RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.45
MSLN-208ENST00000569566 POGZQ7Z3K3 1410 aa30.39■■■□□ 2.45
MSLN-208ENST00000569566 CCDC18Q5T9S5 1454 aa30.38■■■□□ 2.45
MSLN-208ENST00000569566 FYCO1Q9BQS8 1478 aa30.38■■■□□ 2.45
MSLN-208ENST00000569566 RIMS1Q86UR5 1692 aaKnown RBP30.38■■■□□ 2.45
MSLN-208ENST00000569566 YEATS2Q9ULM3 1422 aa30.33■■■□□ 2.45
MSLN-208ENST00000569566 KDM5CP41229 1560 aa30.32■■■□□ 2.45
MSLN-208ENST00000569566 ITSN2Q9NZM3 1697 aa30.32■■■□□ 2.44
MSLN-208ENST00000569566 CLIP1P30622 1438 aa30.31■■■□□ 2.44
MSLN-208ENST00000569566 ARHGAP5Q13017 1502 aa30.31■■■□□ 2.44
MSLN-208ENST00000569566 PTPRMP28827 1452 aa30.31■■■□□ 2.44
MSLN-208ENST00000569566 FER1L4A9Z1Z3 1794 aa30.31■■■□□ 2.44
MSLN-208ENST00000569566 MAGI2Q86UL8 1455 aa30.3■■■□□ 2.44
MSLN-208ENST00000569566 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
MSLN-208ENST00000569566 SCAPERQ9BY12 1400 aa30.27■■■□□ 2.44
MSLN-208ENST00000569566 ABCC1P33527 1531 aa30.27■■■□□ 2.44
MSLN-208ENST00000569566 ABCA6Q8N139 1617 aa30.22■■■□□ 2.43
MSLN-208ENST00000569566 DIP2CQ9Y2E4 1556 aa30.2■■■□□ 2.43
MSLN-208ENST00000569566 ZNF518AQ6AHZ1 1483 aa30.2■■■□□ 2.43
MSLN-208ENST00000569566 CDK11AQ9UQ88 783 aaPredicted RBP30.2■■■□□ 2.43
MSLN-208ENST00000569566 SAMD9LQ8IVG5 1584 aa30.15■■■□□ 2.42
MSLN-208ENST00000569566 REREQ9P2R6 1566 aa30.14■■■□□ 2.42
MSLN-208ENST00000569566 ARHGEF12Q9NZN5 1544 aa30.12■■■□□ 2.41
MSLN-208ENST00000569566 KIDINS220Q9ULH0 1771 aa30.12■■■□□ 2.41
MSLN-208ENST00000569566 C9orf84Q5VXU9 1444 aa30.12■■■□□ 2.41
MSLN-208ENST00000569566 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
MSLN-208ENST00000569566 ATP10AO60312 1499 aa30.08■■■□□ 2.41
MSLN-208ENST00000569566 LMTK3Q96Q04 1460 aa30.08■■■□□ 2.41
MSLN-208ENST00000569566 ARID4BQ4LE39 1312 aaPredicted RBP30.08■■■□□ 2.41
MSLN-208ENST00000569566 SYCP2Q9BX26 1530 aa30.05■■■□□ 2.4
MSLN-208ENST00000569566 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
MSLN-208ENST00000569566 TIAM1Q13009 1591 aa30.03■■■□□ 2.4
MSLN-208ENST00000569566 MLH3Q9UHC1 1453 aa30.03■■■□□ 2.4
MSLN-208ENST00000569566 TRAPPC8Q9Y2L5 1435 aa30.03■■■□□ 2.4
MSLN-208ENST00000569566 EHBP1L1Q8N3D4 1523 aa30.02■■■□□ 2.4
MSLN-208ENST00000569566 GPATCH8Q9UKJ3 1502 aaKnown RBP30■■■□□ 2.39
MSLN-208ENST00000569566 INO80Q9ULG1 1556 aaPredicted RBP29.99■■■□□ 2.39
MSLN-208ENST00000569566 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
MSLN-208ENST00000569566 AGLP35573 1532 aa29.94■■■□□ 2.38
MSLN-208ENST00000569566 C3P01024 1663 aa29.94■■■□□ 2.38
MSLN-208ENST00000569566 AFAP1Q8N556 730 aa29.93■■■□□ 2.38
MSLN-208ENST00000569566 ATP7AQ04656 1500 aa29.89■■■□□ 2.38
MSLN-208ENST00000569566 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
MSLN-208ENST00000569566 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
MSLN-208ENST00000569566 MTUS2Q5JR59 1369 aa29.86■■■□□ 2.37
MSLN-208ENST00000569566 MLECQ14165 292 aa29.84■■■□□ 2.37
MSLN-208ENST00000569566 MROH2AA6NES4 1674 aa29.83■■■□□ 2.37
MSLN-208ENST00000569566 ADGBQ8N7X0 1667 aa29.83■■■□□ 2.37
MSLN-208ENST00000569566 PLEKHH2Q8IVE3 1493 aa29.83■■■□□ 2.37
MSLN-208ENST00000569566 KIAA1107Q9UPP5 1409 aa29.8■■■□□ 2.36
MSLN-208ENST00000569566 CCNB3Q8WWL7 1395 aa29.79■■■□□ 2.36
MSLN-208ENST00000569566 SETD1BQ9UPS6 1966 aaKnown RBP29.77■■■□□ 2.36
MSLN-208ENST00000569566 VPS8Q8N3P4 1428 aa29.73■■■□□ 2.35
MSLN-208ENST00000569566 NCOA2Q15596 1464 aa29.73■■■□□ 2.35
MSLN-208ENST00000569566 CLTCQ00610 1675 aaKnown RBP29.72■■■□□ 2.35
MSLN-208ENST00000569566 STRCQ7RTU9 1775 aa29.72■■■□□ 2.35
MSLN-208ENST00000569566 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
MSLN-208ENST00000569566 MBD5Q9P267 1494 aa29.71■■■□□ 2.35
MSLN-208ENST00000569566 PLPPR3Q6T4P5 718 aa29.7■■■□□ 2.35
MSLN-208ENST00000569566 ILDR1Q86SU0 546 aaPredicted RBP29.7■■■□□ 2.35
MSLN-208ENST00000569566 MYT1LQ9UL68 1186 aa29.69■■■□□ 2.34
MSLN-208ENST00000569566 CAMSAP2Q08AD1 1489 aa29.68■■■□□ 2.34
MSLN-208ENST00000569566 CFDP1Q9UEE9 299 aaPredicted RBP29.67■■■□□ 2.34
MSLN-208ENST00000569566 HNRNPMP52272 730 aaKnown RBP eCLIP29.65■■■□□ 2.34
MSLN-208ENST00000569566 HSPA2P54652 639 aa29.65■■■□□ 2.34
MSLN-208ENST00000569566 A2MP01023 1474 aa29.65■■■□□ 2.34
MSLN-208ENST00000569566 SPAG9O60271 1321 aaKnown RBP29.64■■■□□ 2.34
MSLN-208ENST00000569566 ZNF142P52746 1687 aaPredicted RBP29.63■■■□□ 2.33
MSLN-208ENST00000569566 LRRC9Q6ZRR7 1453 aa29.62■■■□□ 2.33
MSLN-208ENST00000569566 ARHGEF5Q12774 1597 aa29.62■■■□□ 2.33
MSLN-208ENST00000569566 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
MSLN-208ENST00000569566 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
MSLN-208ENST00000569566 ZNF644Q9H582 1327 aaPredicted RBP29.61■■■□□ 2.33
MSLN-208ENST00000569566 CCDC141Q6ZP82 1450 aa29.6■■■□□ 2.33
MSLN-208ENST00000569566 MAP3K1Q13233 1512 aa29.6■■■□□ 2.33
MSLN-208ENST00000569566 MYO3AQ8NEV4 1616 aa29.6■■■□□ 2.33
MSLN-208ENST00000569566 UHRF1BP1Q6BDS2 1440 aa29.59■■■□□ 2.33
MSLN-208ENST00000569566 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
MSLN-208ENST00000569566 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
MSLN-208ENST00000569566 CROCC2H7BZ55 1655 aa29.51■■■□□ 2.31
MSLN-208ENST00000569566 MAST1Q9Y2H9 1570 aa29.51■■■□□ 2.31
MSLN-208ENST00000569566 NPATQ14207 1427 aa29.49■■■□□ 2.31
MSLN-208ENST00000569566 RNF17Q9BXT8 1623 aaKnown RBP29.45■■■□□ 2.3
MSLN-208ENST00000569566 FAM135AQ9P2D6 1515 aa29.45■■■□□ 2.3
MSLN-208ENST00000569566 CEP170BQ9Y4F5 1589 aaPredicted RBP29.43■■■□□ 2.3
MSLN-208ENST00000569566 EIF2AK4Q9P2K8 1649 aaKnown RBP29.41■■■□□ 2.3
MSLN-208ENST00000569566 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
MSLN-208ENST00000569566 PTPRKQ15262 1439 aa29.39■■■□□ 2.3
MSLN-208ENST00000569566 MYOM3Q5VTT5 1437 aa29.39■■■□□ 2.3
MSLN-208ENST00000569566 CAMSAP1Q5T5Y3 1602 aa29.39■■■□□ 2.3
MSLN-208ENST00000569566 ZMYM3Q14202 1370 aa29.39■■■□□ 2.29
MSLN-208ENST00000569566 NCOA1Q15788 1441 aa29.38■■■□□ 2.29
MSLN-208ENST00000569566 ESF1Q9H501 851 aaKnown RBP29.38■■■□□ 2.29
MSLN-208ENST00000569566 ZC3H13Q5T200 1668 aaKnown RBP29.37■■■□□ 2.29
MSLN-208ENST00000569566 MROH1Q8NDA8 1641 aa29.37■■■□□ 2.29
MSLN-208ENST00000569566 DHX29Q7Z478 1369 aaKnown RBP29.37■■■□□ 2.29
MSLN-208ENST00000569566 KANK4Q5T7N3 995 aaPredicted RBP29.35■■■□□ 2.29
MSLN-208ENST00000569566 FBXO41Q8TF61 875 aa29.35■■■□□ 2.29
MSLN-208ENST00000569566 MIA2Q96PC5 1412 aa29.34■■■□□ 2.29
MSLN-208ENST00000569566 PTPN23Q9H3S7 1636 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms