RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 ZMYM4Q5VZL5 1548 aa23.92■■□□□ 1.42
GSE1-213ENST00000568080 ZFYVE16Q7Z3T8 1539 aa23.92■■□□□ 1.42
GSE1-213ENST00000568080 POGZQ7Z3K3 1410 aa23.91■■□□□ 1.42
GSE1-213ENST00000568080 BCORL1Q5H9F3 1711 aa23.9■■□□□ 1.42
GSE1-213ENST00000568080 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.42
GSE1-213ENST00000568080 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
GSE1-213ENST00000568080 HECW2Q9P2P5 1572 aa23.86■■□□□ 1.41
GSE1-213ENST00000568080 YEATS2Q9ULM3 1422 aa23.86■■□□□ 1.41
GSE1-213ENST00000568080 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
GSE1-213ENST00000568080 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
GSE1-213ENST00000568080 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
GSE1-213ENST00000568080 PTPRMP28827 1452 aa23.83■■□□□ 1.41
GSE1-213ENST00000568080 PREX2Q70Z35 1606 aa23.83■■□□□ 1.41
GSE1-213ENST00000568080 ZNF518AQ6AHZ1 1483 aa23.82■■□□□ 1.4
GSE1-213ENST00000568080 CEP162Q5TB80 1403 aa23.81■■□□□ 1.4
GSE1-213ENST00000568080 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
GSE1-213ENST00000568080 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
GSE1-213ENST00000568080 MLECQ14165 292 aa23.78■■□□□ 1.4
GSE1-213ENST00000568080 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
GSE1-213ENST00000568080 ATP10AO60312 1499 aa23.77■■□□□ 1.4
GSE1-213ENST00000568080 SIGLEC1Q9BZZ2 1709 aa23.76■■□□□ 1.39
GSE1-213ENST00000568080 C9orf84Q5VXU9 1444 aa23.76■■□□□ 1.39
GSE1-213ENST00000568080 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
GSE1-213ENST00000568080 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
GSE1-213ENST00000568080 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
GSE1-213ENST00000568080 ABCC1P33527 1531 aa23.74■■□□□ 1.39
GSE1-213ENST00000568080 KDM5CP41229 1560 aa23.74■■□□□ 1.39
GSE1-213ENST00000568080 ITSN2Q9NZM3 1697 aa23.72■■□□□ 1.39
GSE1-213ENST00000568080 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
GSE1-213ENST00000568080 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
GSE1-213ENST00000568080 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
GSE1-213ENST00000568080 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
GSE1-213ENST00000568080 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
GSE1-213ENST00000568080 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
GSE1-213ENST00000568080 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
GSE1-213ENST00000568080 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
GSE1-213ENST00000568080 DIP2CQ9Y2E4 1556 aa23.65■■□□□ 1.38
GSE1-213ENST00000568080 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
GSE1-213ENST00000568080 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
GSE1-213ENST00000568080 ABCA6Q8N139 1617 aa23.64■■□□□ 1.38
GSE1-213ENST00000568080 SYCP2Q9BX26 1530 aa23.63■■□□□ 1.37
GSE1-213ENST00000568080 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
GSE1-213ENST00000568080 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
GSE1-213ENST00000568080 REREQ9P2R6 1566 aa23.59■■□□□ 1.37
GSE1-213ENST00000568080 KIDINS220Q9ULH0 1771 aa23.59■■□□□ 1.37
GSE1-213ENST00000568080 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
GSE1-213ENST00000568080 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
GSE1-213ENST00000568080 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
GSE1-213ENST00000568080 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
GSE1-213ENST00000568080 KIAA1107Q9UPP5 1409 aa23.56■■□□□ 1.36
GSE1-213ENST00000568080 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
GSE1-213ENST00000568080 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
GSE1-213ENST00000568080 AGLP35573 1532 aa23.52■■□□□ 1.36
GSE1-213ENST00000568080 CEBPAP49715 358 aaPredicted RBP23.51■■□□□ 1.35
GSE1-213ENST00000568080 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
GSE1-213ENST00000568080 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
GSE1-213ENST00000568080 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
GSE1-213ENST00000568080 HSPA2P54652 639 aa23.49■■□□□ 1.35
GSE1-213ENST00000568080 INO80Q9ULG1 1556 aaPredicted RBP23.47■■□□□ 1.35
GSE1-213ENST00000568080 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
GSE1-213ENST00000568080 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
GSE1-213ENST00000568080 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
GSE1-213ENST00000568080 A2MP01023 1474 aa23.42■■□□□ 1.34
GSE1-213ENST00000568080 C3P01024 1663 aa23.41■■□□□ 1.34
GSE1-213ENST00000568080 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
GSE1-213ENST00000568080 SETD1BQ9UPS6 1966 aaKnown RBP23.4■■□□□ 1.34
GSE1-213ENST00000568080 CAMSAP2Q08AD1 1489 aa23.4■■□□□ 1.34
GSE1-213ENST00000568080 ADGBQ8N7X0 1667 aa23.4■■□□□ 1.34
GSE1-213ENST00000568080 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
GSE1-213ENST00000568080 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
GSE1-213ENST00000568080 PLXNC1O60486 1568 aa23.37■■□□□ 1.33
GSE1-213ENST00000568080 APLP2Q06481 763 aa23.37■■□□□ 1.33
GSE1-213ENST00000568080 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
GSE1-213ENST00000568080 GGT6Q6P531 493 aa23.36■■□□□ 1.33
GSE1-213ENST00000568080 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
GSE1-213ENST00000568080 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
GSE1-213ENST00000568080 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
GSE1-213ENST00000568080 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
GSE1-213ENST00000568080 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
GSE1-213ENST00000568080 CLTCQ00610 1675 aaKnown RBP23.32■■□□□ 1.32
GSE1-213ENST00000568080 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
GSE1-213ENST00000568080 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
GSE1-213ENST00000568080 ZMYM3Q14202 1370 aa23.29■■□□□ 1.32
GSE1-213ENST00000568080 DHX29Q7Z478 1369 aaKnown RBP23.28■■□□□ 1.32
GSE1-213ENST00000568080 ARHGEF5Q12774 1597 aa23.28■■□□□ 1.32
GSE1-213ENST00000568080 MYOM3Q5VTT5 1437 aa23.25■■□□□ 1.31
GSE1-213ENST00000568080 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
GSE1-213ENST00000568080 KIF3BO15066 747 aa23.24■■□□□ 1.31
GSE1-213ENST00000568080 NPATQ14207 1427 aa23.24■■□□□ 1.31
GSE1-213ENST00000568080 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
GSE1-213ENST00000568080 MIA2Q96PC5 1412 aa23.23■■□□□ 1.31
GSE1-213ENST00000568080 STRCQ7RTU9 1775 aa23.21■■□□□ 1.31
GSE1-213ENST00000568080 FBXO41Q8TF61 875 aa23.2■■□□□ 1.3
GSE1-213ENST00000568080 MAST1Q9Y2H9 1570 aa23.16■■□□□ 1.3
GSE1-213ENST00000568080 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
GSE1-213ENST00000568080 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
GSE1-213ENST00000568080 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
GSE1-213ENST00000568080 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
GSE1-213ENST00000568080 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
GSE1-213ENST00000568080 CAMSAP1Q5T5Y3 1602 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms