RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
CNOT1-213ENST00000568158 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
CNOT1-213ENST00000568158 APLP2Q06481 763 aa20.47■□□□□ 0.87
CNOT1-213ENST00000568158 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
CNOT1-213ENST00000568158 SCAPERQ9BY12 1400 aa20.46■□□□□ 0.87
CNOT1-213ENST00000568158 ZNF777Q9ULD5 760 aaPredicted RBP20.46■□□□□ 0.87
CNOT1-213ENST00000568158 DENND4BO75064 1496 aaPredicted RBP20.45■□□□□ 0.86
CNOT1-213ENST00000568158 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
CNOT1-213ENST00000568158 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
CNOT1-213ENST00000568158 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
CNOT1-213ENST00000568158 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
CNOT1-213ENST00000568158 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
CNOT1-213ENST00000568158 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
CNOT1-213ENST00000568158 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
CNOT1-213ENST00000568158 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
CNOT1-213ENST00000568158 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
CNOT1-213ENST00000568158 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
CNOT1-213ENST00000568158 PREX2Q70Z35 1606 aa20.41■□□□□ 0.86
CNOT1-213ENST00000568158 FRMPD1Q5SYB0 1578 aa20.38■□□□□ 0.85
CNOT1-213ENST00000568158 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
CNOT1-213ENST00000568158 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.85
CNOT1-213ENST00000568158 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
CNOT1-213ENST00000568158 RICTORQ6R327 1708 aa20.37■□□□□ 0.85
CNOT1-213ENST00000568158 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
CNOT1-213ENST00000568158 ARHGEF12Q9NZN5 1544 aa20.35■□□□□ 0.85
CNOT1-213ENST00000568158 KDM4FA0A1W2PPD8 638 aa20.33■□□□□ 0.85
CNOT1-213ENST00000568158 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
CNOT1-213ENST00000568158 POGZQ7Z3K3 1410 aa20.33■□□□□ 0.84
CNOT1-213ENST00000568158 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.84
CNOT1-213ENST00000568158 SAMD9LQ8IVG5 1584 aa20.31■□□□□ 0.84
CNOT1-213ENST00000568158 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
CNOT1-213ENST00000568158 ABCC1P33527 1531 aa20.29■□□□□ 0.84
CNOT1-213ENST00000568158 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
CNOT1-213ENST00000568158 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
CNOT1-213ENST00000568158 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
CNOT1-213ENST00000568158 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
CNOT1-213ENST00000568158 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
CNOT1-213ENST00000568158 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
CNOT1-213ENST00000568158 SYCP2Q9BX26 1530 aa20.25■□□□□ 0.83
CNOT1-213ENST00000568158 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
CNOT1-213ENST00000568158 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
CNOT1-213ENST00000568158 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
CNOT1-213ENST00000568158 KDM5CP41229 1560 aa20.22■□□□□ 0.83
CNOT1-213ENST00000568158 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
CNOT1-213ENST00000568158 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
CNOT1-213ENST00000568158 ATP10AO60312 1499 aa20.2■□□□□ 0.82
CNOT1-213ENST00000568158 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
CNOT1-213ENST00000568158 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
CNOT1-213ENST00000568158 ARHGEF40Q8TER5 1519 aa20.19■□□□□ 0.82
CNOT1-213ENST00000568158 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
CNOT1-213ENST00000568158 MLECQ14165 292 aa20.17■□□□□ 0.82
CNOT1-213ENST00000568158 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
CNOT1-213ENST00000568158 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
CNOT1-213ENST00000568158 RSPH4AQ5TD94 716 aa20.16■□□□□ 0.82
CNOT1-213ENST00000568158 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
CNOT1-213ENST00000568158 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
CNOT1-213ENST00000568158 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
CNOT1-213ENST00000568158 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
CNOT1-213ENST00000568158 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
CNOT1-213ENST00000568158 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
CNOT1-213ENST00000568158 ABCA6Q8N139 1617 aa20.12■□□□□ 0.81
CNOT1-213ENST00000568158 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
CNOT1-213ENST00000568158 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
CNOT1-213ENST00000568158 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
CNOT1-213ENST00000568158 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
CNOT1-213ENST00000568158 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
CNOT1-213ENST00000568158 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
CNOT1-213ENST00000568158 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
CNOT1-213ENST00000568158 ARHGEF5Q12774 1597 aa20.07■□□□□ 0.8
CNOT1-213ENST00000568158 ADAMTSL3P82987 1691 aa20.07■□□□□ 0.8
CNOT1-213ENST00000568158 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
CNOT1-213ENST00000568158 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
CNOT1-213ENST00000568158 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
CNOT1-213ENST00000568158 A2MP01023 1474 aa20.03■□□□□ 0.8
CNOT1-213ENST00000568158 ABCC5O15440 1437 aa20.02■□□□□ 0.8
CNOT1-213ENST00000568158 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
CNOT1-213ENST00000568158 REREQ9P2R6 1566 aa20.02■□□□□ 0.8
CNOT1-213ENST00000568158 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
CNOT1-213ENST00000568158 MADDQ8WXG6 1647 aa20.01■□□□□ 0.79
CNOT1-213ENST00000568158 DHX29Q7Z478 1369 aaKnown RBP20■□□□□ 0.79
CNOT1-213ENST00000568158 AGLP35573 1532 aa20■□□□□ 0.79
CNOT1-213ENST00000568158 GGT6Q6P531 493 aa19.99■□□□□ 0.79
CNOT1-213ENST00000568158 DAPK1P53355 1430 aa19.98■□□□□ 0.79
CNOT1-213ENST00000568158 PTPRMP28827 1452 aa19.98■□□□□ 0.79
CNOT1-213ENST00000568158 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
CNOT1-213ENST00000568158 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
CNOT1-213ENST00000568158 ADGBQ8N7X0 1667 aa19.97■□□□□ 0.79
CNOT1-213ENST00000568158 KIF3BO15066 747 aa19.96■□□□□ 0.79
CNOT1-213ENST00000568158 CEBPAP49715 358 aaPredicted RBP19.96■□□□□ 0.79
CNOT1-213ENST00000568158 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
CNOT1-213ENST00000568158 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
CNOT1-213ENST00000568158 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
CNOT1-213ENST00000568158 PLXNC1O60486 1568 aa19.93■□□□□ 0.78
CNOT1-213ENST00000568158 ITGAEP38570 1179 aa19.93■□□□□ 0.78
CNOT1-213ENST00000568158 FER1L4A9Z1Z3 1794 aa19.93■□□□□ 0.78
CNOT1-213ENST00000568158 CROCC2H7BZ55 1655 aa19.9■□□□□ 0.78
CNOT1-213ENST00000568158 PTPRKQ15262 1439 aa19.89■□□□□ 0.77
CNOT1-213ENST00000568158 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
CNOT1-213ENST00000568158 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
CNOT1-213ENST00000568158 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms