RNA–Protein interactions for RNA: ENST00000569747.5

KLHDC4-226, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-226ENST00000569747 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
KLHDC4-226ENST00000569747 CASKIN1Q8WXD9 1431 aa22.35■■□□□ 1.17
KLHDC4-226ENST00000569747 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
KLHDC4-226ENST00000569747 SCAPERQ9BY12 1400 aa22.34■■□□□ 1.17
KLHDC4-226ENST00000569747 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
KLHDC4-226ENST00000569747 CLIP1P30622 1438 aa22.33■■□□□ 1.17
KLHDC4-226ENST00000569747 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
KLHDC4-226ENST00000569747 ARID4BQ4LE39 1312 aaPredicted RBP22.31■■□□□ 1.16
KLHDC4-226ENST00000569747 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
KLHDC4-226ENST00000569747 RIMS1Q86UR5 1692 aaKnown RBP22.29■■□□□ 1.16
KLHDC4-226ENST00000569747 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
KLHDC4-226ENST00000569747 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
KLHDC4-226ENST00000569747 ARHGAP5Q13017 1502 aa22.28■■□□□ 1.16
KLHDC4-226ENST00000569747 PREX2Q70Z35 1606 aa22.27■■□□□ 1.16
KLHDC4-226ENST00000569747 KDM5CP41229 1560 aa22.26■■□□□ 1.15
KLHDC4-226ENST00000569747 ZNF518AQ6AHZ1 1483 aa22.24■■□□□ 1.15
KLHDC4-226ENST00000569747 ATP10AO60312 1499 aa22.22■■□□□ 1.15
KLHDC4-226ENST00000569747 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
KLHDC4-226ENST00000569747 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
KLHDC4-226ENST00000569747 FER1L4A9Z1Z3 1794 aa22.2■■□□□ 1.14
KLHDC4-226ENST00000569747 ABCC1P33527 1531 aa22.2■■□□□ 1.14
KLHDC4-226ENST00000569747 LMTK3Q96Q04 1460 aa22.18■■□□□ 1.14
KLHDC4-226ENST00000569747 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
KLHDC4-226ENST00000569747 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
KLHDC4-226ENST00000569747 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
KLHDC4-226ENST00000569747 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
KLHDC4-226ENST00000569747 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
KLHDC4-226ENST00000569747 AFAP1Q8N556 730 aa22.13■■□□□ 1.13
KLHDC4-226ENST00000569747 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
KLHDC4-226ENST00000569747 ILDR1Q86SU0 546 aaPredicted RBP22.11■■□□□ 1.13
KLHDC4-226ENST00000569747 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
KLHDC4-226ENST00000569747 MLECQ14165 292 aa22.09■■□□□ 1.13
KLHDC4-226ENST00000569747 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.13
KLHDC4-226ENST00000569747 GPATCH8Q9UKJ3 1502 aaKnown RBP22.08■■□□□ 1.13
KLHDC4-226ENST00000569747 KIDINS220Q9ULH0 1771 aa22.07■■□□□ 1.12
KLHDC4-226ENST00000569747 AGLP35573 1532 aa22.05■■□□□ 1.12
KLHDC4-226ENST00000569747 SYCP2Q9BX26 1530 aa22.04■■□□□ 1.12
KLHDC4-226ENST00000569747 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
KLHDC4-226ENST00000569747 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
KLHDC4-226ENST00000569747 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
KLHDC4-226ENST00000569747 EHBP1L1Q8N3D4 1523 aa22■■□□□ 1.11
KLHDC4-226ENST00000569747 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
KLHDC4-226ENST00000569747 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
KLHDC4-226ENST00000569747 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
KLHDC4-226ENST00000569747 PLEKHH2Q8IVE3 1493 aa21.98■■□□□ 1.11
KLHDC4-226ENST00000569747 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
KLHDC4-226ENST00000569747 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
KLHDC4-226ENST00000569747 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
KLHDC4-226ENST00000569747 HSPA2P54652 639 aa21.96■■□□□ 1.11
KLHDC4-226ENST00000569747 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
KLHDC4-226ENST00000569747 C3P01024 1663 aa21.95■■□□□ 1.1
KLHDC4-226ENST00000569747 ATP7AQ04656 1500 aa21.94■■□□□ 1.1
KLHDC4-226ENST00000569747 SETD1BQ9UPS6 1966 aaKnown RBP21.94■■□□□ 1.1
KLHDC4-226ENST00000569747 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
KLHDC4-226ENST00000569747 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
KLHDC4-226ENST00000569747 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
KLHDC4-226ENST00000569747 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
KLHDC4-226ENST00000569747 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.16e-7■■■■□ 21.5
KLHDC4-226ENST00000569747 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
KLHDC4-226ENST00000569747 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
KLHDC4-226ENST00000569747 MROH2AA6NES4 1674 aa21.87■■□□□ 1.09
KLHDC4-226ENST00000569747 UHRF1BP1Q6BDS2 1440 aa21.86■■□□□ 1.09
KLHDC4-226ENST00000569747 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
KLHDC4-226ENST00000569747 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
KLHDC4-226ENST00000569747 A2MP01023 1474 aa21.84■■□□□ 1.09
KLHDC4-226ENST00000569747 FBXO41Q8TF61 875 aa21.84■■□□□ 1.09
KLHDC4-226ENST00000569747 STRCQ7RTU9 1775 aa21.84■■□□□ 1.09
KLHDC4-226ENST00000569747 NCOA2Q15596 1464 aa21.83■■□□□ 1.09
KLHDC4-226ENST00000569747 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
KLHDC4-226ENST00000569747 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
KLHDC4-226ENST00000569747 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
KLHDC4-226ENST00000569747 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
KLHDC4-226ENST00000569747 NPATQ14207 1427 aa21.78■■□□□ 1.08
KLHDC4-226ENST00000569747 CLTCQ00610 1675 aaKnown RBP21.78■■□□□ 1.08
KLHDC4-226ENST00000569747 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
KLHDC4-226ENST00000569747 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
KLHDC4-226ENST00000569747 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
KLHDC4-226ENST00000569747 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
KLHDC4-226ENST00000569747 ZMYM3Q14202 1370 aa21.74■■□□□ 1.07
KLHDC4-226ENST00000569747 MAP3K1Q13233 1512 aa21.72■■□□□ 1.07
KLHDC4-226ENST00000569747 ARHGEF5Q12774 1597 aa21.72■■□□□ 1.07
KLHDC4-226ENST00000569747 ZNF142P52746 1687 aaPredicted RBP21.7■■□□□ 1.06
KLHDC4-226ENST00000569747 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
KLHDC4-226ENST00000569747 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
KLHDC4-226ENST00000569747 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
KLHDC4-226ENST00000569747 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
KLHDC4-226ENST00000569747 PTPRTO14522 1441 aa21.68■■□□□ 1.06
KLHDC4-226ENST00000569747 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
KLHDC4-226ENST00000569747 CERKQ8TCT0 537 aa21.67■■□□□ 1.06
KLHDC4-226ENST00000569747 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
KLHDC4-226ENST00000569747 GGT6Q6P531 493 aa21.66■■□□□ 1.06
KLHDC4-226ENST00000569747 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
KLHDC4-226ENST00000569747 RSPH4AQ5TD94 716 aa21.65■■□□□ 1.06
KLHDC4-226ENST00000569747 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
KLHDC4-226ENST00000569747 CEP170BQ9Y4F5 1589 aaPredicted RBP21.63■■□□□ 1.05
KLHDC4-226ENST00000569747 MAST1Q9Y2H9 1570 aa21.62■■□□□ 1.05
KLHDC4-226ENST00000569747 KDM5DQ9BY66 1539 aa21.61■■□□□ 1.05
KLHDC4-226ENST00000569747 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
KLHDC4-226ENST00000569747 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
KLHDC4-226ENST00000569747 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms