RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
VAC14-211ENST00000568886 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
VAC14-211ENST00000568886 CFAP74Q9C0B2 1584 aa23.5■■□□□ 1.35
VAC14-211ENST00000568886 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
VAC14-211ENST00000568886 NEO1Q92859 1461 aa23.5■■□□□ 1.35
VAC14-211ENST00000568886 CDC42BPBQ9Y5S2 1711 aa23.49■■□□□ 1.35
VAC14-211ENST00000568886 MYOM3Q5VTT5 1437 aa23.49■■□□□ 1.35
VAC14-211ENST00000568886 MIA2Q96PC5 1412 aa23.47■■□□□ 1.35
VAC14-211ENST00000568886 ARHGAP5Q13017 1502 aa23.47■■□□□ 1.35
VAC14-211ENST00000568886 FANCAO15360 1455 aa23.47■■□□□ 1.35
VAC14-211ENST00000568886 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
VAC14-211ENST00000568886 TSPOAP1O95153 1857 aa23.45■■□□□ 1.35
VAC14-211ENST00000568886 CFDP1Q9UEE9 299 aaPredicted RBP23.43■■□□□ 1.34
VAC14-211ENST00000568886 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
VAC14-211ENST00000568886 PLEKHH2Q8IVE3 1493 aa23.4■■□□□ 1.34
VAC14-211ENST00000568886 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
VAC14-211ENST00000568886 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
VAC14-211ENST00000568886 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
VAC14-211ENST00000568886 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
VAC14-211ENST00000568886 ABCC1P33527 1531 aa23.36■■□□□ 1.33
VAC14-211ENST00000568886 ADGRL1O94910 1474 aa23.35■■□□□ 1.33
VAC14-211ENST00000568886 CAMSAP2Q08AD1 1489 aa23.34■■□□□ 1.33
VAC14-211ENST00000568886 PTPN23Q9H3S7 1636 aa23.34■■□□□ 1.33
VAC14-211ENST00000568886 RRBP1Q9P2E9 1410 aaKnown RBP23.32■■□□□ 1.32
VAC14-211ENST00000568886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.31■■□□□ 1.32
VAC14-211ENST00000568886 SCAPERQ9BY12 1400 aa23.3■■□□□ 1.32
VAC14-211ENST00000568886 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
VAC14-211ENST00000568886 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
VAC14-211ENST00000568886 ARHGEF5Q12774 1597 aa23.28■■□□□ 1.32
VAC14-211ENST00000568886 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
VAC14-211ENST00000568886 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
VAC14-211ENST00000568886 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
VAC14-211ENST00000568886 POGZQ7Z3K3 1410 aa23.27■■□□□ 1.32
VAC14-211ENST00000568886 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
VAC14-211ENST00000568886 RSPH4AQ5TD94 716 aa23.27■■□□□ 1.32
VAC14-211ENST00000568886 KDM6BO15054 1643 aa23.26■■□□□ 1.31
VAC14-211ENST00000568886 ZNF518AQ6AHZ1 1483 aa23.25■■□□□ 1.31
VAC14-211ENST00000568886 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
VAC14-211ENST00000568886 RICTORQ6R327 1708 aa23.24■■□□□ 1.31
VAC14-211ENST00000568886 KDM5CP41229 1560 aa23.23■■□□□ 1.31
VAC14-211ENST00000568886 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
VAC14-211ENST00000568886 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
VAC14-211ENST00000568886 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
VAC14-211ENST00000568886 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
VAC14-211ENST00000568886 HNRNPMP52272 730 aaKnown RBP eCLIP23.2■■□□□ 1.3
VAC14-211ENST00000568886 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
VAC14-211ENST00000568886 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
VAC14-211ENST00000568886 SHANK2Q9UPX8 1470 aa23.17■■□□□ 1.3
VAC14-211ENST00000568886 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
VAC14-211ENST00000568886 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
VAC14-211ENST00000568886 RAPGEF3O95398 923 aa23.16■■□□□ 1.3
VAC14-211ENST00000568886 DAPK1P53355 1430 aa23.16■■□□□ 1.3
VAC14-211ENST00000568886 MAST1Q9Y2H9 1570 aa23.15■■□□□ 1.3
VAC14-211ENST00000568886 ABCC5O15440 1437 aa23.15■■□□□ 1.3
VAC14-211ENST00000568886 RTEL1-TNFRSF6BF6WH68 1400 aa23.15■■□□□ 1.3
VAC14-211ENST00000568886 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
VAC14-211ENST00000568886 AFAP1Q8N556 730 aa23.14■■□□□ 1.3
VAC14-211ENST00000568886 HECW2Q9P2P5 1572 aa23.13■■□□□ 1.29
VAC14-211ENST00000568886 INO80Q9ULG1 1556 aaPredicted RBP23.12■■□□□ 1.29
VAC14-211ENST00000568886 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
VAC14-211ENST00000568886 TSPY4P0CV99 314 aa23.1■■□□□ 1.29
VAC14-211ENST00000568886 TSPY10P0CW01 314 aa23.1■■□□□ 1.29
VAC14-211ENST00000568886 SPAG9O60271 1321 aaKnown RBP23.1■■□□□ 1.29
VAC14-211ENST00000568886 ATP7AQ04656 1500 aa23.09■■□□□ 1.29
VAC14-211ENST00000568886 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
VAC14-211ENST00000568886 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
VAC14-211ENST00000568886 ARHGEF40Q8TER5 1519 aa23.06■■□□□ 1.28
VAC14-211ENST00000568886 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
VAC14-211ENST00000568886 PLXNC1O60486 1568 aa23.05■■□□□ 1.28
VAC14-211ENST00000568886 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
VAC14-211ENST00000568886 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
VAC14-211ENST00000568886 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
VAC14-211ENST00000568886 DIP2CQ9Y2E4 1556 aa23.02■■□□□ 1.27
VAC14-211ENST00000568886 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
VAC14-211ENST00000568886 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
VAC14-211ENST00000568886 ABCA6Q8N139 1617 aa23.01■■□□□ 1.27
VAC14-211ENST00000568886 ANKRD30AQ9BXX3 1397 aa23■■□□□ 1.27
VAC14-211ENST00000568886 ATP10AO60312 1499 aa22.99■■□□□ 1.27
VAC14-211ENST00000568886 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
VAC14-211ENST00000568886 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
VAC14-211ENST00000568886 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
VAC14-211ENST00000568886 DUOX2Q9NRD8 1548 aa22.94■■□□□ 1.26
VAC14-211ENST00000568886 A2MP01023 1474 aa22.93■■□□□ 1.26
VAC14-211ENST00000568886 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
VAC14-211ENST00000568886 ITGAEP38570 1179 aa22.93■■□□□ 1.26
VAC14-211ENST00000568886 CHIC2Q9UKJ5 165 aa22.93■■□□□ 1.26
VAC14-211ENST00000568886 DHX29Q7Z478 1369 aaKnown RBP22.92■■□□□ 1.26
VAC14-211ENST00000568886 AGLP35573 1532 aa22.91■■□□□ 1.26
VAC14-211ENST00000568886 ERBINQ96RT1 1412 aa22.9■■□□□ 1.26
VAC14-211ENST00000568886 HFM1A2PYH4 1435 aa22.89■■□□□ 1.26
VAC14-211ENST00000568886 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
VAC14-211ENST00000568886 BCORL1Q5H9F3 1711 aa22.88■■□□□ 1.25
VAC14-211ENST00000568886 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
VAC14-211ENST00000568886 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
VAC14-211ENST00000568886 NAIPQ13075 1403 aa22.85■■□□□ 1.25
VAC14-211ENST00000568886 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
VAC14-211ENST00000568886 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
VAC14-211ENST00000568886 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
VAC14-211ENST00000568886 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
VAC14-211ENST00000568886 SETD5Q9C0A6 1442 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms