RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 BCORL1Q5H9F3 1711 aa27.76■■■□□ 2.03
MAP1LC3B-208ENST00000570189 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
MAP1LC3B-208ENST00000570189 EFCAB2Q5VUJ9 269 aa27.73■■■□□ 2.03
MAP1LC3B-208ENST00000570189 PREX2Q70Z35 1606 aa27.73■■■□□ 2.03
MAP1LC3B-208ENST00000570189 SCAPERQ9BY12 1400 aa27.73■■■□□ 2.03
MAP1LC3B-208ENST00000570189 ZFYVE16Q7Z3T8 1539 aa27.72■■■□□ 2.03
MAP1LC3B-208ENST00000570189 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
MAP1LC3B-208ENST00000570189 KDM5CP41229 1560 aa27.67■■■□□ 2.02
MAP1LC3B-208ENST00000570189 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
MAP1LC3B-208ENST00000570189 ZNF518AQ6AHZ1 1483 aa27.66■■■□□ 2.02
MAP1LC3B-208ENST00000570189 YEATS2Q9ULM3 1422 aa27.64■■■□□ 2.02
MAP1LC3B-208ENST00000570189 SIGLEC1Q9BZZ2 1709 aa27.63■■■□□ 2.01
MAP1LC3B-208ENST00000570189 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
MAP1LC3B-208ENST00000570189 MADDQ8WXG6 1647 aa27.61■■■□□ 2.01
MAP1LC3B-208ENST00000570189 PTPRMP28827 1452 aa27.61■■■□□ 2.01
MAP1LC3B-208ENST00000570189 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
MAP1LC3B-208ENST00000570189 ABCC1P33527 1531 aa27.6■■■□□ 2.01
MAP1LC3B-208ENST00000570189 ITSN2Q9NZM3 1697 aa27.58■■■□□ 2.01
MAP1LC3B-208ENST00000570189 ATP10AO60312 1499 aa27.57■■■□□ 2
MAP1LC3B-208ENST00000570189 ARID4BQ4LE39 1312 aaPredicted RBP27.54■■■□□ 2
MAP1LC3B-208ENST00000570189 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
MAP1LC3B-208ENST00000570189 REREQ9P2R6 1566 aa27.54■■■□□ 2
MAP1LC3B-208ENST00000570189 MLH3Q9UHC1 1453 aa27.53■■■□□ 2
MAP1LC3B-208ENST00000570189 ARHGEF12Q9NZN5 1544 aa27.51■■■□□ 2
MAP1LC3B-208ENST00000570189 GPATCH8Q9UKJ3 1502 aaKnown RBP27.51■■■□□ 2
MAP1LC3B-208ENST00000570189 RIMS1Q86UR5 1692 aaKnown RBP27.51■■□□□ 1.99
MAP1LC3B-208ENST00000570189 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
MAP1LC3B-208ENST00000570189 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
MAP1LC3B-208ENST00000570189 EHBP1L1Q8N3D4 1523 aa27.48■■□□□ 1.99
MAP1LC3B-208ENST00000570189 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
MAP1LC3B-208ENST00000570189 AFAP1Q8N556 730 aa27.47■■□□□ 1.99
MAP1LC3B-208ENST00000570189 TRAPPC8Q9Y2L5 1435 aa27.46■■□□□ 1.99
MAP1LC3B-208ENST00000570189 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
MAP1LC3B-208ENST00000570189 ABCA6Q8N139 1617 aa27.45■■□□□ 1.99
MAP1LC3B-208ENST00000570189 KIDINS220Q9ULH0 1771 aa27.44■■□□□ 1.98
MAP1LC3B-208ENST00000570189 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
MAP1LC3B-208ENST00000570189 PLEKHH2Q8IVE3 1493 aa27.42■■□□□ 1.98
MAP1LC3B-208ENST00000570189 AGLP35573 1532 aa27.41■■□□□ 1.98
MAP1LC3B-208ENST00000570189 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
MAP1LC3B-208ENST00000570189 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
MAP1LC3B-208ENST00000570189 SYCP2Q9BX26 1530 aa27.39■■□□□ 1.98
MAP1LC3B-208ENST00000570189 VPS8Q8N3P4 1428 aa27.35■■□□□ 1.97
MAP1LC3B-208ENST00000570189 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.97
MAP1LC3B-208ENST00000570189 LMTK3Q96Q04 1460 aa27.33■■□□□ 1.97
MAP1LC3B-208ENST00000570189 CFDP1Q9UEE9 299 aaPredicted RBP27.33■■□□□ 1.97
MAP1LC3B-208ENST00000570189 INO80Q9ULG1 1556 aaPredicted RBP27.32■■□□□ 1.96
MAP1LC3B-208ENST00000570189 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
MAP1LC3B-208ENST00000570189 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
MAP1LC3B-208ENST00000570189 ATP7AQ04656 1500 aa27.28■■□□□ 1.96
MAP1LC3B-208ENST00000570189 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
MAP1LC3B-208ENST00000570189 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
MAP1LC3B-208ENST00000570189 MLECQ14165 292 aa27.26■■□□□ 1.95
MAP1LC3B-208ENST00000570189 MYT1LQ9UL68 1186 aa27.25■■□□□ 1.95
MAP1LC3B-208ENST00000570189 PLXNC1O60486 1568 aa27.25■■□□□ 1.95
MAP1LC3B-208ENST00000570189 MBD5Q9P267 1494 aa27.25■■□□□ 1.95
MAP1LC3B-208ENST00000570189 HNRNPMP52272 730 aaKnown RBP eCLIP27.24■■□□□ 1.95
MAP1LC3B-208ENST00000570189 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
MAP1LC3B-208ENST00000570189 SETD1BQ9UPS6 1966 aaKnown RBP27.23■■□□□ 1.95
MAP1LC3B-208ENST00000570189 PREX1Q8TCU6 1659 aa27.22■■□□□ 1.95
MAP1LC3B-208ENST00000570189 ADGBQ8N7X0 1667 aa27.21■■□□□ 1.95
MAP1LC3B-208ENST00000570189 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
MAP1LC3B-208ENST00000570189 C3P01024 1663 aa27.18■■□□□ 1.94
MAP1LC3B-208ENST00000570189 RTEL1-TNFRSF6BF6WH68 1400 aa27.18■■□□□ 1.94
MAP1LC3B-208ENST00000570189 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
MAP1LC3B-208ENST00000570189 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
MAP1LC3B-208ENST00000570189 ZNF644Q9H582 1327 aaPredicted RBP27.15■■□□□ 1.94
MAP1LC3B-208ENST00000570189 A2MP01023 1474 aa27.14■■□□□ 1.94
MAP1LC3B-208ENST00000570189 CAMSAP2Q08AD1 1489 aa27.14■■□□□ 1.94
MAP1LC3B-208ENST00000570189 ARHGEF5Q12774 1597 aa27.13■■□□□ 1.93
MAP1LC3B-208ENST00000570189 CCDC141Q6ZP82 1450 aa27.12■■□□□ 1.93
MAP1LC3B-208ENST00000570189 RSPH4AQ5TD94 716 aa27.11■■□□□ 1.93
MAP1LC3B-208ENST00000570189 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
MAP1LC3B-208ENST00000570189 ESF1Q9H501 851 aaKnown RBP27.04■■□□□ 1.92
MAP1LC3B-208ENST00000570189 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
MAP1LC3B-208ENST00000570189 UHRF1BP1Q6BDS2 1440 aa27.03■■□□□ 1.92
MAP1LC3B-208ENST00000570189 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
MAP1LC3B-208ENST00000570189 PPP6R1Q9UPN7 881 aa27.03■■□□□ 1.92
MAP1LC3B-208ENST00000570189 NPATQ14207 1427 aa27.02■■□□□ 1.92
MAP1LC3B-208ENST00000570189 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
MAP1LC3B-208ENST00000570189 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
MAP1LC3B-208ENST00000570189 KANK4Q5T7N3 995 aaPredicted RBP27.01■■□□□ 1.91
MAP1LC3B-208ENST00000570189 CLTCQ00610 1675 aaKnown RBP27.01■■□□□ 1.91
MAP1LC3B-208ENST00000570189 MAST1Q9Y2H9 1570 aa27.01■■□□□ 1.91
MAP1LC3B-208ENST00000570189 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
MAP1LC3B-208ENST00000570189 HSPA2P54652 639 aa27■■□□□ 1.91
MAP1LC3B-208ENST00000570189 STRCQ7RTU9 1775 aa26.97■■□□□ 1.91
MAP1LC3B-208ENST00000570189 ZMYM3Q14202 1370 aa26.96■■□□□ 1.91
MAP1LC3B-208ENST00000570189 ILDR1Q86SU0 546 aaPredicted RBP26.93■■□□□ 1.9
MAP1LC3B-208ENST00000570189 ZNF142P52746 1687 aaPredicted RBP26.91■■□□□ 1.9
MAP1LC3B-208ENST00000570189 TSPY4P0CV99 314 aa26.89■■□□□ 1.9
MAP1LC3B-208ENST00000570189 TSPY10P0CW01 314 aa26.89■■□□□ 1.9
MAP1LC3B-208ENST00000570189 PTPRKQ15262 1439 aa26.88■■□□□ 1.89
MAP1LC3B-208ENST00000570189 EIF2AK4Q9P2K8 1649 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3B-208ENST00000570189 APLP2Q06481 763 aa26.87■■□□□ 1.89
MAP1LC3B-208ENST00000570189 GGT6Q6P531 493 aa26.87■■□□□ 1.89
MAP1LC3B-208ENST00000570189 RNF17Q9BXT8 1623 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3B-208ENST00000570189 CROCC2H7BZ55 1655 aa26.86■■□□□ 1.89
MAP1LC3B-208ENST00000570189 MYO3AQ8NEV4 1616 aa26.86■■□□□ 1.89
MAP1LC3B-208ENST00000570189 KDM5DQ9BY66 1539 aa26.85■■□□□ 1.89
MAP1LC3B-208ENST00000570189 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms