RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
RAB40B-204ENST00000571554 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
RAB40B-204ENST00000571554 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
RAB40B-204ENST00000571554 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
RAB40B-204ENST00000571554 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
RAB40B-204ENST00000571554 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
RAB40B-204ENST00000571554 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
RAB40B-204ENST00000571554 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
RAB40B-204ENST00000571554 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
RAB40B-204ENST00000571554 MADDQ8WXG6 1647 aa22.2■■□□□ 1.14
RAB40B-204ENST00000571554 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
RAB40B-204ENST00000571554 PREX2Q70Z35 1606 aa22.19■■□□□ 1.14
RAB40B-204ENST00000571554 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
RAB40B-204ENST00000571554 PTPRMP28827 1452 aa22.16■■□□□ 1.14
RAB40B-204ENST00000571554 MAGI2Q86UL8 1455 aa22.15■■□□□ 1.14
RAB40B-204ENST00000571554 RIMS1Q86UR5 1692 aaKnown RBP22.14■■□□□ 1.14
RAB40B-204ENST00000571554 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
RAB40B-204ENST00000571554 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
RAB40B-204ENST00000571554 ZNF518AQ6AHZ1 1483 aa22.12■■□□□ 1.13
RAB40B-204ENST00000571554 MLECQ14165 292 aa22.12■■□□□ 1.13
RAB40B-204ENST00000571554 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
RAB40B-204ENST00000571554 ABCC1P33527 1531 aa22.11■■□□□ 1.13
RAB40B-204ENST00000571554 KDM5CP41229 1560 aa22.1■■□□□ 1.13
RAB40B-204ENST00000571554 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
RAB40B-204ENST00000571554 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
RAB40B-204ENST00000571554 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
RAB40B-204ENST00000571554 ZNF777Q9ULD5 760 aaPredicted RBP22.09■■□□□ 1.13
RAB40B-204ENST00000571554 TRAPPC8Q9Y2L5 1435 aa22.08■■□□□ 1.13
RAB40B-204ENST00000571554 ATP10AO60312 1499 aa22.08■■□□□ 1.12
RAB40B-204ENST00000571554 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
RAB40B-204ENST00000571554 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
RAB40B-204ENST00000571554 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
RAB40B-204ENST00000571554 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
RAB40B-204ENST00000571554 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
RAB40B-204ENST00000571554 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
RAB40B-204ENST00000571554 FER1L4A9Z1Z3 1794 aa22.04■■□□□ 1.12
RAB40B-204ENST00000571554 SYCP2Q9BX26 1530 aa22.02■■□□□ 1.12
RAB40B-204ENST00000571554 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
RAB40B-204ENST00000571554 EHBP1L1Q8N3D4 1523 aa22.01■■□□□ 1.11
RAB40B-204ENST00000571554 MLH3Q9UHC1 1453 aa21.99■■□□□ 1.11
RAB40B-204ENST00000571554 KIDINS220Q9ULH0 1771 aa21.98■■□□□ 1.11
RAB40B-204ENST00000571554 HNRNPMP52272 730 aaKnown RBP eCLIP21.98■■□□□ 1.11
RAB40B-204ENST00000571554 CFDP1Q9UEE9 299 aaPredicted RBP21.98■■□□□ 1.11
RAB40B-204ENST00000571554 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
RAB40B-204ENST00000571554 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
RAB40B-204ENST00000571554 REREQ9P2R6 1566 aa21.92■■□□□ 1.1
RAB40B-204ENST00000571554 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
RAB40B-204ENST00000571554 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
RAB40B-204ENST00000571554 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
RAB40B-204ENST00000571554 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
RAB40B-204ENST00000571554 PLEKHH2Q8IVE3 1493 aa21.89■■□□□ 1.09
RAB40B-204ENST00000571554 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.09
RAB40B-204ENST00000571554 NCOA2Q15596 1464 aa21.88■■□□□ 1.09
RAB40B-204ENST00000571554 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
RAB40B-204ENST00000571554 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
RAB40B-204ENST00000571554 HSPA2P54652 639 aa21.87■■□□□ 1.09
RAB40B-204ENST00000571554 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
RAB40B-204ENST00000571554 AGLP35573 1532 aa21.85■■□□□ 1.09
RAB40B-204ENST00000571554 LRRC9Q6ZRR7 1453 aa21.81■■□□□ 1.08
RAB40B-204ENST00000571554 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
RAB40B-204ENST00000571554 C3P01024 1663 aa21.8■■□□□ 1.08
RAB40B-204ENST00000571554 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
RAB40B-204ENST00000571554 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
RAB40B-204ENST00000571554 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
RAB40B-204ENST00000571554 PREX1Q8TCU6 1659 aa21.79■■□□□ 1.08
RAB40B-204ENST00000571554 A2MP01023 1474 aa21.77■■□□□ 1.08
RAB40B-204ENST00000571554 ILDR1Q86SU0 546 aaPredicted RBP21.77■■□□□ 1.08
RAB40B-204ENST00000571554 PLXNC1O60486 1568 aa21.77■■□□□ 1.08
RAB40B-204ENST00000571554 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
RAB40B-204ENST00000571554 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
RAB40B-204ENST00000571554 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
RAB40B-204ENST00000571554 GGT6Q6P531 493 aa21.71■■□□□ 1.07
RAB40B-204ENST00000571554 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
RAB40B-204ENST00000571554 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
RAB40B-204ENST00000571554 CNTLNQ9NXG0 1405 aa21.7■■□□□ 1.06
RAB40B-204ENST00000571554 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
RAB40B-204ENST00000571554 MROH2AA6NES4 1674 aa21.67■■□□□ 1.06
RAB40B-204ENST00000571554 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
RAB40B-204ENST00000571554 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
RAB40B-204ENST00000571554 MYOM3Q5VTT5 1437 aa21.64■■□□□ 1.06
RAB40B-204ENST00000571554 ZMYM3Q14202 1370 aa21.64■■□□□ 1.06
RAB40B-204ENST00000571554 APLP2Q06481 763 aa21.64■■□□□ 1.05
RAB40B-204ENST00000571554 DHX29Q7Z478 1369 aaKnown RBP21.63■■□□□ 1.05
RAB40B-204ENST00000571554 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
RAB40B-204ENST00000571554 RSPH4AQ5TD94 716 aa21.61■■□□□ 1.05
RAB40B-204ENST00000571554 KIF3BO15066 747 aa21.6■■□□□ 1.05
RAB40B-204ENST00000571554 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
RAB40B-204ENST00000571554 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
RAB40B-204ENST00000571554 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
RAB40B-204ENST00000571554 NPATQ14207 1427 aa21.56■■□□□ 1.04
RAB40B-204ENST00000571554 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
RAB40B-204ENST00000571554 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
RAB40B-204ENST00000571554 MYO3AQ8NEV4 1616 aa21.55■■□□□ 1.04
RAB40B-204ENST00000571554 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
RAB40B-204ENST00000571554 KDM5DQ9BY66 1539 aa21.51■■□□□ 1.03
RAB40B-204ENST00000571554 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
RAB40B-204ENST00000571554 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
RAB40B-204ENST00000571554 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
RAB40B-204ENST00000571554 CROCC2H7BZ55 1655 aa21.5■■□□□ 1.03
RAB40B-204ENST00000571554 FGD6Q6ZV73 1430 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms