RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
GINS3-209ENST00000567909 MAP3K1Q13233 1512 aa20■□□□□ 0.79
GINS3-209ENST00000567909 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
GINS3-209ENST00000567909 RAPGEF3O95398 923 aa19.98■□□□□ 0.79
GINS3-209ENST00000567909 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
GINS3-209ENST00000567909 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
GINS3-209ENST00000567909 ADGRL1O94910 1474 aa19.97■□□□□ 0.79
GINS3-209ENST00000567909 GPATCH8Q9UKJ3 1502 aaKnown RBP19.96■□□□□ 0.79
GINS3-209ENST00000567909 DENND4BO75064 1496 aaPredicted RBP19.95■□□□□ 0.78
GINS3-209ENST00000567909 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
GINS3-209ENST00000567909 ITSN2Q9NZM3 1697 aa19.94■□□□□ 0.78
GINS3-209ENST00000567909 RICTORQ6R327 1708 aa19.94■□□□□ 0.78
GINS3-209ENST00000567909 ZNF777Q9ULD5 760 aaPredicted RBP19.94■□□□□ 0.78
GINS3-209ENST00000567909 FRMPD1Q5SYB0 1578 aa19.94■□□□□ 0.78
GINS3-209ENST00000567909 SCAPERQ9BY12 1400 aa19.93■□□□□ 0.78
GINS3-209ENST00000567909 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
GINS3-209ENST00000567909 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.77
GINS3-209ENST00000567909 ABCC1P33527 1531 aa19.88■□□□□ 0.77
GINS3-209ENST00000567909 POGZQ7Z3K3 1410 aa19.88■□□□□ 0.77
GINS3-209ENST00000567909 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
GINS3-209ENST00000567909 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
GINS3-209ENST00000567909 ZMYM4Q5VZL5 1548 aa19.83■□□□□ 0.77
GINS3-209ENST00000567909 AFAP1Q8N556 730 aa19.83■□□□□ 0.77
GINS3-209ENST00000567909 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
GINS3-209ENST00000567909 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
GINS3-209ENST00000567909 TRAPPC8Q9Y2L5 1435 aa19.82■□□□□ 0.76
GINS3-209ENST00000567909 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
GINS3-209ENST00000567909 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.76
GINS3-209ENST00000567909 MYT1LQ9UL68 1186 aa19.81■□□□□ 0.76
GINS3-209ENST00000567909 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
GINS3-209ENST00000567909 ARHGEF40Q8TER5 1519 aa19.8■□□□□ 0.76
GINS3-209ENST00000567909 KDM5CP41229 1560 aa19.78■□□□□ 0.76
GINS3-209ENST00000567909 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
GINS3-209ENST00000567909 CAMSAP2Q08AD1 1489 aa19.78■□□□□ 0.76
GINS3-209ENST00000567909 YEATS2Q9ULM3 1422 aa19.77■□□□□ 0.76
GINS3-209ENST00000567909 KIAA1107Q9UPP5 1409 aa19.77■□□□□ 0.76
GINS3-209ENST00000567909 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
GINS3-209ENST00000567909 MAGI2Q86UL8 1455 aa19.77■□□□□ 0.76
GINS3-209ENST00000567909 HECW2Q9P2P5 1572 aa19.77■□□□□ 0.76
GINS3-209ENST00000567909 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
GINS3-209ENST00000567909 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
GINS3-209ENST00000567909 MBD5Q9P267 1494 aa19.71■□□□□ 0.75
GINS3-209ENST00000567909 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
GINS3-209ENST00000567909 SPAG9O60271 1321 aaKnown RBP19.71■□□□□ 0.75
GINS3-209ENST00000567909 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
GINS3-209ENST00000567909 ABCA6Q8N139 1617 aa19.7■□□□□ 0.74
GINS3-209ENST00000567909 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
GINS3-209ENST00000567909 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
GINS3-209ENST00000567909 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
GINS3-209ENST00000567909 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
GINS3-209ENST00000567909 ATP10AO60312 1499 aa19.68■□□□□ 0.74
GINS3-209ENST00000567909 CCDC141Q6ZP82 1450 aa19.68■□□□□ 0.74
GINS3-209ENST00000567909 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
GINS3-209ENST00000567909 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
GINS3-209ENST00000567909 KDM4FA0A1W2PPD8 638 aa19.67■□□□□ 0.74
GINS3-209ENST00000567909 C9orf84Q5VXU9 1444 aa19.67■□□□□ 0.74
GINS3-209ENST00000567909 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
GINS3-209ENST00000567909 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
GINS3-209ENST00000567909 BCORL1Q5H9F3 1711 aa19.64■□□□□ 0.73
GINS3-209ENST00000567909 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
GINS3-209ENST00000567909 TSPY4P0CV99 314 aa19.61■□□□□ 0.73
GINS3-209ENST00000567909 TSPY10P0CW01 314 aa19.61■□□□□ 0.73
GINS3-209ENST00000567909 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
GINS3-209ENST00000567909 MLECQ14165 292 aa19.6■□□□□ 0.73
GINS3-209ENST00000567909 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
GINS3-209ENST00000567909 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
GINS3-209ENST00000567909 REREQ9P2R6 1566 aa19.59■□□□□ 0.73
GINS3-209ENST00000567909 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
GINS3-209ENST00000567909 CROCC2H7BZ55 1655 aa19.59■□□□□ 0.73
GINS3-209ENST00000567909 ADAMTSL3P82987 1691 aa19.59■□□□□ 0.73
GINS3-209ENST00000567909 DNMT1P26358 1616 aaKnown RBP19.57■□□□□ 0.72
GINS3-209ENST00000567909 MADDQ8WXG6 1647 aa19.56■□□□□ 0.72
GINS3-209ENST00000567909 MAST1Q9Y2H9 1570 aa19.56■□□□□ 0.72
GINS3-209ENST00000567909 A2MP01023 1474 aa19.55■□□□□ 0.72
GINS3-209ENST00000567909 ABCC5O15440 1437 aa19.55■□□□□ 0.72
GINS3-209ENST00000567909 DAPK1P53355 1430 aa19.54■□□□□ 0.72
GINS3-209ENST00000567909 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
GINS3-209ENST00000567909 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
GINS3-209ENST00000567909 AGLP35573 1532 aa19.53■□□□□ 0.72
GINS3-209ENST00000567909 PLXNC1O60486 1568 aa19.52■□□□□ 0.71
GINS3-209ENST00000567909 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
GINS3-209ENST00000567909 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
GINS3-209ENST00000567909 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
GINS3-209ENST00000567909 ITGAEP38570 1179 aa19.46■□□□□ 0.71
GINS3-209ENST00000567909 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
GINS3-209ENST00000567909 PTPRMP28827 1452 aa19.46■□□□□ 0.71
GINS3-209ENST00000567909 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
GINS3-209ENST00000567909 KIF3BO15066 747 aa19.44■□□□□ 0.7
GINS3-209ENST00000567909 GGT6Q6P531 493 aa19.44■□□□□ 0.7
GINS3-209ENST00000567909 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
GINS3-209ENST00000567909 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
GINS3-209ENST00000567909 RRBP1Q9P2E9 1410 aaKnown RBP19.43■□□□□ 0.7
GINS3-209ENST00000567909 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
GINS3-209ENST00000567909 DUOX2Q9NRD8 1548 aa19.42■□□□□ 0.7
GINS3-209ENST00000567909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.7
GINS3-209ENST00000567909 PTPRKQ15262 1439 aa19.41■□□□□ 0.7
GINS3-209ENST00000567909 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
GINS3-209ENST00000567909 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
GINS3-209ENST00000567909 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
GINS3-209ENST00000567909 EIF2AK4Q9P2K8 1649 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms