RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-205ENST00000571562 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
NPLOC4-205ENST00000571562 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
NPLOC4-205ENST00000571562 PPP1R15BQ5SWA1 713 aa9.36□□□□□ -0.91
NPLOC4-205ENST00000571562 SEC24BO95487 1268 aa9.35□□□□□ -0.91
NPLOC4-205ENST00000571562 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-205ENST00000571562 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
NPLOC4-205ENST00000571562 DSG2Q14126 1118 aa9.34□□□□□ -0.91
NPLOC4-205ENST00000571562 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
NPLOC4-205ENST00000571562 TMEM121BQ9BXQ6 578 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-205ENST00000571562 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-205ENST00000571562 G3V3G9 751 aa9.33□□□□□ -0.92
NPLOC4-205ENST00000571562 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
NPLOC4-205ENST00000571562 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
NPLOC4-205ENST00000571562 C2orf72A6NCS6 295 aa9.31□□□□□ -0.92
NPLOC4-205ENST00000571562 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
NPLOC4-205ENST00000571562 SEMA3EO15041 775 aa9.3□□□□□ -0.92
NPLOC4-205ENST00000571562 KIF3CO14782 793 aa9.29□□□□□ -0.92
NPLOC4-205ENST00000571562 C7P10643 843 aa9.28□□□□□ -0.92
NPLOC4-205ENST00000571562 FOXK1P85037 733 aa9.28□□□□□ -0.92
NPLOC4-205ENST00000571562 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-205ENST00000571562 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
NPLOC4-205ENST00000571562 LMOD2Q6P5Q4 547 aa9.27□□□□□ -0.93
NPLOC4-205ENST00000571562 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-205ENST00000571562 DPYSL4O14531 572 aa9.26□□□□□ -0.93
NPLOC4-205ENST00000571562 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-205ENST00000571562 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
NPLOC4-205ENST00000571562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPLOC4-205ENST00000571562 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
NPLOC4-205ENST00000571562 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPLOC4-205ENST00000571562 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-205ENST00000571562 TULP1O00294 542 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-205ENST00000571562 PDIA6Q15084 440 aa9.18□□□□□ -0.94
NPLOC4-205ENST00000571562 OXER1Q8TDS5 423 aa9.13□□□□□ -0.95
NPLOC4-205ENST00000571562 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-205ENST00000571562 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-205ENST00000571562 ZC3H15Q8WU90 426 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-205ENST00000571562 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
NPLOC4-205ENST00000571562 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
NPLOC4-205ENST00000571562 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-205ENST00000571562 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
NPLOC4-205ENST00000571562 SMYD5Q6GMV2 418 aa9.1□□□□□ -0.95
NPLOC4-205ENST00000571562 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
NPLOC4-205ENST00000571562 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
NPLOC4-205ENST00000571562 DDX12PQ92771 950 aa9.06□□□□□ -0.96
NPLOC4-205ENST00000571562 EVI5O60447 810 aa9.05□□□□□ -0.96
NPLOC4-205ENST00000571562 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-205ENST00000571562 GPR37O15354 613 aa9.02□□□□□ -0.97
NPLOC4-205ENST00000571562 SLC34A2O95436 690 aa9.02□□□□□ -0.97
NPLOC4-205ENST00000571562 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-205ENST00000571562 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-205ENST00000571562 ZMYND10O75800 440 aa9.01□□□□□ -0.97
NPLOC4-205ENST00000571562 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
NPLOC4-205ENST00000571562 TBC1D12O60347 775 aa9□□□□□ -0.97
NPLOC4-205ENST00000571562 SLAIN1Q8ND83 568 aa9□□□□□ -0.97
NPLOC4-205ENST00000571562 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
NPLOC4-205ENST00000571562 OSBPP22059 807 aa8.99□□□□□ -0.97
NPLOC4-205ENST00000571562 PTGER2P43116 358 aa8.98□□□□□ -0.97
NPLOC4-205ENST00000571562 SCUBE2Q9NQ36 999 aa8.98□□□□□ -0.97
NPLOC4-205ENST00000571562 NUTM2FA1L443 756 aa8.97□□□□□ -0.97
NPLOC4-205ENST00000571562 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-205ENST00000571562 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
NPLOC4-205ENST00000571562 KHSRPQ92945 711 aaKnown RBP eCLIP8.96□□□□□ -0.98
NPLOC4-205ENST00000571562 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-205ENST00000571562 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
NPLOC4-205ENST00000571562 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
NPLOC4-205ENST00000571562 NUDT7P0C024 238 aa8.93□□□□□ -0.98
NPLOC4-205ENST00000571562 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
NPLOC4-205ENST00000571562 ANO8Q9HCE9 1232 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-205ENST00000571562 MAMSTRQ6ZN01 415 aa8.92□□□□□ -0.98
NPLOC4-205ENST00000571562 EN1Q05925 392 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-205ENST00000571562 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
NPLOC4-205ENST00000571562 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-205ENST00000571562 PCDHGA10Q9Y5H3 936 aa8.91□□□□□ -0.98
NPLOC4-205ENST00000571562 MAP3K7O43318 606 aa8.9□□□□□ -0.98
NPLOC4-205ENST00000571562 PHF14O94880 888 aa8.9□□□□□ -0.98
NPLOC4-205ENST00000571562 FECHP22830 423 aa8.89□□□□□ -0.99
NPLOC4-205ENST00000571562 NEUROD2Q15784 382 aa8.89□□□□□ -0.99
NPLOC4-205ENST00000571562 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-205ENST00000571562 JPH4Q96JJ6 628 aa8.89□□□□□ -0.99
NPLOC4-205ENST00000571562 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
NPLOC4-205ENST00000571562 PTGDRQ13258 359 aa8.88□□□□□ -0.99
NPLOC4-205ENST00000571562 KRI1Q8N9T8 703 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-205ENST00000571562 GNPATO15228 680 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 FCHSD2O94868 740 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 TYW1BQ6NUM6 668 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 EPAS1Q99814 870 aa8.87□□□□□ -0.99
NPLOC4-205ENST00000571562 FOSBP53539 338 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 MAP2K5Q13163 448 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 HIC1Q14526 733 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 ZNF710Q8N1W2 664 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 OTUD5Q96G74 571 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 AK7Q96M32 723 aa8.86□□□□□ -0.99
NPLOC4-205ENST00000571562 GPBP1L1Q9HC44 474 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-205ENST00000571562 ZSWIM6Q9HCJ5 1215 aa8.85□□□□□ -0.99
NPLOC4-205ENST00000571562 TRIM66O15016 1216 aa8.83□□□□□ -1
NPLOC4-205ENST00000571562 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms