RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
SCAPER-220ENST00000568428 SNPHO15079 494 aa12.37□□□□□ -0.43
SCAPER-220ENST00000568428 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
SCAPER-220ENST00000568428 KIF3CO14782 793 aa12.32□□□□□ -0.44
SCAPER-220ENST00000568428 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
SCAPER-220ENST00000568428 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
SCAPER-220ENST00000568428 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
SCAPER-220ENST00000568428 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
SCAPER-220ENST00000568428 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
SCAPER-220ENST00000568428 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
SCAPER-220ENST00000568428 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
SCAPER-220ENST00000568428 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
SCAPER-220ENST00000568428 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
SCAPER-220ENST00000568428 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
SCAPER-220ENST00000568428 FOXK1P85037 733 aa12.15□□□□□ -0.46
SCAPER-220ENST00000568428 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
SCAPER-220ENST00000568428 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
SCAPER-220ENST00000568428 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
SCAPER-220ENST00000568428 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
SCAPER-220ENST00000568428 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
SCAPER-220ENST00000568428 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
SCAPER-220ENST00000568428 EMP3P54852 163 aa12.12□□□□□ -0.47
SCAPER-220ENST00000568428 DSG2Q14126 1118 aa12.12□□□□□ -0.47
SCAPER-220ENST00000568428 SLC34A2O95436 690 aa12.11□□□□□ -0.47
SCAPER-220ENST00000568428 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
SCAPER-220ENST00000568428 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
SCAPER-220ENST00000568428 PDE4AP27815 886 aa12.09□□□□□ -0.47
SCAPER-220ENST00000568428 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
SCAPER-220ENST00000568428 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
SCAPER-220ENST00000568428 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
SCAPER-220ENST00000568428 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
SCAPER-220ENST00000568428 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
SCAPER-220ENST00000568428 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
SCAPER-220ENST00000568428 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
SCAPER-220ENST00000568428 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCAPER-220ENST00000568428 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
SCAPER-220ENST00000568428 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
SCAPER-220ENST00000568428 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
SCAPER-220ENST00000568428 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
SCAPER-220ENST00000568428 MFSD10Q14728 455 aa12.02□□□□□ -0.49
SCAPER-220ENST00000568428 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
SCAPER-220ENST00000568428 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
SCAPER-220ENST00000568428 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
SCAPER-220ENST00000568428 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
SCAPER-220ENST00000568428 ERBB3P21860 1342 aa11.97□□□□□ -0.49
SCAPER-220ENST00000568428 NUDT7P0C024 238 aa11.96□□□□□ -0.49
SCAPER-220ENST00000568428 OXER1Q8TDS5 423 aa11.96□□□□□ -0.49
SCAPER-220ENST00000568428 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
SCAPER-220ENST00000568428 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
SCAPER-220ENST00000568428 TBC1D12O60347 775 aa11.91□□□□□ -0.5
SCAPER-220ENST00000568428 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
SCAPER-220ENST00000568428 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
SCAPER-220ENST00000568428 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCAPER-220ENST00000568428 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
SCAPER-220ENST00000568428 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
SCAPER-220ENST00000568428 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
SCAPER-220ENST00000568428 ZNF687Q8N1G0 1237 aa11.87□□□□□ -0.51
SCAPER-220ENST00000568428 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
SCAPER-220ENST00000568428 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
SCAPER-220ENST00000568428 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
SCAPER-220ENST00000568428 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
SCAPER-220ENST00000568428 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
SCAPER-220ENST00000568428 EVI5O60447 810 aa11.79□□□□□ -0.52
SCAPER-220ENST00000568428 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
SCAPER-220ENST00000568428 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
SCAPER-220ENST00000568428 E2F4Q16254 413 aa11.75□□□□□ -0.53
SCAPER-220ENST00000568428 DPYSL4O14531 572 aa11.73□□□□□ -0.53
SCAPER-220ENST00000568428 PBX2P40425 430 aa11.71□□□□□ -0.53
SCAPER-220ENST00000568428 FOSBP53539 338 aa11.71□□□□□ -0.53
SCAPER-220ENST00000568428 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
SCAPER-220ENST00000568428 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
SCAPER-220ENST00000568428 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
SCAPER-220ENST00000568428 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
SCAPER-220ENST00000568428 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
SCAPER-220ENST00000568428 ARHGAP33O14559 1287 aa11.67□□□□□ -0.54
SCAPER-220ENST00000568428 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCAPER-220ENST00000568428 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
SCAPER-220ENST00000568428 PTGER2P43116 358 aa11.64□□□□□ -0.55
SCAPER-220ENST00000568428 PSEN2P49810 448 aa11.64□□□□□ -0.55
SCAPER-220ENST00000568428 PDIA6Q15084 440 aa11.64□□□□□ -0.55
SCAPER-220ENST00000568428 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
SCAPER-220ENST00000568428 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
SCAPER-220ENST00000568428 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
SCAPER-220ENST00000568428 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
SCAPER-220ENST00000568428 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
SCAPER-220ENST00000568428 SPDYE16A6NNV3 312 aaPredicted RBP11.62□□□□□ -0.55
SCAPER-220ENST00000568428 PHF14O94880 888 aa11.61□□□□□ -0.55
SCAPER-220ENST00000568428 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
SCAPER-220ENST00000568428 ADAM33Q9BZ11 813 aa11.61□□□□□ -0.55
SCAPER-220ENST00000568428 HAP1P54257 671 aaPredicted RBP11.59□□□□□ -0.55
SCAPER-220ENST00000568428 KCNK17Q96T54 332 aa11.58□□□□□ -0.56
SCAPER-220ENST00000568428 TYW1BQ6NUM6 668 aa11.57□□□□□ -0.56
SCAPER-220ENST00000568428 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
SCAPER-220ENST00000568428 DDX12PQ92771 950 aa11.57□□□□□ -0.56
SCAPER-220ENST00000568428 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
SCAPER-220ENST00000568428 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
SCAPER-220ENST00000568428 EPAS1Q99814 870 aa11.56□□□□□ -0.56
SCAPER-220ENST00000568428 TK2O00142 265 aa11.55□□□□□ -0.56
SCAPER-220ENST00000568428 PTPREP23469 700 aa11.55□□□□□ -0.56
SCAPER-220ENST00000568428 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms