73
CDC27-214ENST00000573502 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
CDC27-214ENST00000573502 MAP3K7O43318 606 aa10.44□□□□□ -0.74
CDC27-214ENST00000573502 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
CDC27-214ENST00000573502 PSDA5PKW4 1024 aaPredicted RBP10.41□□□□□ -0.74
CDC27-214ENST00000573502 FCHSD2O94868 740 aa10.41□□□□□ -0.74
CDC27-214ENST00000573502 FECHP22830 423 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms