RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 CFAP74Q9C0B2 1584 aa15.76■□□□□ 0.11
HERPUD1-216ENST00000568814 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
HERPUD1-216ENST00000568814 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
HERPUD1-216ENST00000568814 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
HERPUD1-216ENST00000568814 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-216ENST00000568814 MIA2Q96PC5 1412 aa15.74■□□□□ 0.11
HERPUD1-216ENST00000568814 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
HERPUD1-216ENST00000568814 FANCAO15360 1455 aa15.72■□□□□ 0.11
HERPUD1-216ENST00000568814 NEO1Q92859 1461 aa15.72■□□□□ 0.11
HERPUD1-216ENST00000568814 EFCAB2Q5VUJ9 269 aa15.72■□□□□ 0.11
HERPUD1-216ENST00000568814 CFDP1Q9UEE9 299 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-216ENST00000568814 PPRC1Q5VV67 1664 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-216ENST00000568814 TSPOAP1O95153 1857 aa15.71■□□□□ 0.11
HERPUD1-216ENST00000568814 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
HERPUD1-216ENST00000568814 PLEKHH2Q8IVE3 1493 aa15.7■□□□□ 0.1
HERPUD1-216ENST00000568814 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
HERPUD1-216ENST00000568814 PTPN23Q9H3S7 1636 aa15.67■□□□□ 0.1
HERPUD1-216ENST00000568814 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
HERPUD1-216ENST00000568814 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
HERPUD1-216ENST00000568814 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-216ENST00000568814 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
HERPUD1-216ENST00000568814 RRBP1Q9P2E9 1410 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-216ENST00000568814 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
HERPUD1-216ENST00000568814 ABCC1P33527 1531 aa15.65■□□□□ 0.1
HERPUD1-216ENST00000568814 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-216ENST00000568814 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
HERPUD1-216ENST00000568814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.63■□□□□ 0.09
HERPUD1-216ENST00000568814 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
HERPUD1-216ENST00000568814 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
HERPUD1-216ENST00000568814 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
HERPUD1-216ENST00000568814 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-216ENST00000568814 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
HERPUD1-216ENST00000568814 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
HERPUD1-216ENST00000568814 RSPH4AQ5TD94 716 aa15.59■□□□□ 0.09
HERPUD1-216ENST00000568814 POGZQ7Z3K3 1410 aa15.59■□□□□ 0.09
HERPUD1-216ENST00000568814 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
HERPUD1-216ENST00000568814 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
HERPUD1-216ENST00000568814 MBD5Q9P267 1494 aa15.58■□□□□ 0.08
HERPUD1-216ENST00000568814 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
HERPUD1-216ENST00000568814 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-216ENST00000568814 RICTORQ6R327 1708 aa15.55■□□□□ 0.08
HERPUD1-216ENST00000568814 KDM5CP41229 1560 aa15.54■□□□□ 0.08
HERPUD1-216ENST00000568814 SHANK2Q9UPX8 1470 aa15.54■□□□□ 0.08
HERPUD1-216ENST00000568814 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
HERPUD1-216ENST00000568814 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
HERPUD1-216ENST00000568814 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
HERPUD1-216ENST00000568814 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
HERPUD1-216ENST00000568814 DAPK1P53355 1430 aa15.53■□□□□ 0.08
HERPUD1-216ENST00000568814 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
HERPUD1-216ENST00000568814 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.07
HERPUD1-216ENST00000568814 ABCC5O15440 1437 aa15.51■□□□□ 0.07
HERPUD1-216ENST00000568814 MAST1Q9Y2H9 1570 aa15.51■□□□□ 0.07
HERPUD1-216ENST00000568814 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
HERPUD1-216ENST00000568814 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
HERPUD1-216ENST00000568814 MAGI2Q86UL8 1455 aa15.5■□□□□ 0.07
HERPUD1-216ENST00000568814 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
HERPUD1-216ENST00000568814 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
HERPUD1-216ENST00000568814 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
HERPUD1-216ENST00000568814 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-216ENST00000568814 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-216ENST00000568814 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
HERPUD1-216ENST00000568814 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
HERPUD1-216ENST00000568814 FBXO41Q8TF61 875 aa15.49■□□□□ 0.07
HERPUD1-216ENST00000568814 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
HERPUD1-216ENST00000568814 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
HERPUD1-216ENST00000568814 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-216ENST00000568814 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
HERPUD1-216ENST00000568814 ADGRL2O95490 1459 aa15.46■□□□□ 0.06
HERPUD1-216ENST00000568814 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
HERPUD1-216ENST00000568814 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
HERPUD1-216ENST00000568814 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
HERPUD1-216ENST00000568814 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
HERPUD1-216ENST00000568814 ITGAEP38570 1179 aa15.44■□□□□ 0.06
HERPUD1-216ENST00000568814 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
HERPUD1-216ENST00000568814 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
HERPUD1-216ENST00000568814 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
HERPUD1-216ENST00000568814 ABCA6Q8N139 1617 aa15.41■□□□□ 0.06
HERPUD1-216ENST00000568814 NCOA1Q15788 1441 aa15.41■□□□□ 0.06
HERPUD1-216ENST00000568814 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
HERPUD1-216ENST00000568814 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
HERPUD1-216ENST00000568814 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
HERPUD1-216ENST00000568814 YEATS2Q9ULM3 1422 aa15.4■□□□□ 0.06
HERPUD1-216ENST00000568814 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
HERPUD1-216ENST00000568814 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
HERPUD1-216ENST00000568814 ATP10AO60312 1499 aa15.39■□□□□ 0.05
HERPUD1-216ENST00000568814 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
HERPUD1-216ENST00000568814 HFM1A2PYH4 1435 aa15.37■□□□□ 0.05
HERPUD1-216ENST00000568814 GCC2Q8IWJ2 1684 aa15.37■□□□□ 0.05
HERPUD1-216ENST00000568814 A2MP01023 1474 aa15.36■□□□□ 0.05
HERPUD1-216ENST00000568814 ERBINQ96RT1 1412 aa15.35■□□□□ 0.05
HERPUD1-216ENST00000568814 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
HERPUD1-216ENST00000568814 DHX29Q7Z478 1369 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-216ENST00000568814 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-216ENST00000568814 NAIPQ13075 1403 aa15.34■□□□□ 0.05
HERPUD1-216ENST00000568814 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
HERPUD1-216ENST00000568814 AGLP35573 1532 aa15.33■□□□□ 0.04
HERPUD1-216ENST00000568814 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
HERPUD1-216ENST00000568814 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
HERPUD1-216ENST00000568814 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-216ENST00000568814 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms