RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 FANCAO15360 1455 aa36.09■■■■□ 3.37
TVP23A-206ENST00000572980 CDC42BPBQ9Y5S2 1711 aa36.07■■■■□ 3.37
TVP23A-206ENST00000572980 NEO1Q92859 1461 aa36.07■■■■□ 3.37
TVP23A-206ENST00000572980 CFDP1Q9UEE9 299 aaPredicted RBP36.07■■■■□ 3.37
TVP23A-206ENST00000572980 PHLDB1Q86UU1 1377 aa36.07■■■■□ 3.36
TVP23A-206ENST00000572980 ITSN2Q9NZM3 1697 aa36.06■■■■□ 3.36
TVP23A-206ENST00000572980 CFAP74Q9C0B2 1584 aa36.06■■■■□ 3.36
TVP23A-206ENST00000572980 AKNAQ7Z591 1439 aa36■■■■□ 3.35
TVP23A-206ENST00000572980 MYOM3Q5VTT5 1437 aa35.99■■■■□ 3.35
TVP23A-206ENST00000572980 ZNF777Q9ULD5 760 aaPredicted RBP35.98■■■■□ 3.35
TVP23A-206ENST00000572980 MIA2Q96PC5 1412 aa35.93■■■■□ 3.34
TVP23A-206ENST00000572980 ADGRL1O94910 1474 aa35.91■■■■□ 3.34
TVP23A-206ENST00000572980 KDM6BO15054 1643 aa35.88■■■■□ 3.33
TVP23A-206ENST00000572980 SCAPERQ9BY12 1400 aa35.87■■■■□ 3.33
TVP23A-206ENST00000572980 SAMD9LQ8IVG5 1584 aa35.87■■■■□ 3.33
TVP23A-206ENST00000572980 PLEKHH2Q8IVE3 1493 aa35.86■■■■□ 3.33
TVP23A-206ENST00000572980 ZNF644Q9H582 1327 aaPredicted RBP35.85■■■■□ 3.33
TVP23A-206ENST00000572980 FGD6Q6ZV73 1430 aa35.85■■■■□ 3.33
TVP23A-206ENST00000572980 COL17A1Q9UMD9 1497 aaPredicted RBP35.84■■■■□ 3.33
TVP23A-206ENST00000572980 DENND4BO75064 1496 aaPredicted RBP35.83■■■■□ 3.33
TVP23A-206ENST00000572980 ABCC1P33527 1531 aa35.82■■■■□ 3.33
TVP23A-206ENST00000572980 KIAA1107Q9UPP5 1409 aa35.82■■■■□ 3.32
TVP23A-206ENST00000572980 CAMSAP2Q08AD1 1489 aa35.8■■■■□ 3.32
TVP23A-206ENST00000572980 RAPGEF3O95398 923 aa35.79■■■■□ 3.32
TVP23A-206ENST00000572980 HNRNPMP52272 730 aaKnown RBP eCLIP35.77■■■■□ 3.32
TVP23A-206ENST00000572980 PTPN23Q9H3S7 1636 aa35.76■■■■□ 3.32
TVP23A-206ENST00000572980 SYCP2Q9BX26 1530 aa35.76■■■■□ 3.31
TVP23A-206ENST00000572980 ARHGEF12Q9NZN5 1544 aa35.76■■■■□ 3.31
TVP23A-206ENST00000572980 POGZQ7Z3K3 1410 aa35.74■■■■□ 3.31
TVP23A-206ENST00000572980 ZNF518AQ6AHZ1 1483 aa35.72■■■■□ 3.31
TVP23A-206ENST00000572980 TCOF1Q13428 1488 aaKnown RBP35.71■■■■□ 3.31
TVP23A-206ENST00000572980 RSPH4AQ5TD94 716 aa35.71■■■■□ 3.31
TVP23A-206ENST00000572980 RICTORQ6R327 1708 aa35.7■■■■□ 3.31
TVP23A-206ENST00000572980 AFAP1Q8N556 730 aa35.7■■■■□ 3.31
TVP23A-206ENST00000572980 TRAPPC8Q9Y2L5 1435 aa35.69■■■■□ 3.3
TVP23A-206ENST00000572980 MBD5Q9P267 1494 aa35.69■■■■□ 3.3
TVP23A-206ENST00000572980 FAM50AQ14320 339 aaKnown RBP35.68■■■■□ 3.3
TVP23A-206ENST00000572980 FRMPD1Q5SYB0 1578 aa35.67■■■■□ 3.3
TVP23A-206ENST00000572980 ARHGEF5Q12774 1597 aa35.62■■■■□ 3.29
TVP23A-206ENST00000572980 RRBP1Q9P2E9 1410 aaKnown RBP35.62■■■■□ 3.29
TVP23A-206ENST00000572980 CCDC141Q6ZP82 1450 aa35.61■■■■□ 3.29
TVP23A-206ENST00000572980 KDM5CP41229 1560 aa35.6■■■■□ 3.29
TVP23A-206ENST00000572980 ZMYM4Q5VZL5 1548 aa35.59■■■■□ 3.29
TVP23A-206ENST00000572980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.59■■■■□ 3.29
TVP23A-206ENST00000572980 TSPY4P0CV99 314 aa35.58■■■■□ 3.29
TVP23A-206ENST00000572980 TSPY10P0CW01 314 aa35.58■■■■□ 3.29
TVP23A-206ENST00000572980 MYT1LQ9UL68 1186 aa35.58■■■■□ 3.29
TVP23A-206ENST00000572980 SPAG9O60271 1321 aaKnown RBP35.57■■■■□ 3.28
TVP23A-206ENST00000572980 MAGI2Q86UL8 1455 aa35.56■■■■□ 3.28
TVP23A-206ENST00000572980 MLH3Q9UHC1 1453 aa35.54■■■■□ 3.28
TVP23A-206ENST00000572980 HECW2Q9P2P5 1572 aa35.52■■■■□ 3.28
TVP23A-206ENST00000572980 DNMT1P26358 1616 aaKnown RBP35.51■■■■□ 3.28
TVP23A-206ENST00000572980 ABCC5O15440 1437 aa35.51■■■■□ 3.27
TVP23A-206ENST00000572980 DAPK1P53355 1430 aa35.51■■■■□ 3.27
TVP23A-206ENST00000572980 ZFYVE16Q7Z3T8 1539 aa35.47■■■■□ 3.27
TVP23A-206ENST00000572980 RTEL1-TNFRSF6BF6WH68 1400 aa35.47■■■■□ 3.27
TVP23A-206ENST00000572980 ATP7AQ04656 1500 aa35.44■■■■□ 3.26
TVP23A-206ENST00000572980 YEATS2Q9ULM3 1422 aa35.44■■■■□ 3.26
TVP23A-206ENST00000572980 KIDINS220Q9ULH0 1771 aa35.44■■■■□ 3.26
TVP23A-206ENST00000572980 INO80Q9ULG1 1556 aaPredicted RBP35.43■■■■□ 3.26
TVP23A-206ENST00000572980 SHANK2Q9UPX8 1470 aa35.43■■■■□ 3.26
TVP23A-206ENST00000572980 C9orf84Q5VXU9 1444 aa35.43■■■■□ 3.26
TVP23A-206ENST00000572980 CROCC2H7BZ55 1655 aa35.42■■■■□ 3.26
TVP23A-206ENST00000572980 MAST1Q9Y2H9 1570 aa35.41■■■■□ 3.26
TVP23A-206ENST00000572980 ARHGEF40Q8TER5 1519 aa35.4■■■■□ 3.26
TVP23A-206ENST00000572980 ITGAEP38570 1179 aa35.4■■■■□ 3.26
TVP23A-206ENST00000572980 CHIC2Q9UKJ5 165 aa35.36■■■■□ 3.25
TVP23A-206ENST00000572980 ATP10AO60312 1499 aa35.36■■■■□ 3.25
TVP23A-206ENST00000572980 DIP2CQ9Y2E4 1556 aa35.34■■■■□ 3.25
TVP23A-206ENST00000572980 ABCA6Q8N139 1617 aa35.34■■■■□ 3.25
TVP23A-206ENST00000572980 PTPRKQ15262 1439 aa35.31■■■■□ 3.24
TVP23A-206ENST00000572980 ANKRD30AQ9BXX3 1397 aa35.3■■■■□ 3.24
TVP23A-206ENST00000572980 PLXNC1O60486 1568 aa35.28■■■■□ 3.24
TVP23A-206ENST00000572980 ADGBQ8N7X0 1667 aa35.27■■■■□ 3.24
TVP23A-206ENST00000572980 ADGRL2O95490 1459 aa35.26■■■■□ 3.24
TVP23A-206ENST00000572980 NCOA1Q15788 1441 aa35.25■■■■□ 3.23
TVP23A-206ENST00000572980 A2MP01023 1474 aa35.25■■■■□ 3.23
TVP23A-206ENST00000572980 RRP7BPQ9NSQ0 103 aa35.25■■■■□ 3.23
TVP23A-206ENST00000572980 REREQ9P2R6 1566 aa35.24■■■■□ 3.23
TVP23A-206ENST00000572980 ROCK1Q13464 1354 aa35.24■■■■□ 3.23
TVP23A-206ENST00000572980 KIF15Q9NS87 1388 aa35.22■■■■□ 3.23
TVP23A-206ENST00000572980 DHX29Q7Z478 1369 aaKnown RBP35.21■■■■□ 3.23
TVP23A-206ENST00000572980 ARID4BQ4LE39 1312 aaPredicted RBP35.2■■■■□ 3.23
TVP23A-206ENST00000572980 DUOX2Q9NRD8 1548 aa35.17■■■■□ 3.22
TVP23A-206ENST00000572980 AGLP35573 1532 aa35.13■■■■□ 3.21
TVP23A-206ENST00000572980 SIGLEC1Q9BZZ2 1709 aa35.11■■■■□ 3.21
TVP23A-206ENST00000572980 TRIM26Q12899 539 aaPredicted RBP35.09■■■■□ 3.21
TVP23A-206ENST00000572980 ERBINQ96RT1 1412 aa35.08■■■■□ 3.21
TVP23A-206ENST00000572980 KIF3BO15066 747 aa35.06■■■■□ 3.2
TVP23A-206ENST00000572980 ANKRD50Q9ULJ7 1429 aa35.05■■■■□ 3.2
TVP23A-206ENST00000572980 MLECQ14165 292 aa35.03■■■■□ 3.2
TVP23A-206ENST00000572980 EIF2AK4Q9P2K8 1649 aaKnown RBP35.02■■■■□ 3.2
TVP23A-206ENST00000572980 HFM1A2PYH4 1435 aa35.01■■■■□ 3.2
TVP23A-206ENST00000572980 NAIPQ13075 1403 aa35■■■■□ 3.19
TVP23A-206ENST00000572980 BCORL1Q5H9F3 1711 aa34.99■■■■□ 3.19
TVP23A-206ENST00000572980 GGT6Q6P531 493 aa34.99■■■■□ 3.19
TVP23A-206ENST00000572980 GCC2Q8IWJ2 1684 aa34.95■■■■□ 3.19
TVP23A-206ENST00000572980 PPP6R1Q9UPN7 881 aa34.91■■■■□ 3.18
TVP23A-206ENST00000572980 RNF17Q9BXT8 1623 aaKnown RBP34.9■■■■□ 3.18
TVP23A-206ENST00000572980 ESF1Q9H501 851 aaKnown RBP34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms