RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 RAPGEF3O95398 923 aa21.18■□□□□ 0.98
PKM-220ENST00000568459 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
PKM-220ENST00000568459 CFAP74Q9C0B2 1584 aa21.17■□□□□ 0.98
PKM-220ENST00000568459 FANCAO15360 1455 aa21.17■□□□□ 0.98
PKM-220ENST00000568459 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
PKM-220ENST00000568459 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
PKM-220ENST00000568459 AKNAQ7Z591 1439 aa21.15■□□□□ 0.98
PKM-220ENST00000568459 ADGRL1O94910 1474 aa21.14■□□□□ 0.97
PKM-220ENST00000568459 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
PKM-220ENST00000568459 PLCH2O75038 1416 aa21.13■□□□□ 0.97
PKM-220ENST00000568459 KIF14Q15058 1648 aa21.13■□□□□ 0.97
PKM-220ENST00000568459 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
PKM-220ENST00000568459 MIER1Q8N108 512 aa21.12■□□□□ 0.97
PKM-220ENST00000568459 DENND4BO75064 1496 aaPredicted RBP21.11■□□□□ 0.97
PKM-220ENST00000568459 RRBP1Q9P2E9 1410 aaKnown RBP21.11■□□□□ 0.97
PKM-220ENST00000568459 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
PKM-220ENST00000568459 DHX57Q6P158 1386 aaKnown RBP21.08■□□□□ 0.97
PKM-220ENST00000568459 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
PKM-220ENST00000568459 RICTORQ6R327 1708 aa21.07■□□□□ 0.96
PKM-220ENST00000568459 SCAPERQ9BY12 1400 aa21.03■□□□□ 0.96
PKM-220ENST00000568459 ARHGAP5Q13017 1502 aa21.02■□□□□ 0.96
PKM-220ENST00000568459 CDC42BPBQ9Y5S2 1711 aa20.99■□□□□ 0.95
PKM-220ENST00000568459 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
PKM-220ENST00000568459 MAP3K1Q13233 1512 aa20.98■□□□□ 0.95
PKM-220ENST00000568459 ZMYM4Q5VZL5 1548 aa20.98■□□□□ 0.95
PKM-220ENST00000568459 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
PKM-220ENST00000568459 MAGI2Q86UL8 1455 aa20.96■□□□□ 0.95
PKM-220ENST00000568459 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
PKM-220ENST00000568459 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
PKM-220ENST00000568459 ZFYVE16Q7Z3T8 1539 aa20.94■□□□□ 0.94
PKM-220ENST00000568459 CDC42BPAQ5VT25 1732 aa20.94■□□□□ 0.94
PKM-220ENST00000568459 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
PKM-220ENST00000568459 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
PKM-220ENST00000568459 YEATS2Q9ULM3 1422 aa20.91■□□□□ 0.94
PKM-220ENST00000568459 ZNF518AQ6AHZ1 1483 aa20.91■□□□□ 0.94
PKM-220ENST00000568459 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
PKM-220ENST00000568459 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
PKM-220ENST00000568459 BCORL1Q5H9F3 1711 aa20.89■□□□□ 0.94
PKM-220ENST00000568459 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.93
PKM-220ENST00000568459 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
PKM-220ENST00000568459 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
PKM-220ENST00000568459 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
PKM-220ENST00000568459 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
PKM-220ENST00000568459 ATP10AO60312 1499 aa20.85■□□□□ 0.93
PKM-220ENST00000568459 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
PKM-220ENST00000568459 ABCC1P33527 1531 aa20.85■□□□□ 0.93
PKM-220ENST00000568459 KDM5CP41229 1560 aa20.84■□□□□ 0.93
PKM-220ENST00000568459 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
PKM-220ENST00000568459 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
PKM-220ENST00000568459 ARHGEF12Q9NZN5 1544 aa20.82■□□□□ 0.92
PKM-220ENST00000568459 TRAPPC8Q9Y2L5 1435 aa20.82■□□□□ 0.92
PKM-220ENST00000568459 HECW2Q9P2P5 1572 aa20.81■□□□□ 0.92
PKM-220ENST00000568459 PTPRMP28827 1452 aa20.81■□□□□ 0.92
PKM-220ENST00000568459 C9orf84Q5VXU9 1444 aa20.81■□□□□ 0.92
PKM-220ENST00000568459 MADDQ8WXG6 1647 aa20.81■□□□□ 0.92
PKM-220ENST00000568459 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
PKM-220ENST00000568459 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
PKM-220ENST00000568459 MLH3Q9UHC1 1453 aa20.79■□□□□ 0.92
PKM-220ENST00000568459 MLECQ14165 292 aa20.79■□□□□ 0.92
PKM-220ENST00000568459 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.92
PKM-220ENST00000568459 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
PKM-220ENST00000568459 TIAM1Q13009 1591 aa20.77■□□□□ 0.92
PKM-220ENST00000568459 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.91
PKM-220ENST00000568459 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
PKM-220ENST00000568459 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
PKM-220ENST00000568459 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
PKM-220ENST00000568459 DIP2CQ9Y2E4 1556 aa20.74■□□□□ 0.91
PKM-220ENST00000568459 KIDINS220Q9ULH0 1771 aa20.73■□□□□ 0.91
PKM-220ENST00000568459 SPAG9O60271 1321 aaKnown RBP20.73■□□□□ 0.91
PKM-220ENST00000568459 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
PKM-220ENST00000568459 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
PKM-220ENST00000568459 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
PKM-220ENST00000568459 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
PKM-220ENST00000568459 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
PKM-220ENST00000568459 ZNF644Q9H582 1327 aaPredicted RBP20.7■□□□□ 0.9
PKM-220ENST00000568459 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
PKM-220ENST00000568459 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
PKM-220ENST00000568459 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
PKM-220ENST00000568459 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
PKM-220ENST00000568459 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
PKM-220ENST00000568459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.65■□□□□ 0.95e-8■□□□□ 8.5
PKM-220ENST00000568459 AGLP35573 1532 aa20.65■□□□□ 0.9
PKM-220ENST00000568459 ATP7AQ04656 1500 aa20.65■□□□□ 0.9
PKM-220ENST00000568459 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
PKM-220ENST00000568459 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
PKM-220ENST00000568459 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
PKM-220ENST00000568459 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
PKM-220ENST00000568459 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
PKM-220ENST00000568459 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
PKM-220ENST00000568459 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
PKM-220ENST00000568459 A2MP01023 1474 aa20.57■□□□□ 0.88
PKM-220ENST00000568459 RTEL1-TNFRSF6BF6WH68 1400 aa20.57■□□□□ 0.88
PKM-220ENST00000568459 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
PKM-220ENST00000568459 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
PKM-220ENST00000568459 LMTK3Q96Q04 1460 aa20.55■□□□□ 0.88
PKM-220ENST00000568459 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
PKM-220ENST00000568459 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
PKM-220ENST00000568459 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
PKM-220ENST00000568459 MIA2Q96PC5 1412 aa20.52■□□□□ 0.88
PKM-220ENST00000568459 CNTLNQ9NXG0 1405 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms