RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
CTDNEP1-204ENST00000570484 ZCCHC11Q5TAX3 1644 aaKnown RBP10.21□□□□□ -0.78
CTDNEP1-204ENST00000570484 ATP10BO94823 1461 aa10.2□□□□□ -0.78
CTDNEP1-204ENST00000570484 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
CTDNEP1-204ENST00000570484 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
CTDNEP1-204ENST00000570484 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-204ENST00000570484 KIF14Q15058 1648 aa10.18□□□□□ -0.78
CTDNEP1-204ENST00000570484 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-204ENST00000570484 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
CTDNEP1-204ENST00000570484 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
CTDNEP1-204ENST00000570484 PLEKHD1A6NEE1 506 aa10.17□□□□□ -0.78
CTDNEP1-204ENST00000570484 MAPKBP1O60336 1514 aa10.16□□□□□ -0.78
CTDNEP1-204ENST00000570484 SUPT6HQ7KZ85 1726 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-204ENST00000570484 ASXL2Q76L83 1435 aa10.15□□□□□ -0.79
CTDNEP1-204ENST00000570484 MAGI3Q5TCQ9 1506 aa10.14□□□□□ -0.79
CTDNEP1-204ENST00000570484 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-204ENST00000570484 NCOA2Q15596 1464 aa10.13□□□□□ -0.79
CTDNEP1-204ENST00000570484 KANK4Q5T7N3 995 aaPredicted RBP10.13□□□□□ -0.79
CTDNEP1-204ENST00000570484 FKBP8Q14318 412 aa10.12□□□□□ -0.79
CTDNEP1-204ENST00000570484 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
CTDNEP1-204ENST00000570484 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
CTDNEP1-204ENST00000570484 ITSN2Q9NZM3 1697 aa10.09□□□□□ -0.79
CTDNEP1-204ENST00000570484 MYOM3Q5VTT5 1437 aa10.08□□□□□ -0.8
CTDNEP1-204ENST00000570484 TTC37Q6PGP7 1564 aa10.08□□□□□ -0.8
CTDNEP1-204ENST00000570484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTDNEP1-204ENST00000570484 DIP2BQ9P265 1576 aa10.06□□□□□ -0.8
CTDNEP1-204ENST00000570484 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
CTDNEP1-204ENST00000570484 PHLDB1Q86UU1 1377 aa10.06□□□□□ -0.8
CTDNEP1-204ENST00000570484 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
CTDNEP1-204ENST00000570484 ARHGAP5Q13017 1502 aa10.06□□□□□ -0.8
CTDNEP1-204ENST00000570484 PREX2Q70Z35 1606 aa10.05□□□□□ -0.8
CTDNEP1-204ENST00000570484 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
CTDNEP1-204ENST00000570484 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
CTDNEP1-204ENST00000570484 GLI2P10070 1586 aa10.04□□□□□ -0.8
CTDNEP1-204ENST00000570484 MYO5CQ9NQX4 1742 aa10.04□□□□□ -0.8
CTDNEP1-204ENST00000570484 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
CTDNEP1-204ENST00000570484 PROM2Q8N271 834 aa10.03□□□□□ -0.8
CTDNEP1-204ENST00000570484 CFAP74Q9C0B2 1584 aa10.03□□□□□ -0.8
CTDNEP1-204ENST00000570484 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-204ENST00000570484 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.8
CTDNEP1-204ENST00000570484 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.8
CTDNEP1-204ENST00000570484 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-204ENST00000570484 SPDYE4A6NLX3 237 aa10.02□□□□□ -0.81
CTDNEP1-204ENST00000570484 FAM69CQ0P6D2 419 aa10.02□□□□□ -0.81
CTDNEP1-204ENST00000570484 PLCH2O75038 1416 aa10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 PTPN23Q9H3S7 1636 aa10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 FANCAO15360 1455 aa10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 CAMSAP2Q08AD1 1489 aa10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
CTDNEP1-204ENST00000570484 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
CTDNEP1-204ENST00000570484 PLEKHH2Q8IVE3 1493 aa10□□□□□ -0.81
CTDNEP1-204ENST00000570484 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
CTDNEP1-204ENST00000570484 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
CTDNEP1-204ENST00000570484 EFCAB2Q5VUJ9 269 aa9.99□□□□□ -0.81
CTDNEP1-204ENST00000570484 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
CTDNEP1-204ENST00000570484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 NEO1Q92859 1461 aa9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 ABCC1P33527 1531 aa9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
CTDNEP1-204ENST00000570484 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
CTDNEP1-204ENST00000570484 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
CTDNEP1-204ENST00000570484 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
CTDNEP1-204ENST00000570484 CCDC141Q6ZP82 1450 aa9.95□□□□□ -0.82
CTDNEP1-204ENST00000570484 CDC42BPBQ9Y5S2 1711 aa9.95□□□□□ -0.82
CTDNEP1-204ENST00000570484 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
CTDNEP1-204ENST00000570484 KIAA1107Q9UPP5 1409 aa9.94□□□□□ -0.82
CTDNEP1-204ENST00000570484 ITGAEP38570 1179 aa9.94□□□□□ -0.82
CTDNEP1-204ENST00000570484 KIF13AQ9H1H9 1805 aa9.93□□□□□ -0.82
CTDNEP1-204ENST00000570484 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-204ENST00000570484 ARHGEF5Q12774 1597 aa9.93□□□□□ -0.82
CTDNEP1-204ENST00000570484 DAPK1P53355 1430 aa9.93□□□□□ -0.82
CTDNEP1-204ENST00000570484 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-204ENST00000570484 ZNF518AQ6AHZ1 1483 aa9.92□□□□□ -0.82
CTDNEP1-204ENST00000570484 SHANK2Q9UPX8 1470 aa9.92□□□□□ -0.82
CTDNEP1-204ENST00000570484 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
CTDNEP1-204ENST00000570484 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
CTDNEP1-204ENST00000570484 POGZQ7Z3K3 1410 aa9.91□□□□□ -0.82
CTDNEP1-204ENST00000570484 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-204ENST00000570484 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.82
CTDNEP1-204ENST00000570484 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
CTDNEP1-204ENST00000570484 C9orf84Q5VXU9 1444 aa9.9□□□□□ -0.83
CTDNEP1-204ENST00000570484 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.83
CTDNEP1-204ENST00000570484 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.83
CTDNEP1-204ENST00000570484 TSPY4P0CV99 314 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 TSPY10P0CW01 314 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 ABCC5O15440 1437 aa9.89□□□□□ -0.83
CTDNEP1-204ENST00000570484 ARHGEF12Q9NZN5 1544 aa9.88□□□□□ -0.83
CTDNEP1-204ENST00000570484 TRAPPC8Q9Y2L5 1435 aa9.88□□□□□ -0.83
CTDNEP1-204ENST00000570484 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
CTDNEP1-204ENST00000570484 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-204ENST00000570484 HECW2Q9P2P5 1572 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms