RNA–Protein interactions for RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 ARHGAP5Q13017 1502 aa36.54■■■■□ 3.44
TRAP1-203ENST00000570403 CDC42BPAQ5VT25 1732 aa36.51■■■■□ 3.44
TRAP1-203ENST00000570403 POGZQ7Z3K3 1410 aa36.5■■■■□ 3.43
TRAP1-203ENST00000570403 SCAPERQ9BY12 1400 aa36.5■■■■□ 3.43
TRAP1-203ENST00000570403 LOC105371045A0A1W2PR82 267 aa36.49■■■■□ 3.43
TRAP1-203ENST00000570403 EFCAB2Q5VUJ9 269 aa36.48■■■■□ 3.43
TRAP1-203ENST00000570403 ZFYVE16Q7Z3T8 1539 aa36.43■■■■□ 3.42
TRAP1-203ENST00000570403 MAGI2Q86UL8 1455 aa36.41■■■■□ 3.42
TRAP1-203ENST00000570403 BCORL1Q5H9F3 1711 aa36.38■■■■□ 3.41
TRAP1-203ENST00000570403 YEATS2Q9ULM3 1422 aa36.38■■■■□ 3.41
TRAP1-203ENST00000570403 ADAMTSL3P82987 1691 aa36.38■■■■□ 3.41
TRAP1-203ENST00000570403 ABCC1P33527 1531 aa36.37■■■■□ 3.41
TRAP1-203ENST00000570403 KDM5CP41229 1560 aa36.36■■■■□ 3.41
TRAP1-203ENST00000570403 SIGLEC1Q9BZZ2 1709 aa36.36■■■■□ 3.41
TRAP1-203ENST00000570403 ZNF518AQ6AHZ1 1483 aa36.36■■■■□ 3.41
TRAP1-203ENST00000570403 ITSN2Q9NZM3 1697 aa36.35■■■■□ 3.41
TRAP1-203ENST00000570403 EHBP1L1Q8N3D4 1523 aa36.33■■■■□ 3.41
TRAP1-203ENST00000570403 MTUS2Q5JR59 1369 aa36.32■■■■□ 3.4
TRAP1-203ENST00000570403 GPATCH8Q9UKJ3 1502 aaKnown RBP36.3■■■■□ 3.4
TRAP1-203ENST00000570403 VPS8Q8N3P4 1428 aa36.28■■■■□ 3.4
TRAP1-203ENST00000570403 ARHGEF12Q9NZN5 1544 aa36.28■■■■□ 3.4
TRAP1-203ENST00000570403 SAMD9LQ8IVG5 1584 aa36.27■■■■□ 3.4
TRAP1-203ENST00000570403 HECW2Q9P2P5 1572 aa36.27■■■■□ 3.4
TRAP1-203ENST00000570403 MADDQ8WXG6 1647 aa36.24■■■■□ 3.39
TRAP1-203ENST00000570403 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
TRAP1-203ENST00000570403 ARID4BQ4LE39 1312 aaPredicted RBP36.22■■■■□ 3.39
TRAP1-203ENST00000570403 AFAP1Q8N556 730 aa36.21■■■■□ 3.39
TRAP1-203ENST00000570403 TRAPPC8Q9Y2L5 1435 aa36.21■■■■□ 3.39
TRAP1-203ENST00000570403 ATP10AO60312 1499 aa36.18■■■■□ 3.38
TRAP1-203ENST00000570403 CCNB3Q8WWL7 1395 aa36.18■■■■□ 3.38
TRAP1-203ENST00000570403 DIP2CQ9Y2E4 1556 aa36.18■■■■□ 3.38
TRAP1-203ENST00000570403 SYCP2Q9BX26 1530 aa36.18■■■■□ 3.38
TRAP1-203ENST00000570403 C9orf84Q5VXU9 1444 aa36.17■■■■□ 3.38
TRAP1-203ENST00000570403 ABCA6Q8N139 1617 aa36.16■■■■□ 3.38
TRAP1-203ENST00000570403 MLH3Q9UHC1 1453 aa36.16■■■■□ 3.38
TRAP1-203ENST00000570403 SUPT6HQ7KZ85 1726 aaKnown RBP36.15■■■■□ 3.38
TRAP1-203ENST00000570403 PTPRMP28827 1452 aa36.15■■■■□ 3.38
TRAP1-203ENST00000570403 RIMS1Q86UR5 1692 aaKnown RBP36.13■■■■□ 3.37
TRAP1-203ENST00000570403 KIDINS220Q9ULH0 1771 aa36.12■■■■□ 3.37
TRAP1-203ENST00000570403 ZNF777Q9ULD5 760 aaPredicted RBP36.1■■■■□ 3.37
TRAP1-203ENST00000570403 REREQ9P2R6 1566 aa36.1■■■■□ 3.37
TRAP1-203ENST00000570403 CFDP1Q9UEE9 299 aaPredicted RBP36.09■■■■□ 3.37
TRAP1-203ENST00000570403 FER1L4A9Z1Z3 1794 aa36.07■■■■□ 3.37
TRAP1-203ENST00000570403 PLEKHH2Q8IVE3 1493 aa36.07■■■■□ 3.37
TRAP1-203ENST00000570403 KIAA1107Q9UPP5 1409 aa36.07■■■■□ 3.36
TRAP1-203ENST00000570403 NCOA2Q15596 1464 aa36.06■■■■□ 3.36
TRAP1-203ENST00000570403 MAP3K1Q13233 1512 aa36.05■■■■□ 3.36
TRAP1-203ENST00000570403 LRRC9Q6ZRR7 1453 aa36.03■■■■□ 3.36
TRAP1-203ENST00000570403 MYT1LQ9UL68 1186 aa36■■■■□ 3.35
TRAP1-203ENST00000570403 INO80Q9ULG1 1556 aaPredicted RBP35.99■■■■□ 3.35
TRAP1-203ENST00000570403 HNRNPMP52272 730 aaKnown RBP eCLIP35.98■■■■□ 3.354e-7■■■■■ 27
TRAP1-203ENST00000570403 ATP7AQ04656 1500 aa35.95■■■■□ 3.35
TRAP1-203ENST00000570403 AGLP35573 1532 aa35.94■■■■□ 3.34
TRAP1-203ENST00000570403 MLECQ14165 292 aa35.94■■■■□ 3.34
TRAP1-203ENST00000570403 ZNF644Q9H582 1327 aaPredicted RBP35.93■■■■□ 3.34
TRAP1-203ENST00000570403 MBD5Q9P267 1494 aa35.92■■■■□ 3.34
TRAP1-203ENST00000570403 SPAG9O60271 1321 aaKnown RBP35.89■■■■□ 3.34
TRAP1-203ENST00000570403 CAMSAP2Q08AD1 1489 aa35.88■■■■□ 3.33
TRAP1-203ENST00000570403 KANK4Q5T7N3 995 aaPredicted RBP35.86■■■■□ 3.33
TRAP1-203ENST00000570403 PLXNC1O60486 1568 aa35.84■■■■□ 3.33
TRAP1-203ENST00000570403 ADGBQ8N7X0 1667 aa35.81■■■■□ 3.32
TRAP1-203ENST00000570403 CCDC141Q6ZP82 1450 aa35.78■■■■□ 3.32
TRAP1-203ENST00000570403 LMTK3Q96Q04 1460 aa35.77■■■■□ 3.32
TRAP1-203ENST00000570403 ARHGEF5Q12774 1597 aa35.76■■■■□ 3.32
TRAP1-203ENST00000570403 A2MP01023 1474 aa35.75■■■■□ 3.31
TRAP1-203ENST00000570403 RTEL1-TNFRSF6BF6WH68 1400 aa35.74■■■■□ 3.31
TRAP1-203ENST00000570403 MYOM3Q5VTT5 1437 aa35.73■■■■□ 3.31
TRAP1-203ENST00000570403 C3P01024 1663 aa35.71■■■■□ 3.31
TRAP1-203ENST00000570403 PLPPR3Q6T4P5 718 aa35.7■■■■□ 3.31
TRAP1-203ENST00000570403 MIA2Q96PC5 1412 aa35.67■■■■□ 3.3
TRAP1-203ENST00000570403 APLP2Q06481 763 aa35.66■■■■□ 3.3
TRAP1-203ENST00000570403 PREX1Q8TCU6 1659 aa35.65■■■■□ 3.3
TRAP1-203ENST00000570403 RSPH4AQ5TD94 716 aa35.64■■■■□ 3.3
TRAP1-203ENST00000570403 MROH2AA6NES4 1674 aa35.64■■■■□ 3.3
TRAP1-203ENST00000570403 CEBPAP49715 358 aaPredicted RBP35.61■■■■□ 3.29
TRAP1-203ENST00000570403 CNTLNQ9NXG0 1405 aa35.6■■■■□ 3.29
TRAP1-203ENST00000570403 MAST1Q9Y2H9 1570 aa35.59■■■■□ 3.29
TRAP1-203ENST00000570403 SETD1BQ9UPS6 1966 aaKnown RBP35.59■■■■□ 3.29
TRAP1-203ENST00000570403 CLTCQ00610 1675 aaKnown RBP35.57■■■■□ 3.28
TRAP1-203ENST00000570403 PTPN23Q9H3S7 1636 aa35.55■■■■□ 3.28
TRAP1-203ENST00000570403 DHX29Q7Z478 1369 aaKnown RBP35.54■■■■□ 3.28
TRAP1-203ENST00000570403 ESF1Q9H501 851 aaKnown RBP35.54■■■■□ 3.28
TRAP1-203ENST00000570403 CROCC2H7BZ55 1655 aa35.52■■■■□ 3.28
TRAP1-203ENST00000570403 TSPY4P0CV99 314 aa35.48■■■■□ 3.27
TRAP1-203ENST00000570403 TSPY10P0CW01 314 aa35.48■■■■□ 3.27
TRAP1-203ENST00000570403 FGD6Q6ZV73 1430 aa35.48■■■■□ 3.27
TRAP1-203ENST00000570403 HSPA2P54652 639 aa35.46■■■■□ 3.27
TRAP1-203ENST00000570403 GGT6Q6P531 493 aa35.45■■■■□ 3.27
TRAP1-203ENST00000570403 TCOF1Q13428 1488 aaKnown RBP35.45■■■■□ 3.27
TRAP1-203ENST00000570403 UHRF1BP1Q6BDS2 1440 aa35.43■■■■□ 3.26
TRAP1-203ENST00000570403 ZMYM3Q14202 1370 aa35.42■■■■□ 3.26
TRAP1-203ENST00000570403 DNMT1P26358 1616 aaKnown RBP35.42■■■■□ 3.26
TRAP1-203ENST00000570403 SHANK2Q9UPX8 1470 aa35.41■■■■□ 3.26
TRAP1-203ENST00000570403 NPATQ14207 1427 aa35.39■■■■□ 3.26
TRAP1-203ENST00000570403 FAM135AQ9P2D6 1515 aa35.38■■■■□ 3.25
TRAP1-203ENST00000570403 PPP6R1Q9UPN7 881 aa35.38■■■■□ 3.25
TRAP1-203ENST00000570403 EIF2AK4Q9P2K8 1649 aaKnown RBP35.38■■■■□ 3.25
TRAP1-203ENST00000570403 RNF17Q9BXT8 1623 aaKnown RBP35.37■■■■□ 3.25
TRAP1-203ENST00000570403 ABCC5O15440 1437 aa35.37■■■■□ 3.25
TRAP1-203ENST00000570403 KIF3BO15066 747 aa35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms